Experiment: m.b. Polymyxin B sulfate 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0198 and Echvi_0199 are separated by 74 nucleotides Echvi_0199 and Echvi_0200 are separated by 58 nucleotides Echvi_0200 and Echvi_0201 are separated by 432 nucleotides
Echvi_0198: Echvi_0198 - Coenzyme F390 synthetase, at 213,652 to 214,656
_0198
Echvi_0199: Echvi_0199 - hypothetical protein, at 214,731 to 215,405
_0199
Echvi_0200: Echvi_0200 - Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit, at 215,464 to 217,878
_0200
Echvi_0201: Echvi_0201 - alanine dehydrogenase, at 218,311 to 219,429
_0201
Position (kb) 215
216
217
218 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 214.495 kb on + strand, within Echvi_0198 at 214.547 kb on + strand, within Echvi_0198 at 214.548 kb on - strand, within Echvi_0198 at 214.548 kb on - strand, within Echvi_0198 at 214.554 kb on + strand, within Echvi_0198 at 214.624 kb on + strand at 214.625 kb on - strand at 214.625 kb on - strand at 214.663 kb on - strand at 214.669 kb on + strand at 214.669 kb on + strand at 214.670 kb on - strand at 214.670 kb on - strand at 214.670 kb on - strand at 214.670 kb on - strand at 214.670 kb on - strand at 214.672 kb on - strand at 214.707 kb on - strand at 214.714 kb on + strand at 214.714 kb on + strand at 214.715 kb on - strand at 214.718 kb on + strand at 214.719 kb on - strand at 214.719 kb on - strand at 214.746 kb on + strand at 214.747 kb on - strand at 214.747 kb on - strand at 214.747 kb on - strand at 214.747 kb on - strand at 214.752 kb on + strand at 214.752 kb on + strand at 214.752 kb on + strand at 214.752 kb on + strand at 214.753 kb on - strand at 214.753 kb on - strand at 214.753 kb on - strand at 214.753 kb on - strand at 214.753 kb on - strand at 214.753 kb on - strand at 214.754 kb on + strand at 214.754 kb on + strand at 214.754 kb on + strand at 214.755 kb on - strand at 214.755 kb on - strand at 214.789 kb on + strand at 214.830 kb on + strand, within Echvi_0199 at 214.830 kb on + strand, within Echvi_0199 at 214.831 kb on - strand, within Echvi_0199 at 214.846 kb on - strand, within Echvi_0199 at 214.855 kb on + strand, within Echvi_0199 at 214.855 kb on + strand, within Echvi_0199 at 214.882 kb on + strand, within Echvi_0199 at 214.882 kb on + strand, within Echvi_0199 at 214.882 kb on + strand, within Echvi_0199 at 214.883 kb on - strand, within Echvi_0199 at 214.883 kb on - strand, within Echvi_0199 at 214.883 kb on - strand, within Echvi_0199 at 214.889 kb on - strand, within Echvi_0199 at 214.947 kb on + strand, within Echvi_0199 at 214.948 kb on - strand, within Echvi_0199 at 214.986 kb on + strand, within Echvi_0199 at 214.987 kb on - strand, within Echvi_0199 at 214.987 kb on - strand, within Echvi_0199 at 214.988 kb on + strand, within Echvi_0199 at 214.988 kb on + strand, within Echvi_0199 at 214.988 kb on + strand, within Echvi_0199 at 215.025 kb on + strand, within