Experiment: m.b. Polymyxin B sulfate 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0682 and Echvi_0683 are separated by 344 nucleotides Echvi_0683 and Echvi_0684 are separated by 24 nucleotides Echvi_0684 and Echvi_0685 are separated by 352 nucleotides
Echvi_0682: Echvi_0682 - Outer membrane protein, at 768,754 to 770,082
_0682
Echvi_0683: Echvi_0683 - Putative regulator of cell autolysis, at 770,427 to 772,589
_0683
Echvi_0684: Echvi_0684 - hypothetical protein, at 772,614 to 773,042
_0684
Echvi_0685: Echvi_0685 - Response regulator of the LytR/AlgR family, at 773,395 to 774,165
_0685
Position (kb) 770
771
772
773 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 769.451 kb on + strand, within Echvi_0682 at 769.451 kb on + strand, within Echvi_0682 at 769.451 kb on + strand, within Echvi_0682 at 769.451 kb on + strand, within Echvi_0682 at 769.451 kb on + strand, within Echvi_0682 at 769.452 kb on - strand, within Echvi_0682 at 769.488 kb on - strand, within Echvi_0682 at 769.588 kb on + strand, within Echvi_0682 at 769.589 kb on - strand, within Echvi_0682 at 769.765 kb on + strand, within Echvi_0682 at 769.765 kb on + strand, within Echvi_0682 at 769.765 kb on + strand, within Echvi_0682 at 769.765 kb on + strand, within Echvi_0682 at 769.765 kb on + strand, within Echvi_0682 at 769.765 kb on + strand, within Echvi_0682 at 769.766 kb on - strand, within Echvi_0682 at 769.766 kb on - strand, within Echvi_0682 at 769.807 kb on + strand, within Echvi_0682 at 769.808 kb on - strand, within Echvi_0682 at 769.818 kb on + strand, within Echvi_0682 at 769.825 kb on + strand, within Echvi_0682 at 769.874 kb on + strand, within Echvi_0682 at 769.875 kb on - strand, within Echvi_0682 at 769.930 kb on + strand, within Echvi_0682 at 769.930 kb on + strand, within Echvi_0682 at 769.930 kb on + strand, within Echvi_0682 at 769.931 kb on - strand, within Echvi_0682 at 769.941 kb on + strand, within Echvi_0682 at 769.955 kb on + strand at 769.955 kb on + strand at 770.047 kb on + strand at 770.050 kb on + strand at 770.051 kb on - strand at 770.072 kb on + strand at 770.072 kb on + strand at 770.072 kb on + strand at 770.073 kb on - strand at 770.210 kb on - strand at 770.233 kb on + strand at 770.234 kb on - strand at 770.234 kb on - strand at 770.234 kb on - strand at 770.270 kb on - strand at 770.280 kb on + strand at 770.281 kb on - strand at 770.281 kb on - strand at 770.281 kb on - strand at 770.281 kb on - strand at 770.350 kb on - strand at 770.382 kb on - strand at 770.410 kb on + strand at 770.411 kb on - strand at 770.426 kb on + strand at 770.435 kb on - strand at 770.458 kb on + strand at 770.458 kb on + strand at 770.458 kb on + strand at 770.467 kb on + strand at 770.549 kb on + strand at 770.575 kb on + strand at 770.668 kb on + strand, within Echvi_0683 at 770.686 kb on + strand, within Echvi_0683 at 770.686 kb on + strand, within Echvi_0683 at 770.686 kb on + strand, within Echvi_0683 at 770.686 kb on + strand, within