Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1770

Experiment: m.b. Polymyxin B sulfate 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Polymyxin B sulfate 1 mg/ml
2,078,266	+				-1.3
2,078,362	+				-0.2
2,078,398	+				-0.4
2,078,446	+				-0.4
2,078,447	-				+0.1
2,078,447	-				+1.2
2,078,449	+				-0.9
2,078,465	+		Echvi_1769	0.10	+1.3
2,078,596	+		Echvi_1769	0.28	-1.1
2,078,635	-		Echvi_1769	0.33	+1.3
2,078,814	-		Echvi_1769	0.58	+1.0
2,078,814	-		Echvi_1769	0.58	-2.1
2,078,814	-		Echvi_1769	0.58	-1.5
2,078,814	-		Echvi_1769	0.58	+1.0
2,078,815	+		Echvi_1769	0.58	+0.2
2,078,815	+		Echvi_1769	0.58	-1.4
2,078,816	-		Echvi_1769	0.58	+0.1
2,078,816	-		Echvi_1769	0.58	+0.6
2,078,889	+		Echvi_1769	0.68	-0.1
2,078,897	-		Echvi_1769	0.69	-0.6
2,078,934	+		Echvi_1769	0.74	-0.3
2,078,934	+		Echvi_1769	0.74	+0.6
2,078,951	+		Echvi_1769	0.76	+1.4
2,078,951	+		Echvi_1769	0.76	-0.2
2,079,093	+				+0.1
2,079,093	+				+0.4
2,079,093	+				-0.7
2,079,094	-				-0.9
2,079,098	-				+1.9
2,079,113	+				+0.2
2,079,113	+				+0.3
2,079,113	+				+0.9
2,079,113	+				-0.0
2,079,113	+				-0.4
2,079,113	+				+0.1
2,079,113	+				-0.1
2,079,113	+				-1.0
2,079,114	-				+0.6
2,079,114	-				+0.1
2,079,114	-				+2.2
2,079,114	-				-0.3
2,079,114	-				+0.4
2,079,114	-				+0.6
2,079,114	-				+0.3
2,079,114	-				+0.6
2,079,114	-				+0.4
2,079,114	-				-0.1
2,079,114	-				+0.7
2,079,115	+				-0.2
2,079,115	+				-0.6
2,079,116	-				+0.3
2,079,116	-				-1.4
2,079,116	-				+1.2
2,079,146	+				-0.4
2,079,146	+				-2.2
2,079,146	+				+0.2
2,079,147	-				-0.0
2,079,147	-				-0.1
2,079,147	-				-0.1
2,079,147	-				-1.2
2,079,147	-				+0.0
2,079,175	-				+0.2
2,079,175	-				-0.8
2,079,188	+				+0.5
2,079,188	+				+0.9
2,079,188	+				+0.8
2,079,629	+		Echvi_1770	0.26	+0.6
2,079,630	-		Echvi_1770	0.26	+0.6
2,079,630	-		Echvi_1770	0.26	-0.5
2,079,691	-		Echvi_1770	0.30	+1.3
2,079,736	-		Echvi_1770	0.33	+0.3
2,079,844	+		Echvi_1770	0.40	+1.2
2,079,844	+		Echvi_1770	0.40	-0.1
2,079,845	-		Echvi_1770	0.40	+0.9
2,079,845	-		Echvi_1770	0.40	+0.6
2,079,845	-		Echvi_1770	0.40	+1.7
2,079,845	-		Echvi_1770	0.40	+1.0
2,079,933	-		Echvi_1770	0.46	+2.3
2,079,949	+		Echvi_1770	0.47	+0.3
2,079,950	-		Echvi_1770	0.47	-0.6
2,080,069	+		Echvi_1770	0.55	+0.3
2,080,071	+		Echvi_1770	0.55	+0.2
2,080,071	+		Echvi_1770	0.55	+0.7
2,080,089	+		Echvi_1770	0.56	+0.1
2,080,089	+		Echvi_1770	0.56	-1.8
2,080,090	-		Echvi_1770	0.56	+1.1
2,080,123	-		Echvi_1770	0.59	+0.9
2,080,131	+		Echvi_1770	0.59	+0.7
2,080,132	-		Echvi_1770	0.59	-0.5
2,080,296	+		Echvi_1770	0.70	+1.1
2,080,297	-		Echvi_1770	0.70	+0.7
2,080,297	-		Echvi_1770	0.70	-0.6
2,080,297	-		Echvi_1770	0.70	+2.1
2,080,404	-		Echvi_1770	0.77	+0.6
2,080,408	+		Echvi_1770	0.78	-0.6
2,080,418	+		Echvi_1770	0.78	+0.3
2,080,418	+		Echvi_1770	0.78	-1.2
2,080,419	-		Echvi_1770	0.78	+0.2
2,080,505	+		Echvi_1770	0.84	-1.4
2,080,634	+				-0.3
2,080,692	-				-0.4
2,080,692	-				+0.6
2,080,733	+				+0.0
2,080,746	+				-0.6
2,080,746	+				-0.6
2,080,746	+				-0.3
2,080,746	+				+0.0
2,080,746	+				+0.1
2,080,747	-				+0.1
2,080,747	-				-0.5
2,080,747	-				+1.3
2,080,747	-				-0.6
2,080,747	-				+3.1
2,080,803	+				+1.1
2,080,927	+		Echvi_1771	0.11	+1.5
2,080,927	+		Echvi_1771	0.11	-1.1
2,080,928	-		Echvi_1771	0.11	+0.9
2,080,928	-		Echvi_1771	0.11	-0.7
2,080,928	-		Echvi_1771	0.11	+1.4
2,080,929	+		Echvi_1771	0.11	-0.5
2,080,929	+		Echvi_1771	0.11	-0.2
2,080,929	+		Echvi_1771	0.11	+0.3
2,080,929	+		Echvi_1771	0.11	+1.7
2,080,929	+		Echvi_1771	0.11	+0.1
2,080,929	+		Echvi_1771	0.11	+0.4
2,080,930	-		Echvi_1771	0.11	+1.4
2,080,980	-		Echvi_1771	0.15	+0.1
2,081,010	-		Echvi_1771	0.17	-0.4
2,081,083	+		Echvi_1771	0.21	-1.1
2,081,083	+		Echvi_1771	0.21	+0.0
2,081,088	+		Echvi_1771	0.22	-0.6
2,081,088	+		Echvi_1771	0.22	-2.1
2,081,089	-		Echvi_1771	0.22	+1.2
2,081,263	-		Echvi_1771	0.33	+0.6
2,081,263	-		Echvi_1771	0.33	+0.2
2,081,263	-		Echvi_1771	0.33	-0.1
2,081,266	+		Echvi_1771	0.33	-0.5
2,081,366	+		Echvi_1771	0.39	+0.6
2,081,366	+		Echvi_1771	0.39	-0.3
2,081,366	+		Echvi_1771	0.39	-0.6
2,081,367	-		Echvi_1771	0.39	+1.6
2,081,491	+		Echvi_1771	0.47	+0.7
2,081,569	+		Echvi_1771	0.52	-2.4
2,081,570	-		Echvi_1771	0.52	-0.6
2,081,654	-		Echvi_1771	0.58	-1.6
2,081,678	+		Echvi_1771	0.59	+0.9
2,081,678	+		Echvi_1771	0.59	-0.1
2,081,720	-		Echvi_1771	0.62	+2.4