Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1925

Experiment: m.b. Polymyxin B sulfate 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Polymyxin B sulfate 1 mg/ml
2,267,917	-		Echvi_1924	0.73	-0.4
2,267,956	-		Echvi_1924	0.75	+0.2
2,268,008	+		Echvi_1924	0.76	-0.2
2,268,008	+		Echvi_1924	0.76	+0.2
2,268,009	-		Echvi_1924	0.76	-2.0
2,268,009	-		Echvi_1924	0.76	+0.2
2,268,273	-		Echvi_1924	0.84	+0.6
2,268,308	+		Echvi_1924	0.85	+0.2
2,268,308	+		Echvi_1924	0.85	+0.0
2,268,458	-		Echvi_1924	0.89	+1.8
2,268,458	-		Echvi_1924	0.89	+0.0
2,268,509	+				+1.5
2,268,510	-				-0.5
2,268,510	-				+1.0
2,268,595	+				-0.4
2,268,651	+				-0.0
2,268,652	-				-0.7
2,268,652	-				+0.3
2,268,654	+				-1.1
2,268,683	+				+0.6
2,268,684	-				-0.6
2,268,795	-				-0.9
2,268,795	-				+0.5
2,268,851	-				-0.7
2,268,874	+				+0.6
2,268,874	+				+0.1
2,268,874	+				+3.0
2,268,875	-				-1.3
2,268,901	+				+0.3
2,268,902	-				+0.4
2,268,908	+				-1.3
2,268,929	-				-0.7
2,268,932	+				-0.2
2,268,933	-				-1.5
2,268,959	+				+0.4
2,268,960	-				-2.6
2,269,257	+		Echvi_1925	0.40	-0.7
2,269,301	+		Echvi_1925	0.45	-2.3
2,269,302	-		Echvi_1925	0.45	-0.8
2,269,430	+		Echvi_1925	0.58	+0.2
2,269,430	+		Echvi_1925	0.58	-2.0
2,269,431	-		Echvi_1925	0.59	-0.5
2,269,431	-		Echvi_1925	0.59	+1.6
2,269,631	+		Echvi_1925	0.80	-0.1
2,269,729	+				+0.6
2,269,729	+				-0.2
2,269,730	-				+0.4
2,269,749	-				+0.8
2,269,837	-				-0.1
2,269,851	-				-0.9
2,269,879	+				-1.1
2,269,912	-				-0.8
2,269,912	-				-1.1
2,269,912	-				-0.5
2,269,916	+				-1.5
2,269,916	+				+1.5
2,269,928	-				+0.9
2,269,944	+				+0.6
2,269,949	+				-1.8
2,269,949	+				+0.7
2,269,950	-				+0.0
2,270,126	-		Echvi_1926	0.36	-1.7
2,270,152	+		Echvi_1926	0.41	+1.3
2,270,152	+		Echvi_1926	0.41	-0.7
2,270,153	-		Echvi_1926	0.41	-0.3
2,270,153	-		Echvi_1926	0.41	-0.0
2,270,153	-		Echvi_1926	0.41	-0.4
2,270,153	-		Echvi_1926	0.41	-0.8
2,270,153	-		Echvi_1926	0.41	-0.9
2,270,270	+		Echvi_1926	0.61	-0.1
2,270,271	-		Echvi_1926	0.61	-0.1
2,270,271	-		Echvi_1926	0.61	+0.6
2,270,368	+		Echvi_1926	0.78	+0.3
2,270,368	+		Echvi_1926	0.78	-0.8
2,270,368	+		Echvi_1926	0.78	-0.3
2,270,369	-		Echvi_1926	0.78	-0.3
2,270,369	-		Echvi_1926	0.78	+0.2
2,270,369	-		Echvi_1926	0.78	-0.4
2,270,374	-		Echvi_1926	0.79	-1.0
2,270,375	+		Echvi_1926	0.79	+0.5
2,270,375	+		Echvi_1926	0.79	-0.4
2,270,375	+		Echvi_1926	0.79	+0.4
2,270,375	+		Echvi_1926	0.79	-0.5
2,270,376	-		Echvi_1926	0.79	+0.1
2,270,376	-		Echvi_1926	0.79	-1.1
2,270,376	-		Echvi_1926	0.79	+0.0
2,270,381	+		Echvi_1926	0.80	+0.6
2,270,381	+		Echvi_1926	0.80	-1.1
2,270,382	-		Echvi_1926	0.80	-2.5
2,270,382	-		Echvi_1926	0.80	-0.2
2,270,388	-		Echvi_1926	0.81	+0.3
2,270,447	-				-1.4
2,270,458	+				+0.3
2,270,459	-				-0.3
2,270,459	-				-1.0
2,270,473	+				-0.6
2,270,475	+				-1.0
2,270,476	-				+0.6
2,270,476	-				-0.2
2,270,503	-				-0.2
2,270,503	-				-1.3
2,270,520	+				-0.9
2,270,521	-				-1.2
2,270,563	+				-0.2
2,270,699	+				-0.1
2,270,700	-				-0.1
2,270,785	+				+0.8