Echvi_0683 at 770.687 kb on - strand, within Echvi_0683 at 770.687 kb on - strand, within Echvi_0683 at 770.687 kb on - strand, within Echvi_0683 at 770.687 kb on - strand, within Echvi_0683 at 770.687 kb on - strand, within Echvi_0683 at 770.691 kb on + strand, within Echvi_0683 at 770.691 kb on + strand, within Echvi_0683 at 770.691 kb on + strand, within Echvi_0683 at 770.691 kb on + strand, within Echvi_0683 at 770.692 kb on - strand, within Echvi_0683 at 770.724 kb on + strand, within Echvi_0683 at 770.724 kb on + strand, within Echvi_0683 at 770.731 kb on - strand, within Echvi_0683 at 770.880 kb on + strand, within Echvi_0683 at 770.880 kb on + strand, within Echvi_0683 at 770.948 kb on + strand, within Echvi_0683 at 770.948 kb on + strand, within Echvi_0683 at 770.949 kb on - strand, within Echvi_0683 at 770.949 kb on - strand, within Echvi_0683 at 771.006 kb on + strand, within Echvi_0683 at 771.041 kb on + strand, within Echvi_0683 at 771.041 kb on + strand, within Echvi_0683 at 771.042 kb on - strand, within Echvi_0683 at 771.042 kb on - strand, within Echvi_0683 at 771.042 kb on - strand, within Echvi_0683 at 771.042 kb on - strand, within Echvi_0683 at 771.047 kb on + strand, within Echvi_0683 at 771.048 kb on - strand, within Echvi_0683 at 771.088 kb on - strand, within Echvi_0683 at 771.088 kb on - strand, within Echvi_0683 at 771.090 kb on + strand, within Echvi_0683 at 771.142 kb on + strand, within Echvi_0683 at 771.189 kb on + strand, within Echvi_0683 at 771.189 kb on + strand, within Echvi_0683 at 771.196 kb on - strand, within Echvi_0683 at 771.373 kb on - strand, within Echvi_0683 at 771.373 kb on - strand, within Echvi_0683 at 771.454 kb on - strand, within Echvi_0683 at 771.454 kb on - strand, within Echvi_0683 at 771.454 kb on - strand, within Echvi_0683 at 771.454 kb on - strand, within Echvi_0683 at 771.454 kb on - strand, within Echvi_0683 at 771.472 kb on - strand, within Echvi_0683 at 771.510 kb on + strand, within Echvi_0683 at 771.510 kb on + strand, within Echvi_0683 at 771.510 kb on + strand, within Echvi_0683 at 771.510 kb on + strand, within Echvi_0683 at 771.510 kb on + strand, within Echvi_0683 at 771.510 kb on + strand, within Echvi_0683 at 771.511 kb on - strand, within Echvi_0683 at 771.688 kb on + strand, within Echvi_0683 at 771.711 kb on - strand, within Echvi_0683 at 771.729 kb on - strand, within Echvi_0683 at 771.912 kb on - strand, within Echvi_0683 at 771.984 kb on - strand, within Echvi_0683 at 772.044 kb on + strand, within Echvi_0683 at 772.045 kb on - strand, within Echvi_0683 at 772.046 kb on + strand, within Echvi_0683 at 772.046 kb on + strand, within Echvi_0683 at 772.046 kb on + strand, within Echvi_0683 at 772.046 kb on + strand, within Echvi_0683 at 772.131 kb on - strand, within Echvi_0683 at 772.140 kb on + strand, within Echvi_0683 at 772.141 kb on - strand, within Echvi_0683 at 772.145 kb on - strand, within Echvi_0683 at 772.182 kb on + strand, within Echvi_0683 at 