Experiment: m.b. Polymyxin B sulfate 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0979 and Echvi_0980 are separated by 72 nucleotides Echvi_0980 and Echvi_0981 overlap by 4 nucleotides
Echvi_0979: Echvi_0979 - siroheme synthase, N-terminal domain, at 1,136,652 to 1,137,224
_0979
Echvi_0980: Echvi_0980 - uroporphyrin-III C-methyltransferase, at 1,137,297 to 1,138,061
_0980
Echvi_0981: Echvi_0981 - Sulfite reductase, beta subunit (hemoprotein), at 1,138,058 to 1,140,160
_0981
Position (kb)
1137
1138
1139 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1136.328 kb on + strand at 1136.328 kb on + strand at 1136.328 kb on + strand at 1136.328 kb on + strand at 1136.329 kb on - strand at 1136.329 kb on - strand at 1136.329 kb on - strand at 1136.329 kb on - strand at 1136.329 kb on - strand at 1136.329 kb on - strand at 1136.332 kb on + strand at 1136.332 kb on + strand at 1136.332 kb on + strand at 1136.333 kb on - strand at 1136.333 kb on - strand at 1136.337 kb on + strand at 1136.337 kb on + strand at 1136.337 kb on + strand at 1136.337 kb on + strand at 1136.337 kb on + strand at 1136.337 kb on + strand at 1136.337 kb on + strand at 1136.338 kb on - strand at 1136.338 kb on - strand at 1136.338 kb on - strand at 1136.338 kb on - strand at 1136.338 kb on - strand at 1136.339 kb on + strand at 1136.339 kb on + strand at 1136.339 kb on + strand at 1136.340 kb on - strand at 1136.340 kb on - strand at 1136.399 kb on + strand at 1136.400 kb on - strand at 1136.400 kb on - strand at 1136.499 kb on - strand at 1136.530 kb on + strand at 1136.590 kb on + strand at 1136.591 kb on - strand at 1136.599 kb on - strand at 1136.621 kb on - strand at 1136.695 kb on - strand at 1136.695 kb on - strand at 1136.701 kb on + strand at 1136.831 kb on + strand, within Echvi_0979 at 1137.169 kb on - strand at 1137.239 kb on - strand at 1137.239 kb on - strand at 1137.239 kb on - strand at 1137.281 kb on - strand at 1137.281 kb on - strand at 1137.288 kb on + strand at 1137.288 kb on + strand at 1137.289 kb on - strand at 1137.298 kb on + strand at 1137.298 kb on + strand at 1137.299 kb on - strand at 1137.331 kb on - strand at 1137.399 kb on + strand, within Echvi_0980 at 1137.399 kb on + strand, within Echvi_0980 at 1137.399 kb on + strand, within Echvi_0980 at 1137.399 kb on + strand, within Echvi_0980 at 1137.399 kb on + strand, within Echvi_0980 at 1137.400 kb on - strand, within Echvi_0980 at 1137.404 kb on + strand, within Echvi_0980 at 1137.404 kb on + strand, within Echvi_0980 at 1137.411 kb on + strand, within Echvi_0980 at 1137.412 kb on - strand, within Echvi_0980 at 1137.412 kb on - strand, within Echvi_0980 at 1137.412 kb on - strand, within Echvi_0980 at 1137.420 kb on + strand, within Echvi_0980 at 1137.420 kb on + strand, within Echvi_0980 at 1137.421 kb on - strand, within Echvi_0980 at 1137.421 kb on - strand, within Echvi_0980 at 1137.421 kb on - strand, within Echvi_0980 at 1137.421 kb on - strand, within Echvi_0980 at 1137.421 kb on - strand, within Echvi_0980 at 1137.421 kb on - strand, within Echvi_0980 at 1137.421 kb on - strand, within Echvi_0980 at 1137.421 kb on - strand, within Echvi_0980 at 1137.421 kb on - strand, within Echvi_0980 at 1137.421 kb on - strand, within Echvi_0980 at 1137.421 kb on - strand, within Echvi_0980 at 1137.422 kb on + strand, within Echvi_0980 at 1137.422 kb on + strand, within Echvi_0980 at 1137.581 kb on + strand, within Echvi_0980 at 1137.581 kb on + strand, within Echvi_0980 at 1137.581 kb on + strand, within Echvi_0980 at 1137.581 kb on + strand, within Echvi_0980 at 1137.673 kb on + strand, within Echvi_0980 at 1137.711 kb on + strand, within Echvi_0980 at 1137.712 kb on - strand, within Echvi_0980 at 1137.712 kb on - strand, within Echvi_0980 