Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1947

Experiment: m.b. Polymyxin B sulfate 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Polymyxin B sulfate 1 mg/ml
2,287,986	+		Echvi_1945	0.65	+0.2
2,288,209	-				+0.5
2,288,564	-		Echvi_1946	0.53	+0.1
2,288,597	+		Echvi_1946	0.58	+1.1
2,288,608	-		Echvi_1946	0.60	-0.1
2,288,678	+		Echvi_1946	0.70	-0.2
2,288,738	+		Echvi_1946	0.79	-1.0
2,288,739	-		Echvi_1946	0.79	-0.1
2,288,739	-		Echvi_1946	0.79	+0.6
2,288,868	+				+0.2
2,288,869	-				+1.6
2,288,869	-				+0.3
2,288,992	-				+0.9
2,289,062	+				+0.2
2,289,199	+		Echvi_1947	0.13	-0.3
2,289,199	+		Echvi_1947	0.13	+0.6
2,289,247	+		Echvi_1947	0.15	-0.8
2,289,248	-		Echvi_1947	0.15	+2.0
2,289,257	+		Echvi_1947	0.15	+1.2
2,289,419	+		Echvi_1947	0.22	-0.2
2,289,420	-		Echvi_1947	0.22	+2.8
2,289,561	+		Echvi_1947	0.27	+0.3
2,289,579	+		Echvi_1947	0.28	-1.5
2,289,579	+		Echvi_1947	0.28	-0.9
2,289,599	+		Echvi_1947	0.29	-0.7
2,289,704	+		Echvi_1947	0.33	+1.2
2,289,704	+		Echvi_1947	0.33	-0.4
2,289,715	-		Echvi_1947	0.34	+2.1
2,289,747	+		Echvi_1947	0.35	-0.3
2,289,748	-		Echvi_1947	0.35	+2.5
2,289,888	+		Echvi_1947	0.41	+1.1
2,289,892	+		Echvi_1947	0.41	-1.2
2,289,893	-		Echvi_1947	0.41	+3.8
2,289,893	-		Echvi_1947	0.41	+1.5
2,289,893	-		Echvi_1947	0.41	+2.3
2,289,893	-		Echvi_1947	0.41	+2.6
2,289,897	+		Echvi_1947	0.41	+1.2
2,289,898	-		Echvi_1947	0.41	+2.2
2,289,979	-		Echvi_1947	0.44	+1.8
2,289,979	-		Echvi_1947	0.44	+1.0
2,290,060	-		Echvi_1947	0.48	+2.3
2,290,159	-		Echvi_1947	0.52	+0.4
2,290,204	+		Echvi_1947	0.53	+1.1
2,290,204	+		Echvi_1947	0.53	-2.9
2,290,548	-		Echvi_1947	0.67	+0.9
2,290,551	+		Echvi_1947	0.67	-0.4
2,290,560	+		Echvi_1947	0.68	-1.0
2,290,560	+		Echvi_1947	0.68	-0.7
2,290,561	-		Echvi_1947	0.68	+1.1
2,290,561	-		Echvi_1947	0.68	+1.2
2,290,564	+		Echvi_1947	0.68	-2.0
2,290,699	-		Echvi_1947	0.73	+3.3
2,290,710	+		Echvi_1947	0.74	-1.1
2,290,711	-		Echvi_1947	0.74	+1.8
2,290,754	+		Echvi_1947	0.76	+0.4
2,290,789	-		Echvi_1947	0.77	+2.9
2,291,016	+		Echvi_1947	0.86	+0.2
2,291,016	+		Echvi_1947	0.86	+0.1
2,291,017	-		Echvi_1947	0.86	+1.6
2,291,017	-		Echvi_1947	0.86	-0.4
2,291,188	+				+0.6
2,291,205	+				-1.6
2,291,205	+				-1.8
2,291,206	-				+1.5
2,291,229	-				-1.2
2,291,305	-				+1.1
2,291,452	+		Echvi_1948	0.33	+1.6
2,291,456	+		Echvi_1948	0.35	+0.4
2,291,457	-		Echvi_1948	0.35	+3.3
2,291,501	+		Echvi_1948	0.48	+0.4
2,291,502	-		Echvi_1948	0.49	+2.4
2,291,602	+		Echvi_1948	0.79	-1.2
2,291,602	+		Echvi_1948	0.79	-1.8
2,291,686	+				-1.0
2,291,780	+		Echvi_1949	0.25	+0.6
2,291,782	+		Echvi_1949	0.26	+0.7
2,291,783	-		Echvi_1949	0.26	+2.3
2,291,956	-		Echvi_1949	0.64	+2.4
2,291,986	+		Echvi_1949	0.71	+0.8
2,292,047	+		Echvi_1949	0.84	-0.4
2,292,047	+		Echvi_1949	0.84	-0.0
2,292,052	+		Echvi_1949	0.85	+0.7
2,292,053	-		Echvi_1949	0.85	+2.3
2,292,054	+		Echvi_1949	0.86	-2.4
2,292,054	+		Echvi_1949	0.86	-0.8
2,292,054	+		Echvi_1949	0.86	+0.1
2,292,054	+		Echvi_1949	0.86	-1.9
2,292,054	+		Echvi_1949	0.86	+1.2
2,292,055	-		Echvi_1949	0.86	+2.9
2,292,055	-		Echvi_1949	0.86	+2.5
2,292,119	-				+2.6
2,292,124	-				+0.8
2,292,244	+		Echvi_1950	0.37	-0.0
2,292,291	+		Echvi_1950	0.52	-0.4
2,292,291	+		Echvi_1950	0.52	-0.4
2,292,291	+		Echvi_1950	0.52	-0.1