772.182 kb on + strand, within Echvi_0683 at 772.182 kb on + strand, within Echvi_0683 at 772.193 kb on + strand, within Echvi_0683 at 772.193 kb on + strand, within Echvi_0683 at 772.194 kb on - strand, within Echvi_0683 at 772.207 kb on + strand, within Echvi_0683 at 772.208 kb on - strand, within Echvi_0683 at 772.208 kb on - strand, within Echvi_0683 at 772.255 kb on + strand, within Echvi_0683 at 772.348 kb on + strand, within Echvi_0683 at 772.348 kb on + strand, within Echvi_0683 at 772.349 kb on - strand, within Echvi_0683 at 772.349 kb on - strand, within Echvi_0683 at 772.380 kb on - strand at 772.535 kb on + strand at 772.549 kb on + strand at 772.549 kb on + strand at 772.549 kb on + strand at 772.550 kb on - strand at 772.553 kb on + strand at 772.553 kb on + strand at 772.553 kb on + strand at 772.553 kb on + strand at 772.553 kb on + strand at 772.553 kb on + strand at 772.554 kb on - strand at 772.554 kb on - strand at 772.554 kb on - strand at 772.554 kb on - strand at 772.554 kb on - strand at 772.587 kb on + strand at 772.587 kb on + strand at 772.609 kb on + strand at 772.609 kb on + strand at 772.610 kb on - strand at 772.641 kb on - strand at 772.664 kb on + strand, within Echvi_0684 at 772.664 kb on + strand, within Echvi_0684 at 772.708 kb on + strand, within Echvi_0684 at 772.740 kb on + strand, within Echvi_0684 at 772.740 kb on + strand, within Echvi_0684 at 772.741 kb on - strand, within Echvi_0684 at 772.758 kb on - strand, within Echvi_0684 at 772.784 kb on + strand, within Echvi_0684 at 772.784 kb on + strand at 772.785 kb on - strand, within Echvi_0684 at 772.789 kb on + strand, within Echvi_0684 at 772.804 kb on + strand, within Echvi_0684 at 772.804 kb on + strand, within Echvi_0684 at 772.805 kb on - strand, within Echvi_0684 at 772.922 kb on - strand, within Echvi_0684 at 772.982 kb on - strand, within Echvi_0684 at 773.017 kb on + strand at 773.018 kb on - strand at 773.018 kb on - strand at 773.042 kb on + strand at 773.043 kb on - strand at 773.049 kb on - strand at 773.055 kb on + strand at 773.056 kb on - strand at 773.086 kb on + strand at 773.091 kb on - strand at 773.091 kb on - strand at 773.169 kb on - strand at 773.190 kb on + strand at 773.190 kb on + strand at 773.190 kb on + strand at 773.212 kb on + strand at 773.260 kb on - strand at 773.278 kb on - strand at 773.281 kb on - strand at 773.281 kb on - strand at 773.283 kb on + strand at 773.319 kb on + strand at 773.325 kb on + strand at 773.325 kb on + strand at 773.329 kb on + strand at 773.338 kb on - strand at 773.349 kb on + strand at 773.349 kb on + strand at 773.351 kb on + strand at 773.354 kb on + strand at 773.354 kb on + strand at 773.360 kb on - strand at 773.385 kb on + strand at 773.385 kb on + strand at 773.386 kb on - strand at 773.387 kb on + strand at 773.402 kb on + strand at 773.444 kb on + strand at 773.445 kb on - strand at 773.453 kb on + strand at 773.474 kb on + strand, within Echvi_0685 at 773.526 kb on + strand, within Echvi_0685 at 773.526 kb on + strand, within Echvi_0685 at 773.526 kb on + strand, within Echvi_0685 at 773.527 kb on - strand, within Echvi_0685 at 773.558 kb on + strand, within Echvi_0685 at 773.559 kb on - strand, within Echvi_0685