Echvi_0199 at 215.025 kb on + strand, within Echvi_0199 at 215.025 kb on + strand, within Echvi_0199 at 215.026 kb on - strand, within Echvi_0199 at 215.054 kb on + strand, within Echvi_0199 at 215.054 kb on + strand, within Echvi_0199 at 215.054 kb on + strand, within Echvi_0199 at 215.054 kb on + strand, within Echvi_0199 at 215.055 kb on - strand, within Echvi_0199 at 215.100 kb on - strand, within Echvi_0199 at 215.109 kb on + strand, within Echvi_0199 at 215.112 kb on + strand, within Echvi_0199 at 215.112 kb on + strand, within Echvi_0199 at 215.113 kb on - strand, within Echvi_0199 at 215.113 kb on - strand, within Echvi_0199 at 215.113 kb on - strand, within Echvi_0199 at 215.161 kb on - strand, within Echvi_0199 at 215.184 kb on + strand, within Echvi_0199 at 215.187 kb on + strand, within Echvi_0199 at 215.187 kb on + strand, within Echvi_0199 at 215.187 kb on + strand, within Echvi_0199 at 215.188 kb on - strand, within Echvi_0199 at 215.245 kb on + strand, within Echvi_0199 at 215.245 kb on + strand, within Echvi_0199 at 215.262 kb on + strand, within Echvi_0199 at 215.306 kb on + strand, within Echvi_0199 at 215.306 kb on + strand, within Echvi_0199 at 215.345 kb on + strand at 215.355 kb on - strand at 215.355 kb on - strand at 215.360 kb on + strand at 215.459 kb on + strand at 215.459 kb on + strand at 215.460 kb on - strand at 215.460 kb on - strand at 217.879 kb on - strand at 217.879 kb on - strand at 217.879 kb on - strand at 217.951 kb on + strand at 218.237 kb on + strand at 218.238 kb on - strand at 218.270 kb on + strand at 218.272 kb on + strand at 218.272 kb on + strand at 218.272 kb on + strand at 218.272 kb on + strand at 218.283 kb on + strand at 218.283 kb on + strand at 218.283 kb on + strand at 218.287 kb on + strand at 218.287 kb on + strand at 218.287 kb on + strand at 218.287 kb on + strand at 218.290 kb on + strand at 218.408 kb on + strand at 218.409 kb on - strand at 218.409 kb on - strand at 218.409 kb on - strand at 218.410 kb on + strand at 218.459 kb on - strand, within Echvi_0201 at 218.504 kb on - strand, within Echvi_0201 at 218.555 kb on - strand, within Echvi_0201 at 218.565 kb on - strand, within Echvi_0201 at 218.590 kb on + strand, within Echvi_0201 at 218.659 kb on + strand, within Echvi_0201 at 218.697 kb on - strand, within Echvi_0201 at 218.707 kb on - strand, within Echvi_0201 at 218.707 kb on - strand, within Echvi_0201 at 218.718 kb on - strand, within Echvi_0201 at 218.847 kb on - strand, within Echvi_0201 at 218.847 kb on - strand, within Echvi_0201 at 218.847 kb on - strand, within Echvi_0201
