Experiment: m.b. Polymyxin B sulfate 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0679 and Echvi_0680 are separated by 355 nucleotides
Echvi_0679: Echvi_0679 - hypothetical protein, at 763,257 to 764,255
_0679
Echvi_0680: Echvi_0680 - RND family efflux transporter, MFP subunit, at 764,611 to 765,693
_0680
Position (kb) 763
764
765 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 762.259 kb on + strand at 762.295 kb on - strand at 762.295 kb on - strand at 762.314 kb on + strand at 762.329 kb on + strand at 762.330 kb on - strand at 762.345 kb on + strand at 762.351 kb on - strand at 762.351 kb on - strand at 762.424 kb on - strand at 762.477 kb on - strand at 762.583 kb on + strand at 762.583 kb on + strand at 762.584 kb on - strand at 762.584 kb on - strand at 762.584 kb on - strand at 762.585 kb on + strand at 762.585 kb on + strand at 762.586 kb on - strand at 762.586 kb on - strand at 762.586 kb on - strand at 762.586 kb on - strand at 762.586 kb on - strand at 762.590 kb on + strand at 762.590 kb on + strand at 762.590 kb on + strand at 762.591 kb on - strand at 762.591 kb on - strand at 762.591 kb on - strand at 762.591 kb on - strand at 762.591 kb on - strand at 762.591 kb on - strand at 762.594 kb on + strand at 762.594 kb on + strand at 762.594 kb on + strand at 762.594 kb on + strand at 762.594 kb on + strand at 762.594 kb on + strand at 762.595 kb on - strand at 762.595 kb on - strand at 762.595 kb on - strand at 762.595 kb on - strand at 762.595 kb on - strand at 762.595 kb on - strand at 762.606 kb on - strand at 762.611 kb on - strand at 762.637 kb on + strand at 762.637 kb on + strand at 762.637 kb on + strand at 762.659 kb on + strand at 762.660 kb on - strand at 762.660 kb on - strand at 762.666 kb on + strand at 762.666 kb on + strand at 762.670 kb on + strand at 762.670 kb on + strand at 762.670 kb on + strand at 762.670 kb on + strand at 762.670 kb on + strand at 762.670 kb on + strand at 762.671 kb on - strand at 762.672 kb on + strand at 762.672 kb on + strand at 762.673 kb on - strand at 762.690 kb on - strand at 762.690 kb on - strand at 762.690 kb on - strand at 762.746 kb on + strand at 762.874 kb on + strand at 762.892 kb on + strand at 762.897 kb on - strand at 762.897 kb on - strand at 762.984 kb on + strand at 762.984 kb on + strand at 762.992 kb on - strand at 763.024 kb on + strand at 763.024 kb on + strand at 763.079 kb on + strand at 763.080 kb on - strand at 763.080 kb on - strand at 763.084 kb on + strand at 763.085 kb on - strand at 763.085 kb on - strand at 763.094 kb on + strand at 763.094 kb on + strand at 763.094 kb on + strand at 763.095 kb on - strand at 763.105 kb on - strand at 763.105 kb on - strand at 763.126 kb on + strand at 763.127 kb on - strand at 763.127 kb on - strand at 763.169 kb on - strand at 763.202 kb on + strand at 763.202 kb on + strand