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Polymyxin B sulfate 1 mg/ml remove 769,451 + Echvi_0682 0.52 -1.0 769,451 + Echvi_0682 0.52 -0.1 769,451 + Echvi_0682 0.52 -0.1 769,451 + Echvi_0682 0.52 +0.5 769,451 + Echvi_0682 0.52 +0.1 769,452 - Echvi_0682 0.53 +0.4 769,488 - Echvi_0682 0.55 +0.1 769,588 + Echvi_0682 0.63 -0.3 769,589 - Echvi_0682 0.63 -0.3 769,765 + Echvi_0682 0.76 -0.2 769,765 + Echvi_0682 0.76 -0.2 769,765 + Echvi_0682 0.76 -0.4 769,765 + Echvi_0682 0.76 -0.1 769,765 + Echvi_0682 0.76 +0.4 769,765 + Echvi_0682 0.76 -0.3 769,766 - Echvi_0682 0.76 -0.6 769,766 - Echvi_0682 0.76 +0.8 769,807 + Echvi_0682 0.79 -0.7 769,808 - Echvi_0682 0.79 +0.6 769,818 + Echvi_0682 0.80 +1.2 769,825 + Echvi_0682 0.81 +0.1 769,874 + Echvi_0682 0.84 +0.5 769,875 - Echvi_0682 0.84 -0.8 769,930 + Echvi_0682 0.88 +1.2 769,930 + Echvi_0682 0.88 +1.8 769,930 + Echvi_0682 0.88 +0.2 769,931 - Echvi_0682 0.89 +0.6 769,941 + Echvi_0682 0.89 +1.3 769,955 + -0.5 769,955 + +0.8 770,047 + -1.6 770,050 + +0.5 770,051 - +1.0 770,072 + -0.3 770,072 + -1.2 770,072 + +3.3 770,073 - +0.7 770,210 - +0.6 770,233 + -0.6 770,234 - +0.6 770,234 - +1.1 770,234 - +0.7 770,270 - -0.3 770,280 + -0.9 770,281 - +1.1 770,281 - -1.6 770,281 - -1.0 770,281 - -0.2 770,350 - -0.5 770,382 - +0.1 770,410 + -0.6 770,411 - -0.4 770,426 + +0.1 770,435 - +0.3 770,458 + -0.5 770,458 + -1.0 770,458 + -0.9 770,467 + -1.0 770,549 + +0.1 770,575 + +0.7 770,668 + Echvi_0683 0.11 +0.7 770,686 + Echvi_0683 0.12 +2.1 770,686 + Echvi_0683 0.12 -0.8 770,686 + Echvi_0683 0.12 -0.5 770,686 + Echvi_0683 0.12 +0.9 770,687 - Echvi_0683 0.12 +0.0 770,687 - Echvi_0683 0.12 +0.4 770,687 - Echvi_0683 0.12 +3.1 770,687 - Echvi_0683 0.12 +0.5 770,687 - Echvi_0683 0.12 +1.2 770,691 + Echvi_0683 0.12 -1.2 770,691 + Echvi_0683 0.12 -0.1 770,691 + Echvi_0683 0.12 -0.2 770,691 + Echvi_0683 0.12 -0.0 770,692 - Echvi_0683 0.12 -0.8 770,724 + Echvi_0683 0.14 -0.5 770,724 + Echvi_0683 0.14 +0.1 770,731 - Echvi_0683 0.14 +1.2 770,880 + Echvi_0683 0.21 +0.3 770,880 + Echvi_0683 0.21 +1.9 770,948 + Echvi_0683 0.24 -0.0 770,948 + Echvi_0683 0.24 +0.1 770,949 - Echvi_0683 0.24 +0.2 770,949 - Echvi_0683 0.24 -0.8 771,006 + Echvi_0683 0.27 -0.3 771,041 + Echvi_0683 0.28 -0.1 771,041 + Echvi_0683 0.28 -0.9 771,042 - Echvi_0683 0.28 -0.5 771,042 - Echvi_0683 0.28 -1.7 771,042 - Echvi_0683 0.28 -0.5 771,042 - Echvi_0683 0.28 +0.5 771,047 + Echvi_0683 0.29 +0.6 771,048 - Echvi_0683 0.29 -0.9 771,088 - Echvi_0683 0.31 -1.4 771,088 - Echvi_0683 0.31 +1.1 771,090 + Echvi_0683 0.31 -1.2 771,142 + Echvi_0683 0.33 +0.1 771,189 + Echvi_0683 0.35 -0.8 771,189 + Echvi_0683 0.35 -0.6 771,196 - Echvi_0683 0.36 +0.4 771,373 - Echvi_0683 0.44 -1.0 771,373 - Echvi_0683 0.44 -0.5 