Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1212

Experiment: m.b. Polymyxin B sulfate 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Polymyxin B sulfate 1 mg/ml
1,387,464	+				+0.0
1,387,465	-				+1.9
1,387,465	-				+0.0
1,387,471	+				+0.3
1,387,492	+		Echvi_1211	0.12	-2.0
1,387,519	+		Echvi_1211	0.15	+0.4
1,387,522	+		Echvi_1211	0.15	+0.2
1,387,529	+		Echvi_1211	0.16	-0.6
1,387,529	+		Echvi_1211	0.16	-0.8
1,387,566	+		Echvi_1211	0.20	-0.3
1,387,567	-		Echvi_1211	0.20	+0.4
1,387,610	+		Echvi_1211	0.25	+0.3
1,387,611	-		Echvi_1211	0.25	-2.2
1,387,611	-		Echvi_1211	0.25	-2.8
1,387,614	+		Echvi_1211	0.25	-1.3
1,387,614	+		Echvi_1211	0.25	-0.4
1,387,614	+		Echvi_1211	0.25	-0.8
1,387,614	+		Echvi_1211	0.25	-1.2
1,387,614	+		Echvi_1211	0.25	+0.3
1,387,625	+		Echvi_1211	0.26	-0.1
1,387,646	+		Echvi_1211	0.28	-1.2
1,387,646	+		Echvi_1211	0.28	-2.4
1,387,646	+		Echvi_1211	0.28	-0.6
1,387,646	+		Echvi_1211	0.28	-0.7
1,387,646	+		Echvi_1211	0.28	-0.8
1,387,686	+		Echvi_1211	0.33	-0.3
1,387,686	+		Echvi_1211	0.33	+0.7
1,387,726	+		Echvi_1211	0.37	-0.8
1,387,726	+		Echvi_1211	0.37	-0.1
1,387,726	+		Echvi_1211	0.37	-2.7
1,387,778	+		Echvi_1211	0.43	-0.9
1,387,816	+		Echvi_1211	0.47	+0.6
1,387,903	+		Echvi_1211	0.56	-0.2
1,387,999	+		Echvi_1211	0.66	+0.0
1,387,999	+		Echvi_1211	0.66	+0.5
1,387,999	+		Echvi_1211	0.66	-0.5
1,388,000	-		Echvi_1211	0.66	-0.8
1,388,000	-		Echvi_1211	0.66	-0.7
1,388,000	-		Echvi_1211	0.66	-1.1
1,388,000	-		Echvi_1211	0.66	-0.1
1,388,016	-		Echvi_1211	0.68	-0.6
1,388,024	+		Echvi_1211	0.69	+0.5
1,388,025	-		Echvi_1211	0.69	-0.2
1,388,148	-		Echvi_1211	0.82	-0.5
1,388,148	-		Echvi_1211	0.82	-2.0
1,388,172	-		Echvi_1211	0.85	+0.2
1,388,190	-		Echvi_1211	0.87	-1.4
1,388,213	+		Echvi_1211	0.89	-1.1
1,388,213	+		Echvi_1211	0.89	-0.9
1,388,213	+		Echvi_1211	0.89	-2.5
1,388,213	+		Echvi_1211	0.89	-1.2
1,388,214	-		Echvi_1211	0.89	-0.8
1,388,233	+				-0.1
1,388,233	+				-1.3
1,388,233	-				+0.6
1,388,234	-				+0.8
1,388,234	-				+0.5
1,388,234	-				-1.0
1,388,244	-				-1.2
1,388,250	+				-2.5
1,388,250	+				-1.2
1,388,251	-				-0.1
1,388,269	-				-0.8
1,388,339	-				-0.6
1,388,365	-				-0.2
1,388,401	+				-0.2
1,388,401	+				+1.2
1,388,474	+				+1.1
1,388,474	+				+0.4
1,388,478	+				+0.6
1,388,544	+				-0.1
1,388,586	+		Echvi_1212	0.12	+0.6
1,388,587	-		Echvi_1212	0.12	+0.8
1,388,626	+		Echvi_1212	0.15	+0.2
1,388,626	+		Echvi_1212	0.15	+1.1
1,388,676	-		Echvi_1212	0.20	+1.3
1,388,737	-		Echvi_1212	0.25	-0.1
1,388,801	-		Echvi_1212	0.31	+0.1
1,388,818	+		Echvi_1212	0.32	+0.5
1,388,819	-		Echvi_1212	0.32	+0.9
1,388,819	-		Echvi_1212	0.32	+0.3
1,388,859	+		Echvi_1212	0.36	-0.3
1,388,859	+		Echvi_1212	0.36	-1.6
1,388,860	-		Echvi_1212	0.36	+0.5
1,388,891	-		Echvi_1212	0.39	+0.8