at 763.203 kb on - strand at 763.206 kb on + strand at 763.222 kb on - strand at 763.250 kb on + strand at 763.250 kb on + strand at 763.359 kb on + strand, within Echvi_0679 at 763.360 kb on - strand, within Echvi_0679 at 763.360 kb on - strand, within Echvi_0679 at 763.360 kb on - strand, within Echvi_0679 at 763.433 kb on + strand, within Echvi_0679 at 763.444 kb on + strand, within Echvi_0679 at 763.467 kb on + strand, within Echvi_0679 at 763.468 kb on - strand, within Echvi_0679 at 763.468 kb on - strand, within Echvi_0679 at 763.468 kb on - strand, within Echvi_0679 at 763.474 kb on + strand, within Echvi_0679 at 763.474 kb on + strand, within Echvi_0679 at 763.475 kb on - strand, within Echvi_0679 at 763.523 kb on - strand, within Echvi_0679 at 763.535 kb on + strand, within Echvi_0679 at 763.542 kb on + strand, within Echvi_0679 at 763.543 kb on - strand, within Echvi_0679 at 763.605 kb on + strand, within Echvi_0679 at 763.606 kb on - strand, within Echvi_0679 at 763.606 kb on - strand, within Echvi_0679 at 763.607 kb on + strand, within Echvi_0679 at 763.608 kb on - strand, within Echvi_0679 at 763.659 kb on + strand, within Echvi_0679 at 763.660 kb on - strand, within Echvi_0679 at 763.660 kb on - strand, within Echvi_0679 at 763.662 kb on + strand, within Echvi_0679 at 763.662 kb on + strand, within Echvi_0679 at 763.663 kb on - strand, within Echvi_0679 at 763.663 kb on - strand, within Echvi_0679 at 763.663 kb on - strand, within Echvi_0679 at 763.678 kb on + strand, within Echvi_0679 at 763.679 kb on - strand, within Echvi_0679 at 763.694 kb on - strand, within Echvi_0679 at 763.694 kb on - strand, within Echvi_0679 at 763.718 kb on + strand, within Echvi_0679 at 763.738 kb on - strand, within Echvi_0679 at 763.739 kb on + strand, within Echvi_0679 at 763.861 kb on + strand, within Echvi_0679 at 763.861 kb on + strand, within Echvi_0679 at 763.861 kb on + strand, within Echvi_0679 at 763.861 kb on + strand, within Echvi_0679 at 763.861 kb on + strand, within Echvi_0679 at 763.861 kb on + strand, within Echvi_0679 at 763.861 kb on + strand, within Echvi_0679 at 763.862 kb on - strand, within Echvi_0679 at 763.862 kb on - strand, within Echvi_0679 at 763.862 kb on - strand, within Echvi_0679 at 763.862 kb on - strand, within Echvi_0679 at 763.926 kb on + strand, within Echvi_0679 at 763.926 kb on + strand, within Echvi_0679 at 763.926 kb on + strand, within Echvi_0679 at 763.926 kb on + strand, within Echvi_0679 at 763.927 kb on - strand, within Echvi_0679 at 763.950 kb on + strand, within Echvi_0679 at 763.950 kb on + strand, within Echvi_0679 at 763.950 kb on + strand, within Echvi_0679 at 763.951 kb on - strand, within Echvi_0679 at 763.994 kb on + strand, within Echvi_0679 at 764.046 kb on + strand, within Echvi_0679 at 764.047 kb on - strand, within Echvi_0679 at 764.103 kb on + strand, within Echvi_0679 at 764.103 kb on + strand, within Echvi_0679 at 764.231 kb on + strand at 764.231 kb on + strand at 764.305 kb on + strand at 764.329 kb on - strand at 764.352 kb on - strand at 764.388 kb on - strand at 764.392 kb on + strand at 764.416 kb on + strand at 764.568 kb on - strand at 764.590 kb on + strand at 764.591 kb on - strand at 764.630 kb on + strand at 764.640 kb on - strand at 764.676 kb on - strand at 764.687 kb on + strand at 764.688 kb on - strand at 764.931 kb on + strand, within Echvi_0680 at 764.986 kb on + strand, within Echvi_0680 at 764.987 kb on - strand, within Echvi_0680 at 765.049 kb on + strand, within Echvi_0680 at 765.049 kb on + strand, within Echvi_0680 at 765.050 kb on - strand, within Echvi_0680 at 765.050 kb on - strand, within Echvi_0680 at 765.070 kb on + strand, within Echvi_0680 at 765.071 kb on - strand, within Echvi_0680 at 765.071 kb on - strand, within Echvi_0680 at 765.071 kb on - strand, within Echvi_0680 at 765.075 kb on + strand, within Echvi_0680 at 765.076 kb on - strand, within Echvi_0680 at 765.150 kb on - strand, within Echvi_0680 at 765.150 kb on - strand, within Echvi_0680 at 765.210 kb on + strand, within Echvi_0680 at 765.210 kb on + strand, within Echvi_0680 at 765.211 kb on - strand, within Echvi_0680 at 765.211 kb on - strand, within Echvi_0680
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Polymyxin B sulfate 1 mg/ml remove 762,259 + +0.6 762,295 - +0.2 762,295 - -0.3 762,314 + -0.7 762,329 + -1.0 762,330 - -0.1 762,345 + +0.7 762,351 - -0.1 762,351 - -0.5 762,424 - -1.4 762,477 - -1.0 762,583 + -0.9 762,583 + -2.0 762,584 - -0.6 762,584 - +0.1 762,584 - +0.2 762,585 + -0.1 762,585 + +0.2 762,586 - -0.3 762,586 - -1.5 762,586 - -0.3 762,586 - -0.6 762,586 - +0.9 762,590 + +1.0 762,590 + -3.2 762,590 + -1.0 762,591 - +2.3 762,591 - +0.1 762,591 - -1.3 762,591 - -0.3 762,591 - +0.7 762,591 - -0.8 762,594 + +0.4 762,594 + -0.9 762,594 + -1.9 762,594 + -0.0 762,594 + -1.6 762,594 + +0.7 762,595 - +0.7 762,595 - -0.8 762,595 - -0.1 762,595 - +0.3 762,595 - -0.1 762,595 - -0.4 762,606 - +0.9 762,611 - -0.6 762,637 + -0.4 762,637 + +0.8 762,637 + +0.6 762,659 + +0.8 762,660 - -0.4 762,660 - -0.1 762,666 + -0.9 762,666 + -1.2 762,670 + -0.4 762,670 + +0.4 762,670 + -0.3 762,670 + -0.4 762,670 + -0.3 762,670 + -0.4 762,671 - +0.6 762,672 + -0.3 762,672 + +0.5 762,673 - +0.8 762,690 - -1.1 762,690 - +0.5 762,690 - -0.1 762,746 + -1.9 762,874 + -0.5 762,892 + +0.7 762,897 - -0.8 762,897 - +0.5 762,984 + +1.0 762,984 + -1.5 762,992 - -1.4 763,024 + +0.1 763,024 + +0.7 763,079 + +2.2 763,080 - +0.1 763,080 - -0.4 763,084 + +0.2 763,085 - -0.5 763,085 - -0.2 763,094 + -0.5 763,094 + +0.1 763,094 + +0.5 763,095 - +0.4 763,105 - +0.9 763,105 - -0.3 763,126 + +0.1 763,127 - +0.9 763,127 - +0.9 763,169 - +1.1 763,202 + -2.0 763,202 + +0.1 763,203 - +0.9 763,206 + -0.0 763,222 - -0.1 763,250 + -0.3 763,250 + +1.6 763,359 + Echvi_0679 0.10 +0.4 763,360 - Echvi_0679 0.10 -0.1 763,360 - Echvi_0679 0.10 +0.6 763,360 - Echvi_0679 0.10 +1.7 763,433 + Echvi_0679 0.18 +0.0 763,444 + Echvi_0679 0.19 +1.2 763,467 + Echvi_0679 0.21 +0.5 763,468 - Echvi_0679 0.21 +0.0 763,468 - Echvi_0679 0.21 +1.1 763,468 - Echvi_0679 0.21 +1.3 763,474 + Echvi_0679 0.22 +2.2 763,474 + Echvi_0679 0.22 +0.6 763,475 - Echvi_0679 0.22 +0.9 763,523 - Echvi_0679 0.27 -0.6 763,535 + Echvi_0679 0.28 +0.0 763,542 + Echvi_0679 0.29 -1.4 763,543 - Echvi_0679 0.29 -1.8 763,605 + Echvi_0679 0.35 +0.7 763,606 - Echvi_0679 0.35 -0.1 763,606 - Echvi_0679 0.35 +0.3 763,607 + Echvi_0679 0.35 +0.5 763,608 - Echvi_0679 0.35 +0.8 763,659 + Echvi_0679 0.40 +1.6 763,660 - Echvi_0679 0.40 -0.5 763,660 - Echvi_0679 0.40 +2.1 763,662 + Echvi_0679 0.41 +0.7 763,662 + Echvi_0679 0.41 +0.7 763,663 - Echvi_0679 0.41 +1.1 763,663 - Echvi_0679 0.41 -0.0 763,663 - Echvi_0679 0.41 +0.3 763,678 + Echvi_0679 0.42 +0.7 763,679 - Echvi_0679 0.42 -0.2 763,694 - Echvi_0679 0.44 -1.2 763,694 - Echvi_0679 0.44 -0.2 763,718 + Echvi_0679 0.46 +1.0 763,738 - Echvi_0679 0.48 +0.4 763,739 + Echvi_0679 0.48 -1.3 763,861 + Echvi_0679 0.60 +0.8 763,861 + Echvi_0679 0.60 -0.8 763,861 + Echvi_0679 0.60 +2.1 763,861 + Echvi_0679 0.60 -0.8 763,861 + Echvi_0679 0.60 +0.5 763,861 + Echvi_0679 0.60 -0.1 763,861 + Echvi_0679 0.60 +0.6 763,862 - Echvi_0679 0.61 +0.5 763,862 - Echvi_0679 0.61 -0.1 763,862 - Echvi_0679 0.61 -0.5 763,862 - Echvi_0679 0.61 +0.1 763,926 + Echvi_0679 0.67 +0.8 763,926 + Echvi_0679 0.67 +1.5 763,926 + Echvi_0679 0.67 -0.3 763,926 + Echvi_0679 0.67 -0.5 763,927 - Echvi_0679 0.67 -1.0 763,950 + Echvi_0679 0.69 +0.6 763,950 + Echvi_0679 0.69 -0.2 763,950 + Echvi_0679 0.69 +0.5 763,951 - Echvi_0679 0.69 +3.1 763,994 + Echvi_0679 0.74 +1.5 764,046 + Echvi_0679 0.79 +0.7 764,047 - Echvi_0679 0.79 +0.4 764,103 + Echvi_0679 0.85 +1.4 764,103 + Echvi_0679 0.85 +0.2 764,231 + +0.4 764,231 + -0.8 764,305 + +0.8 764,329 - -0.9 764,352 - -0.3 764,388 - +0.7 764,392 + -0.4 764,416 + +1.1 764,568 - +1.5 764,590 + +0.1 764,591 - +0.9 764,630 + +0.3 764,640 - -0.4 764,676 - -0.0 764,687 + -1.5 764,688 - +2.7 764,931 + Echvi_0680 0.30 +0.6 764,986 + Echvi_0680 0.35 -1.8 764,987 - Echvi_0680 0.35 -0.6 765,049 + Echvi_0680 0.40 -0.8 765,049 + Echvi_0680 0.40 -0.9 765,050 - Echvi_0680 0.41 +0.2 765,050 - Echvi_0680 0.41 -1.7 765,070 + Echvi_0680 0.42 +1.5 765,071 - Echvi_0680 0.42 +0.3 765,071 - Echvi_0680 0.42 -0.1 765,071 - Echvi_0680 0.42 +0.0 765,075 + Echvi_0680 0.43 +1.0 765,076 - Echvi_0680 0.43 -1.3 765,150 - Echvi_0680 0.50 -0.2 765,150 - Echvi_0680 0.50 -1.5 765,210 + Echvi_0680 0.55 +0.3 765,210 + Echvi_0680 0.55 -0.5 765,211 - Echvi_0680 0.55 +1.2 765,211 - Echvi_0680 0.55 -2.2
Or see this region's nucleotide sequence