at 1137.824 kb on - strand, within Echvi_0980 at 1137.824 kb on - strand, within Echvi_0980 at 1137.845 kb on + strand, within Echvi_0980 at 1137.892 kb on - strand, within Echvi_0980 at 1137.892 kb on - strand, within Echvi_0980 at 1137.932 kb on + strand, within Echvi_0980 at 1137.950 kb on - strand, within Echvi_0980 at 1137.954 kb on + strand, within Echvi_0980 at 1137.954 kb on + strand, within Echvi_0980 at 1137.954 kb on + strand, within Echvi_0980 at 1137.955 kb on - strand, within Echvi_0980 at 1137.990 kb on + strand at 1137.991 kb on - strand at 1138.029 kb on + strand at 1138.057 kb on - strand at 1138.057 kb on - strand at 1138.067 kb on + strand at 1138.068 kb on - strand at 1138.068 kb on - strand at 1138.125 kb on + strand at 1138.125 kb on + strand at 1138.966 kb on + strand, within Echvi_0981 at 1138.966 kb on + strand, within Echvi_0981
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Polymyxin B sulfate 1 mg/ml remove 1,136,328 + -0.5 1,136,328 + +0.3 1,136,328 + -1.2 1,136,328 + +1.8 1,136,329 - -0.2 1,136,329 - +0.1 1,136,329 - +1.2 1,136,329 - +0.5 1,136,329 - -0.2 1,136,329 - +0.1 1,136,332 + +0.1 1,136,332 + -0.4 1,136,332 + +0.5 1,136,333 - +0.5 1,136,333 - +0.7 1,136,337 + -0.4 1,136,337 + -0.2 1,136,337 + +0.1 1,136,337 + +0.2 1,136,337 + +2.5 1,136,337 + -0.4 1,136,337 + -1.4 1,136,338 - +0.5 1,136,338 - +1.6 1,136,338 - +0.1 1,136,338 - +0.8 1,136,338 - -1.9 1,136,339 + +0.8 1,136,339 + +0.7 1,136,339 + -1.4 1,136,340 - -0.4 1,136,340 - +1.6 1,136,399 + +0.2 1,136,400 - -0.0 1,136,400 - +0.6 1,136,499 - +0.3 1,136,530 + +0.5 1,136,590 + -1.0 1,136,591 - +1.1 1,136,599 - -1.5 1,136,621 - +1.5 1,136,695 - -1.3 1,136,695 - +1.4 1,136,701 + -0.4 1,136,831 + Echvi_0979 0.31 +1.2 1,137,169 - +1.7 1,137,239 - +1.0 1,137,239 - +1.3 1,137,239 - +1.3 1,137,281 - +0.8 1,137,281 - +2.1 1,137,288 + +0.9 1,137,288 + -0.3 1,137,289 - +0.9 1,137,298 + -0.2 1,137,298 + +0.6 1,137,299 - +2.0 1,137,331 - +2.0 1,137,399 + Echvi_0980 0.13 -1.5 1,137,399 + Echvi_0980 0.13 -0.0 1,137,399 + Echvi_0980 0.13 +0.6 1,137,399 + Echvi_0980 0.13 +0.2 1,137,399 + Echvi_0980 0.13 -0.0 1,137,400 - Echvi_0980 0.13 +0.5 1,137,404 + Echvi_0980 0.14 -0.0 1,137,404 + Echvi_0980 0.14 -0.7 1,137,411 + Echvi_0980 0.15 -2.4 1,137,412 - Echvi_0980 0.15 +1.4 1,137,412 - Echvi_0980 0.15 +0.4 1,137,412 - Echvi_0980 0.15 +2.1 1,137,420 + Echvi_0980 0.16 +0.2 1,137,420 + Echvi_0980 0.16 -0.2 1,137,421 - Echvi_0980 0.16 +2.5 1,137,421 - Echvi_0980 0.16 +1.8 1,137,421 - Echvi_0980 0.16 +1.3 1,137,421 - Echvi_0980 0.16 +2.2 1,137,421 - Echvi_0980 0.16 +2.8 1,137,421 - Echvi_0980 0.16 +0.1 1,137,421 - Echvi_0980 0.16 +0.6 1,137,421 - Echvi_0980 0.16 +0.4 1,137,421 - Echvi_0980 0.16 +0.4 1,137,421 - Echvi_0980 0.16 +0.6 1,137,421 - Echvi_0980 0.16 +1.5 1,137,422 + Echvi_0980 0.16 -0.7 1,137,422 + Echvi_0980 0.16 +0.5 1,137,581 + Echvi_0980 0.37 +1.8 1,137,581 + Echvi_0980 0.37 +1.4 1,137,581 + Echvi_0980 0.37 +0.8 1,137,581 + Echvi_0980 0.37 -0.3 1,137,673 + Echvi_0980 0.49 +1.1 1,137,711 + Echvi_0980 0.54 -1.6 1,137,712 - Echvi_0980 0.54 -0.1 1,137,712 - Echvi_0980 0.54 -0.1 1,137,824 - Echvi_0980 0.69 +1.3 1,137,824 - Echvi_0980 0.69 +0.8 1,137,845 + Echvi_0980 0.72 +0.5 1,137,892 - Echvi_0980 0.78 +0.3 1,137,892 - Echvi_0980 0.78 +1.3 1,137,932 + Echvi_0980 0.83 -0.1 1,137,950 - Echvi_0980 0.85 +1.2 1,137,954 + Echvi_0980 0.86 -1.5 1,137,954 + Echvi_0980 0.86 +2.0 1,137,954 + Echvi_0980 0.86 +1.1 1,137,955 - Echvi_0980 0.86 +0.2 1,137,990 + +0.5 1,137,991 - +1.1 1,138,029 + +0.3 1,138,057 - +1.2 1,138,057 - -0.4 1,138,067 + +0.5 1,138,068 - +1.6 1,138,068 - +1.9 1,138,125 + +2.4 1,138,125 + -0.2 1,138,966 + Echvi_0981 0.43 +0.8 1,138,966 + Echvi_0981 0.43 +0.4
Or see this region's nucleotide sequence