Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1731

Experiment: m.b. Polymyxin B sulfate 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Polymyxin B sulfate 1 mg/ml
2,039,378	+				+0.5
2,039,378	+				-0.2
2,039,379	-				-0.5
2,039,411	+				+0.2
2,039,461	-				+0.0
2,039,461	-				+1.2
2,039,474	+				-0.5
2,039,519	+				+0.7
2,039,522	+				-1.6
2,039,528	+				-0.7
2,039,528	+				-1.0
2,039,529	-				+0.4
2,039,529	-				-1.4
2,039,562	-				-0.7
2,039,562	-				+0.6
2,039,584	+				-0.7
2,039,587	-				-0.1
2,039,587	-				-0.1
2,039,587	-				+0.5
2,039,606	+		Echvi_1730	0.12	+0.7
2,039,606	+		Echvi_1730	0.12	+2.5
2,039,606	+		Echvi_1730	0.12	+0.3
2,039,606	+		Echvi_1730	0.12	+0.5
2,039,607	-		Echvi_1730	0.12	+0.9
2,039,613	-		Echvi_1730	0.13	+1.2
2,039,696	+		Echvi_1730	0.24	+0.7
2,039,696	+		Echvi_1730	0.24	+0.6
2,039,697	-		Echvi_1730	0.24	+0.4
2,039,707	+		Echvi_1730	0.25	+1.1
2,039,707	+		Echvi_1730	0.25	+0.2
2,039,765	+		Echvi_1730	0.33	+0.5
2,039,765	+		Echvi_1730	0.33	+0.9
2,039,766	-		Echvi_1730	0.33	+1.1
2,039,829	+		Echvi_1730	0.41	+0.4
2,039,831	+		Echvi_1730	0.42	-0.2
2,039,831	+		Echvi_1730	0.42	+0.3
2,039,831	+		Echvi_1730	0.42	-0.1
2,039,831	+		Echvi_1730	0.42	+0.1
2,039,835	+		Echvi_1730	0.42	-0.7
2,039,835	+		Echvi_1730	0.42	+0.4
2,039,835	+		Echvi_1730	0.42	-0.2
2,039,835	+		Echvi_1730	0.42	+1.7
2,039,835	+		Echvi_1730	0.42	+0.0
2,039,835	+		Echvi_1730	0.42	-0.0
2,039,835	+		Echvi_1730	0.42	+0.0
2,039,835	+		Echvi_1730	0.42	-0.5
2,039,835	+		Echvi_1730	0.42	+1.5
2,039,836	-		Echvi_1730	0.42	-1.0
2,039,836	-				+2.7
2,039,836	-		Echvi_1730	0.42	+0.1
2,039,836	-		Echvi_1730	0.42	-1.4
2,039,837	+		Echvi_1730	0.42	-0.1
2,039,837	+		Echvi_1730	0.42	+0.3
2,039,837	+		Echvi_1730	0.42	-0.4
2,039,837	+		Echvi_1730	0.42	-0.6
2,039,837	+		Echvi_1730	0.42	-0.8
2,039,837	+		Echvi_1730	0.42	+1.0
2,039,837	+		Echvi_1730	0.42	+0.4
2,039,837	+		Echvi_1730	0.42	-0.7
2,039,837	+		Echvi_1730	0.42	+1.1
2,039,838	-		Echvi_1730	0.43	+0.0
2,039,838	-		Echvi_1730	0.43	-0.2
2,039,838	-		Echvi_1730	0.43	+1.1
2,039,838	-		Echvi_1730	0.43	+0.2
2,039,838	-		Echvi_1730	0.43	+0.5
2,039,838	-		Echvi_1730	0.43	+0.3
2,039,838	-		Echvi_1730	0.43	-0.3
2,039,838	-		Echvi_1730	0.43	+1.1
2,039,843	+		Echvi_1730	0.43	+0.1
2,039,844	-		Echvi_1730	0.43	+0.1
2,039,849	+		Echvi_1730	0.44	-1.7
2,039,849	+		Echvi_1730	0.44	+1.2
2,039,849	+		Echvi_1730	0.44	+0.4
2,039,859	+		Echvi_1730	0.45	-0.9
2,039,859	+		Echvi_1730	0.45	+0.3
2,039,866	+		Echvi_1730	0.46	+0.2
2,039,866	+		Echvi_1730	0.46	+0.8
2,039,867	-		Echvi_1730	0.46	-0.1
2,039,880	-		Echvi_1730	0.48	+0.9
2,039,929	-		Echvi_1730	0.55	+0.2
2,039,954	+		Echvi_1730	0.58	+1.0
2,039,983	-		Echvi_1730	0.62	-0.3
2,040,027	+		Echvi_1730	0.67	-0.4
2,040,077	+		Echvi_1730	0.74	-0.1
2,040,077	+		Echvi_1730	0.74	+1.6
2,040,077	+		Echvi_1730	0.74	+0.7
2,040,077	+		Echvi_1730	0.74	-0.3
2,040,077	+		Echvi_1730	0.74	+1.5
2,040,077	+		Echvi_1730	0.74	-0.4
2,040,078	-		Echvi_1730	0.74	-0.7
2,040,078	-		Echvi_1730	0.74	+0.5
2,040,086	+		Echvi_1730	0.75	+1.7
2,040,086	+		Echvi_1730	0.75	+0.8
2,040,092	+		Echvi_1730	0.76	-0.9
2,040,109	+		Echvi_1730	0.78	-0.6
2,040,110	-		Echvi_1730	0.78	+0.7
2,040,152	+		Echvi_1730	0.84	+0.6
2,040,152	+		Echvi_1730	0.84	-2.0
2,040,153	-		Echvi_1730	0.84	-1.4
2,040,153	-		Echvi_1730	0.84	-0.3
2,040,153	-		Echvi_1730	0.84	+0.6
2,040,153	-		Echvi_1730	0.84	+1.0
2,040,260	-				-0.0
2,040,273	+				+1.2
2,040,285	+				+3.6
2,040,285	+				+0.0
2,040,326	-				+2.5
2,040,488	-		Echvi_1731	0.15	+0.3
2,040,953	-		Echvi_1731	0.77	-0.4
2,040,954	+		Echvi_1731	0.77	+0.7
2,041,124	-				+0.1
2,041,143	-				-0.4
2,041,153	+				+0.9
2,041,154	-				-0.7
2,041,154	-				-2.3
2,041,154	-				-0.4
2,041,250	-				-1.0
2,041,279	-		Echvi_1732	0.13	-1.4
2,041,587	-		Echvi_1732	0.57	+0.7
2,041,609	-		Echvi_1732	0.60	+1.7
2,041,609	-		Echvi_1732	0.60	+1.4
2,041,897	+				+0.2
2,041,909	+				+1.5
2,041,909	+				+0.3
2,041,924	+				+1.1
2,041,925	-				+0.0
2,042,003	+		Echvi_1733	0.22	-0.3
2,042,004	-		Echvi_1733	0.22	+0.3
2,042,065	+		Echvi_1733	0.33	+2.0
2,042,065	+		Echvi_1733	0.33	-1.2
2,042,074	+		Echvi_1733	0.35	+0.6
2,042,075	-		Echvi_1733	0.35	-0.6