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Polymyxin B sulfate 1 mg/ml remove 214,495 + Echvi_0198 0.84 -1.5 214,547 + Echvi_0198 0.89 -1.0 214,548 - Echvi_0198 0.89 -0.1 214,548 - Echvi_0198 0.89 +0.4 214,554 + Echvi_0198 0.90 -0.9 214,624 + +0.2 214,625 - -0.7 214,625 - +1.0 214,663 - -0.6 214,669 + +0.6 214,669 + +0.5 214,670 - +0.5 214,670 - -0.6 214,670 - -0.5 214,670 - +1.2 214,670 - -0.5 214,672 - -0.5 214,707 - +0.1 214,714 + +0.9 214,714 + -1.4 214,715 - +0.2 214,718 + +1.6 214,719 - +0.9 214,719 - -0.1 214,746 + +1.1 214,747 - +0.3 214,747 - -0.3 214,747 - +0.6 214,747 - -0.3 214,752 + +1.1 214,752 + +0.8 214,752 + +0.7 214,752 + +0.7 214,753 - +0.6 214,753 - -0.5 214,753 - -1.4 214,753 - +0.1 214,753 - +0.5 214,753 - +0.5 214,754 + +2.0 214,754 + +1.4 214,754 + +0.8 214,755 - +0.2 214,755 - +0.4 214,789 + +0.6 214,830 + Echvi_0199 0.15 +2.1 214,830 + Echvi_0199 0.15 +1.5 214,831 - Echvi_0199 0.15 -0.9 214,846 - Echvi_0199 0.17 +1.6 214,855 + Echvi_0199 0.18 +0.8 214,855 + Echvi_0199 0.18 +1.6 214,882 + Echvi_0199 0.22 +0.6 214,882 + Echvi_0199 0.22 +1.5 214,882 + Echvi_0199 0.22 +0.8 214,883 - Echvi_0199 0.23 +1.6 214,883 - Echvi_0199 0.23 +0.3 214,883 - Echvi_0199 0.23 +0.5 214,889 - Echvi_0199 0.23 +0.5 214,947 + Echvi_0199 0.32 +0.9 214,948 - Echvi_0199 0.32 +1.0 214,986 + Echvi_0199 0.38 +1.0 214,987 - Echvi_0199 0.38 +0.6 214,987 - Echvi_0199 0.38 -0.1 214,988 + Echvi_0199 0.38 +0.2 214,988 + Echvi_0199 0.38 +0.6 214,988 + Echvi_0199 0.38 +0.4 215,025 + Echvi_0199 0.44 +0.4 215,025 + Echvi_0199 0.44 +0.8 215,025 + Echvi_0199 0.44 +1.1 215,026 - Echvi_0199 0.44 +1.4 215,054 + Echvi_0199 0.48 +0.7 215,054 + Echvi_0199 0.48 +1.4 215,054 + Echvi_0199 0.48 +1.9 215,054 + Echvi_0199 0.48 +1.0 215,055 - Echvi_0199 0.48 +0.6 215,100 - Echvi_0199 0.55 +0.2 215,109 + Echvi_0199 0.56 +1.3 215,112 + Echvi_0199 0.56 +0.2 215,112 + Echvi_0199 0.56 +1.1 215,113 - Echvi_0199 0.57 +0.6 215,113 - Echvi_0199 0.57 +0.6 215,113 - Echvi_0199 0.57 +0.2 215,161 - Echvi_0199 0.64 +0.2 215,184 + Echvi_0199 0.67 +0.5 215,187 + Echvi_0199 0.68 -1.0 215,187 + Echvi_0199 0.68 +0.9 215,187 + Echvi_0199 0.68 +2.2 215,188 - Echvi_0199 0.68 +0.3 215,245 + Echvi_0199 0.76 +2.8 215,245 + Echvi_0199 0.76 -0.8 215,262 + Echvi_0199 0.79 +1.9 215,306 + Echvi_0199 0.85 +0.8 215,306 + Echvi_0199 0.85 +1.7 215,345 + +1.0 215,355 - +1.0 215,355 - +1.4 215,360 + +0.7 215,459 + +2.3 215,459 + -2.1 215,460 - +0.5 215,460 - -0.6 217,879 - +0.2 217,879 - -0.8 217,879 - -1.7 217,951 + +0.0 218,237 + +0.8 218,238 - +0.6 218,270 + +1.1 218,272 + +0.7 218,272 + +0.3 218,272 + -0.2 218,272 + -1.9 218,283 + +1.2 218,283 + +0.2 218,283 + -0.5 218,287 + -0.1 218,287 + -0.6 218,287 + -0.0 218,287 + -0.4 218,290 + -1.0 218,408 + -0.4 218,409 - -0.0 218,409 - -2.1 218,409 - -0.9 218,410 + +0.9 218,459 - Echvi_0201 0.13 -0.2 218,504 - Echvi_0201 0.17 +1.6 218,555 - Echvi_0201 0.22 +0.5 218,565 - Echvi_0201 0.23 -0.2 218,590 + Echvi_0201 0.25 +0.8 218,659 + Echvi_0201 0.31 -1.6 218,697 - Echvi_0201 0.34 -1.1 218,707 - Echvi_0201 0.35 +1.4 218,707 - Echvi_0201 0.35 +0.3 218,718 - Echvi_0201 0.36 +0.4 218,847 - Echvi_0201 0.48 -1.3 218,847 - Echvi_0201 0.48 -0.8 218,847 - Echvi_0201 0.48 -1.3
Or see this region's nucleotide sequence