771,454 - Echvi_0683 0.47 -0.1 771,454 - Echvi_0683 0.47 -2.0 771,454 - Echvi_0683 0.47 +0.3 771,454 - Echvi_0683 0.47 -0.6 771,454 - Echvi_0683 0.47 -0.4 771,472 - Echvi_0683 0.48 +0.8 771,510 + Echvi_0683 0.50 +0.5 771,510 + Echvi_0683 0.50 +1.1 771,510 + Echvi_0683 0.50 +0.7 771,510 + Echvi_0683 0.50 +0.1 771,510 + Echvi_0683 0.50 +0.4 771,510 + Echvi_0683 0.50 +0.8 771,511 - Echvi_0683 0.50 +1.7 771,688 + Echvi_0683 0.58 -0.5 771,711 - Echvi_0683 0.59 +1.1 771,729 - Echvi_0683 0.60 -1.1 771,912 - Echvi_0683 0.69 +0.1 771,984 - Echvi_0683 0.72 -0.3 772,044 + Echvi_0683 0.75 +1.0 772,045 - Echvi_0683 0.75 -1.4 772,046 + Echvi_0683 0.75 +0.3 772,046 + Echvi_0683 0.75 -0.9 772,046 + Echvi_0683 0.75 -0.2 772,046 + Echvi_0683 0.75 +0.1 772,131 - Echvi_0683 0.79 -0.6 772,140 + Echvi_0683 0.79 +0.1 772,141 - Echvi_0683 0.79 -0.6 772,145 - Echvi_0683 0.79 +0.7 772,182 + Echvi_0683 0.81 -0.1 772,182 + Echvi_0683 0.81 -0.6 772,182 + Echvi_0683 0.81 +0.1 772,193 + Echvi_0683 0.82 -0.8 772,193 + Echvi_0683 0.82 +0.7 772,194 - Echvi_0683 0.82 +0.0 772,207 + Echvi_0683 0.82 -1.3 772,208 - Echvi_0683 0.82 +0.0 772,208 - Echvi_0683 0.82 +0.7 772,255 + Echvi_0683 0.85 -0.4 772,348 + Echvi_0683 0.89 -0.3 772,348 + Echvi_0683 0.89 +0.1 772,349 - Echvi_0683 0.89 +1.1 772,349 - Echvi_0683 0.89 +0.0 772,380 - -2.4 772,535 + -1.0 772,549 + -1.0 772,549 + -2.6 772,549 + +0.1 772,550 - -0.2 772,553 + -0.3 772,553 + -0.5 772,553 + -0.8 772,553 + +0.3 772,553 + -1.8 772,553 + -1.0 772,554 - +0.6 772,554 - -0.6 772,554 - -0.2 772,554 - -2.0 772,554 - +0.4 772,587 + -0.4 772,587 + -1.1 772,609 + +0.3 772,609 + -0.3 772,610 - -0.3 772,641 - +0.1 772,664 + Echvi_0684 0.12 -1.4 772,664 + Echvi_0684 0.12 -0.1 772,708 + Echvi_0684 0.22 -0.1 772,740 + Echvi_0684 0.29 -2.0 772,740 + Echvi_0684 0.29 -2.4 772,741 - Echvi_0684 0.30 +0.4 772,758 - Echvi_0684 0.34 +0.3 772,784 + Echvi_0684 0.40 -0.0 772,784 + +3.1 772,785 - Echvi_0684 0.40 -1.3 772,789 + Echvi_0684 0.41 +0.4 772,804 + Echvi_0684 0.44 -0.4 772,804 + Echvi_0684 0.44 +0.2 772,805 - Echvi_0684 0.45 -0.9 772,922 - Echvi_0684 0.72 -1.9 772,982 - Echvi_0684 0.86 -0.5 773,017 + -0.5 773,018 - -0.5 773,018 - +1.4 773,042 + +0.7 773,043 - -0.9 773,049 - -1.5 773,055 + +0.7 773,056 - -1.0 773,086 + -0.6 773,091 - +0.3 773,091 - -0.7 773,169 - +0.5 773,190 + -0.5 773,190 + -0.0 773,190 + -0.1 773,212 + +0.2 773,260 - -0.8 773,278 - +0.5 773,281 - +0.2 773,281 - -1.3 773,283 + +0.2 773,319 + -0.6 773,325 + +0.4 773,325 + +0.3 773,329 + +0.3 773,338 - -0.1 773,349 + +0.4 773,349 + +1.2 773,351 + +0.1 773,354 + +0.4 773,354 + +0.5 773,360 - +1.3 773,385 + -0.6 773,385 + +0.4 773,386 - -0.4 773,387 + +0.4 773,402 + -0.1 773,444 + -0.3 773,445 - -0.6 773,453 + +0.1 773,474 + Echvi_0685 0.10 +0.2 773,526 + Echvi_0685 0.17 +1.2 773,526 + Echvi_0685 0.17 -0.4 773,526 + Echvi_0685 0.17 +0.6 773,527 - Echvi_0685 0.17 +2.3 773,558 + Echvi_0685 0.21 -1.2 773,559 - Echvi_0685 0.21 -0.1
Or see this region's nucleotide sequence