1,388,891	-		Echvi_1212	0.39	+1.5
1,388,991	-		Echvi_1212	0.47	-0.1
1,388,991	-		Echvi_1212	0.47	+0.0
1,389,039	-		Echvi_1212	0.52	+0.6
1,389,095	-		Echvi_1212	0.56	+0.4
1,389,095	-		Echvi_1212	0.56	+1.4
1,389,095	-		Echvi_1212	0.56	+0.2
1,389,095	-		Echvi_1212	0.56	+0.9
1,389,096	+		Echvi_1212	0.57	-0.2
1,389,097	-		Echvi_1212	0.57	+1.3
1,389,148	+		Echvi_1212	0.61	+0.8
1,389,176	+		Echvi_1212	0.64	-0.5
1,389,258	+		Echvi_1212	0.71	-0.1
1,389,263	-		Echvi_1212	0.71	+0.9
1,389,320	+		Echvi_1212	0.76	-1.0
1,389,381	+		Echvi_1212	0.82	-1.0
1,389,381	+		Echvi_1212	0.82	+1.2
1,389,382	-		Echvi_1212	0.82	-0.3
1,389,382	-		Echvi_1212	0.82	+0.4
1,389,382	-		Echvi_1212	0.82	-0.8
1,389,382	-		Echvi_1212	0.82	+0.8
1,389,382	-		Echvi_1212	0.82	+1.0
1,389,385	+		Echvi_1212	0.82	+1.1
1,389,385	+		Echvi_1212	0.82	-0.1
1,389,385	+		Echvi_1212	0.82	-1.4
1,389,385	+		Echvi_1212	0.82	+0.2
1,389,385	+		Echvi_1212	0.82	-0.3
1,389,386	-		Echvi_1212	0.82	-0.1
1,389,395	+		Echvi_1212	0.83	-0.3
1,389,395	+		Echvi_1212	0.83	-1.2
1,389,396	-		Echvi_1212	0.83	-1.0
1,389,396	-		Echvi_1212	0.83	+0.2
1,389,416	-		Echvi_1212	0.85	-2.4
1,389,416	-		Echvi_1212	0.85	-0.4
1,389,464	+		Echvi_1212	0.89	+0.7
1,389,579	+				-1.6
1,389,581	+				+0.4
1,389,603	+				-0.0
1,389,603	+				-0.7
1,389,604	-				+1.2
1,389,613	+				+0.3
1,389,614	-				+0.6
1,389,614	-				+0.6
1,389,618	+				+0.3
1,389,618	+				+1.3
1,389,619	-				+1.2
1,389,619	-				+0.5
1,389,625	-				+0.7
1,389,625	-				-0.2
1,389,626	+				-0.1
1,389,626	+				-0.8
1,389,627	-				+0.5
1,389,631	+				-0.4
1,389,641	+				-1.3
1,389,645	+				-0.1
1,389,645	+				-0.8
1,389,646	-				-1.0
1,389,646	-				-0.9
1,389,764	+				+0.6
1,389,765	-				+2.7
1,389,775	-				-0.5
1,389,883	+				+0.2
1,389,883	+				+0.8
1,389,982	+		Echvi_1213	0.12	+0.3
1,390,044	-		Echvi_1213	0.14	-0.4
1,390,090	+		Echvi_1213	0.16	-0.1
1,390,091	-		Echvi_1213	0.16	-0.4
1,390,091	-		Echvi_1213	0.16	-0.5
1,390,091	-		Echvi_1213	0.16	+0.5
1,390,167	-		Echvi_1213	0.20	-0.3
1,390,174	-		Echvi_1213	0.20	+0.0
1,390,223	+		Echvi_1213	0.22	+0.6
1,390,223	+		Echvi_1213	0.22	+0.7
1,390,223	+		Echvi_1213	0.22	+0.6
1,390,223	+		Echvi_1213	0.22	-0.2
1,390,224	-		Echvi_1213	0.22	-1.9
1,390,224	-		Echvi_1213	0.22	+1.5
1,390,224	-		Echvi_1213	0.22	+0.4
1,390,305	+		Echvi_1213	0.26	+0.1
1,390,305	+		Echvi_1213	0.26	-0.1
1,390,306	-		Echvi_1213	0.26	+0.2
1,390,476	+		Echvi_1213	0.33	+0.2
1,390,488	+		Echvi_1213	0.34	-1.5
1,390,488	+		Echvi_1213	0.34	-0.4
1,390,508	+		Echvi_1213	0.34	-0.0
1,390,508	+		Echvi_1213	0.34	+0.5
1,390,508	+		Echvi_1213	0.34	+0.1
1,390,509	-		Echvi_1213	0.34	+1.2
1,390,509	-		Echvi_1213	0.34	+0.1
1,390,509	-		Echvi_1213	0.34	-1.4
1,390,514	+		Echvi_1213	0.35	-0.5
1,390,523	+		Echvi_1213	0.35	-0.5
1,390,524	-		Echvi_1213	0.35	+0.2