Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1750

Experiment: m.b. Polymyxin B sulfate 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Polymyxin B sulfate 1 mg/ml
2,059,661	-				-0.1
2,059,661	-				+0.5
2,059,664	-				-1.1
2,059,685	-				+0.5
2,059,839	+		Echvi_1749	0.19	+0.2
2,059,840	-		Echvi_1749	0.20	-0.5
2,059,841	+		Echvi_1749	0.20	+0.1
2,059,916	-		Echvi_1749	0.33	-0.8
2,059,977	+		Echvi_1749	0.44	-0.0
2,059,982	+		Echvi_1749	0.45	-2.3
2,059,982	+		Echvi_1749	0.45	-0.9
2,060,048	-		Echvi_1749	0.56	+0.6
2,060,048	-		Echvi_1749	0.56	-0.8
2,060,107	+		Echvi_1749	0.67	-1.6
2,060,108	-		Echvi_1749	0.67	-1.7
2,060,200	+		Echvi_1749	0.83	-0.3
2,060,201	-		Echvi_1749	0.83	-0.5
2,060,216	-		Echvi_1749	0.86	+0.4
2,060,230	+		Echvi_1749	0.88	-0.5
2,060,235	+		Echvi_1749	0.89	+1.0
2,060,236	-		Echvi_1749	0.89	+2.1
2,060,254	-				-0.4
2,060,278	-				+0.1
2,060,281	+				+0.6
2,060,285	-				+0.1
2,060,285	-				+1.9
2,060,295	+				-1.7
2,060,296	-				-0.1
2,060,303	+				+1.7
2,060,315	-				-0.3
2,060,324	-				+0.1
2,060,380	+				+0.4
2,060,380	+				-0.0
2,060,406	+				+0.6
2,060,406	+				+1.6
2,060,406	+				-0.2
2,060,407	-				-0.2
2,060,412	+				+0.3
2,060,412	+				-0.0
2,060,413	-				+0.1
2,060,413	-				+0.2
2,060,413	-				-1.0
2,060,428	+				+0.6
2,060,580	-				+1.1
2,060,580	-				+1.6
2,060,785	-		Echvi_1750	0.15	-1.7
2,060,785	-		Echvi_1750	0.15	-0.6
2,060,996	-		Echvi_1750	0.25	+1.4
2,061,031	+		Echvi_1750	0.27	-0.2
2,061,031	+		Echvi_1750	0.27	+0.5
2,061,031	+		Echvi_1750	0.27	-0.7
2,061,032	-		Echvi_1750	0.27	+0.2
2,061,038	+		Echvi_1750	0.27	-1.1
2,061,112	-		Echvi_1750	0.31	-0.4
2,061,159	+		Echvi_1750	0.33	+0.3
2,061,159	+		Echvi_1750	0.33	+0.5
2,061,159	+		Echvi_1750	0.33	+0.1
2,061,160	-		Echvi_1750	0.33	+0.7
2,061,232	-		Echvi_1750	0.37	+0.2
2,061,232	-		Echvi_1750	0.37	+0.6
2,061,270	+		Echvi_1750	0.39	+0.7
2,061,271	-		Echvi_1750	0.39	+0.7
2,061,286	-		Echvi_1750	0.40	+0.8
2,061,334	-		Echvi_1750	0.42	+1.0
2,061,334	-		Echvi_1750	0.42	-0.3
2,061,334	-		Echvi_1750	0.42	+0.4
2,061,334	-		Echvi_1750	0.42	-0.1
2,061,403	+		Echvi_1750	0.46	-1.0
2,061,474	+		Echvi_1750	0.49	+0.7
2,061,565	+		Echvi_1750	0.54	+1.4
2,061,619	-		Echvi_1750	0.57	+0.5
2,061,619	-		Echvi_1750	0.57	+0.8
2,061,692	-		Echvi_1750	0.60	+1.7
2,061,692	-		Echvi_1750	0.60	+0.5
2,061,779	-		Echvi_1750	0.65	-0.1
2,061,908	+		Echvi_1750	0.71	+0.6
2,062,031	+		Echvi_1750	0.77	+1.1
2,062,031	+		Echvi_1750	0.77	+0.1
2,062,031	+		Echvi_1750	0.77	-1.1
2,062,031	+		Echvi_1750	0.77	-0.5
2,062,031	+		Echvi_1750	0.77	-0.0
2,062,031	+		Echvi_1750	0.77	-0.1
2,062,032	-		Echvi_1750	0.77	-0.6
2,062,032	-		Echvi_1750	0.77	-0.7
2,062,032	-		Echvi_1750	0.77	+0.7
2,062,055	-		Echvi_1750	0.78	+2.4
2,062,075	-		Echvi_1750	0.80	+0.4
2,062,075	-		Echvi_1750	0.80	+0.1
2,062,077	+		Echvi_1750	0.80	+0.2
2,062,078	-		Echvi_1750	0.80	-0.7
2,062,078	-		Echvi_1750	0.80	-0.3
2,062,079	+		Echvi_1750	0.80	-0.1
2,062,140	+		Echvi_1750	0.83	+0.5
2,062,140	+		Echvi_1750	0.83	-0.3
2,062,140	+		Echvi_1750	0.83	-0.7
2,062,274	-		Echvi_1750	0.90	-0.5
2,062,274	-		Echvi_1750	0.90	+1.7
2,062,274	-		Echvi_1750	0.90	+0.7
2,062,418	-				-0.3
2,062,455	-				+4.0
2,062,589	+		Echvi_1751	0.13	-1.3
2,062,589	+		Echvi_1751	0.13	+0.6
2,062,685	+		Echvi_1751	0.25	-0.5
2,062,685	+		Echvi_1751	0.25	-0.6
2,062,685	+		Echvi_1751	0.25	-1.5
2,062,695	+		Echvi_1751	0.26	-0.0
2,062,696	-		Echvi_1751	0.26	-0.2
2,062,704	-		Echvi_1751	0.27	+0.8
2,062,834	+		Echvi_1751	0.43	+0.3
2,062,966	-		Echvi_1751	0.60	-0.2
2,063,086	-		Echvi_1751	0.75	-0.4
2,063,086	-		Echvi_1751	0.75	+1.3
2,063,121	+		Echvi_1751	0.79	-1.2
2,063,121	+		Echvi_1751	0.79	-1.5
2,063,210	+				-3.0
2,063,211	-				-0.9
2,063,211	-				-2.2
2,063,211	-				-0.0
2,063,225	+				-0.7
2,063,225	+				-1.4
2,063,226	-				-0.3
2,063,226	-				-0.4
2,063,230	-				-0.1
2,063,260	+				-3.7
2,063,261	-				-0.3
2,063,261	-				+0.1
2,063,266	+				-2.6
2,063,267	-				+0.3
2,063,267	-				+0.1
2,063,267	-				+0.2
2,063,267	-				-0.4
2,063,267	-				+0.9
2,063,269	-				-2.0
2,063,297	-				-0.2
2,063,304	+				-0.2
2,063,370	+				-0.9
2,063,371	-				-0.0
2,063,371	-				+0.8
2,063,470	+		Echvi_1752	0.29	-1.5