Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1722

Experiment: m.b. Polymyxin B sulfate 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Polymyxin B sulfate 1 mg/ml
2,030,109	+		Echvi_1721	0.50	-1.2
2,030,109	+		Echvi_1721	0.50	+0.4
2,030,109	+		Echvi_1721	0.50	-1.6
2,030,110	-		Echvi_1721	0.50	-0.0
2,030,111	+		Echvi_1721	0.50	+0.7
2,030,112	-		Echvi_1721	0.50	-0.6
2,030,112	-		Echvi_1721	0.50	-1.2
2,030,112	-		Echvi_1721	0.50	-0.0
2,030,170	+		Echvi_1721	0.58	-1.2
2,030,171	-		Echvi_1721	0.58	-0.5
2,030,171	-		Echvi_1721	0.58	-1.7
2,030,178	+		Echvi_1721	0.59	-0.8
2,030,179	-		Echvi_1721	0.59	-0.0
2,030,210	-		Echvi_1721	0.64	+1.0
2,030,251	-		Echvi_1721	0.69	-0.5
2,030,365	+		Echvi_1721	0.85	-1.1
2,030,444	-				-2.0
2,030,458	+				-0.4
2,030,473	-				-0.9
2,030,481	+				-1.8
2,030,484	+				+0.1
2,030,485	-				+0.2
2,030,550	+				-0.3
2,030,571	-				-0.3
2,030,804	-				-2.1
2,030,809	-				-2.7
2,030,935	-				-0.7
2,031,019	+				+0.2
2,031,020	-				-2.5
2,031,062	+				-1.8
2,031,062	+				-0.1
2,031,067	+				-0.1
2,031,067	+				+0.7
2,031,068	-				-3.2
2,031,276	-		Echvi_1722	0.33	-3.9
2,031,293	+		Echvi_1722	0.36	-2.7
2,031,297	+		Echvi_1722	0.36	-1.6
2,031,298	-		Echvi_1722	0.36	-2.9
2,031,299	+		Echvi_1722	0.37	-2.2
2,031,327	+		Echvi_1722	0.41	-0.9
2,031,328	-		Echvi_1722	0.41	-2.6
2,031,328	-		Echvi_1722	0.41	-1.6
2,031,329	+		Echvi_1722	0.42	-1.9
2,031,330	-		Echvi_1722	0.42	-4.3
2,031,330	-		Echvi_1722	0.42	-1.1
2,031,357	+		Echvi_1722	0.46	-3.6
2,031,358	-		Echvi_1722	0.46	-1.3
2,031,358	-		Echvi_1722	0.46	-0.2
2,031,358	-		Echvi_1722	0.46	-2.3
2,031,359	+		Echvi_1722	0.47	-2.3
2,031,396	+		Echvi_1722	0.53	-2.2
2,031,603	-		Echvi_1722	0.87	-1.9
2,031,617	-		Echvi_1722	0.90	-2.6
2,031,617	-		Echvi_1722	0.90	-2.7
2,031,617	-		Echvi_1722	0.90	-1.1
2,031,627	+				+1.5
2,031,663	+				-1.8
2,031,663	+				-1.4
2,031,664	-				-0.7
2,031,666	-				-2.3
2,031,666	-				-0.9
2,031,695	+				-0.9
2,031,695	+				-1.8
2,031,696	-				-0.5
2,031,739	-				+0.4
2,031,743	+				+0.9
2,031,768	-				-1.4
2,031,791	-				-0.2