Experiment: m.b. Polymyxin B sulfate 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0335 and Echvi_0336 are separated by 156 nucleotides Echvi_0336 and Echvi_0337 are separated by 141 nucleotides Echvi_0337 and Echvi_0338 are separated by 243 nucleotides
Echvi_0335: Echvi_0335 - Uncharacterized protein conserved in bacteria, at 357,353 to 358,105
_0335
Echvi_0336: Echvi_0336 - rare lipoprotein A, at 358,262 to 358,624
_0336
Echvi_0337: Echvi_0337 - 3-phosphoglycerate kinase, at 358,766 to 359,965
_0337
Echvi_0338: Echvi_0338 - Sua5/YciO/YrdC/YwlC family protein, at 360,209 to 361,171
_0338
Position (kb) 358
359
360 Strain fitness (log2 ratio) -2
-1
0
1 at 357.941 kb on + strand, within Echvi_0335 at 357.993 kb on - strand, within Echvi_0335 at 357.993 kb on - strand, within Echvi_0335 at 357.994 kb on + strand, within Echvi_0335 at 357.994 kb on + strand, within Echvi_0335 at 357.995 kb on - strand, within Echvi_0335 at 358.036 kb on - strand at 358.036 kb on - strand at 358.036 kb on - strand at 358.169 kb on + strand at 358.193 kb on + strand at 358.204 kb on + strand at 358.222 kb on + strand at 358.222 kb on + strand at 358.222 kb on + strand at 358.260 kb on - strand at 358.262 kb on - strand at 358.275 kb on + strand at 358.276 kb on - strand at 358.276 kb on - strand at 358.368 kb on - strand, within Echvi_0336 at 358.615 kb on - strand at 358.615 kb on - strand at 358.620 kb on - strand at 358.727 kb on + strand at 359.970 kb on - strand at 359.970 kb on - strand at 359.974 kb on - strand at 359.974 kb on - strand at 360.088 kb on + strand at 360.117 kb on + strand at 360.162 kb on + strand at 360.179 kb on - strand at 360.180 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Polymyxin B sulfate 1 mg/ml remove 357,941 + Echvi_0335 0.78 +0.4 357,993 - Echvi_0335 0.85 +0.8 357,993 - Echvi_0335 0.85 +0.3 357,994 + Echvi_0335 0.85 -0.9 357,994 + Echvi_0335 0.85 +0.2 357,995 - Echvi_0335 0.85 -0.5 358,036 - +0.2 358,036 - +0.6 358,036 - -0.4 358,169 + -1.0 358,193 + -0.0 358,204 + -2.6 358,222 + +0.2 358,222 + +1.4 358,222 + -0.4 358,260 - -1.5 358,262 - +0.1 358,275 + +0.9 358,276 - +0.2 358,276 - -0.4 358,368 - Echvi_0336 0.29 -0.3 358,615 - +0.0 358,615 - -0.4 358,620 - -0.4 358,727 + +1.6 359,970 - +0.3 359,970 - +0.4 359,974 - -0.8 359,974 - -0.1 360,088 + -0.2 360,117 + -0.2 360,162 + -0.2 360,179 - +0.9 360,180 + +0.9
Or see this region's nucleotide sequence