Experiment: m.b. Polymyxin B sulfate 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0132 and Echvi_0133 are separated by 156 nucleotides Echvi_0133 and Echvi_0134 overlap by 106 nucleotides Echvi_0134 and Echvi_0135 overlap by 29 nucleotides
Echvi_0132: Echvi_0132 - glutamyl-tRNA reductase, at 130,884 to 132,155
_0132
Echvi_0133: Echvi_0133 - KWG Leptospira., at 132,312 to 133,874
_0133
Echvi_0134: Echvi_0134 - hypothetical protein, at 133,769 to 134,284
_0134
Echvi_0135: Echvi_0135 - Uncharacterized protein conserved in bacteria, at 134,256 to 135,263
_0135
Position (kb) 132
133
134 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 132.167 kb on - strand at 132.167 kb on - strand at 132.167 kb on - strand at 132.167 kb on - strand at 132.167 kb on - strand at 132.225 kb on + strand at 132.242 kb on + strand at 132.280 kb on - strand at 132.323 kb on - strand at 132.354 kb on + strand at 132.354 kb on + strand at 132.355 kb on - strand at 132.355 kb on - strand at 132.355 kb on - strand at 132.358 kb on + strand at 132.359 kb on - strand at 132.359 kb on - strand at 132.359 kb on - strand at 132.359 kb on - strand at 132.362 kb on - strand at 132.368 kb on + strand at 132.377 kb on + strand at 132.391 kb on - strand at 132.399 kb on + strand at 132.399 kb on + strand at 132.399 kb on + strand at 132.399 kb on + strand at 132.548 kb on - strand, within Echvi_0133 at 132.549 kb on + strand, within Echvi_0133 at 132.549 kb on + strand, within Echvi_0133 at 132.550 kb on - strand, within Echvi_0133 at 132.550 kb on - strand, within Echvi_0133 at 132.550 kb on - strand, within Echvi_0133 at 132.550 kb on - strand, within Echvi_0133 at 132.550 kb on - strand, within Echvi_0133 at 132.560 kb on - strand, within Echvi_0133 at 132.560 kb on - strand, within Echvi_0133 at 132.640 kb on - strand, within Echvi_0133 at 132.661 kb on - strand, within Echvi_0133 at 132.696 kb on + strand, within Echvi_0133 at 132.696 kb on + strand, within Echvi_0133 at 132.697 kb on - strand, within Echvi_0133 at 132.830 kb on + strand, within Echvi_0133 at 132.830 kb on + strand, within Echvi_0133 at 132.830 kb on + strand, within Echvi_0133 at 132.830 kb on + strand, within Echvi_0133 at 132.830 kb on + strand, within Echvi_0133 at 132.831 kb on - strand, within Echvi_0133 at 132.831 kb on - strand, within Echvi_0133 at 132.834 kb on + strand, within Echvi_0133 at 132.834 kb on + strand, within Echvi_0133 at 132.834 kb on + strand, within Echvi_0133 at 132.835 kb on - strand, within Echvi_0133 at 132.835 kb on - strand, within Echvi_0133 at 132.835 kb on - strand, within Echvi_0133 at 132.835 kb on - strand, within Echvi_0133 at 132.891 kb on + strand, within Echvi_0133 at 132.899 kb on + strand, within Echvi_0133 at 132.918 kb on + strand, within Echvi_0133 at 132.918 kb on + strand, within Echvi_0133 at 132.918 kb on + strand, within Echvi_0133 at 132.919 kb on - strand, within Echvi_0133 at 132.993 kb on + strand, within Echvi_0133 at 132.994 kb on - strand, within Echvi_0133 at 132.994 kb on - strand, within Echvi_0133 at 133.036 kb on - strand, within Echvi_0133 at 133.036 kb on - strand, within Echvi_0133 at 133.036 kb on - strand, within Echvi_0133 at 133.040 kb on + strand, within Echvi_0133 at 133.040 kb on + strand, within Echvi_0133 at 133.040 kb on + strand, within Echvi_0133 at 133.040 kb on + strand, within Echvi_0133 at 133.041 kb on - strand, within Echvi_0133 at 133.041 kb on - strand, within Echvi_0133 at 133.044 kb on + strand, within Echvi_0133 at 133.083 kb on + strand, within Echvi_0133 at 133.083 kb on + strand, within Echvi_0133 at 133.083 kb on + strand, within Echvi_0133 at 133.129 kb on + strand, within Echvi_0133 at 133.179 kb on + strand, within Echvi_0133 at 133.560 kb on + strand, within Echvi_0133 at 133.564 kb on - strand, within Echvi_0133 at 133.571 kb on + strand, within Echvi_0133 at 133.571 kb on + strand, within Echvi_0133 at 133.571 kb on + strand, within Echvi_0133 at 133.572 kb on - strand, within Echvi_0133 at 133.572 kb on - strand, within Echvi_0133 at 133.596 kb on + strand, within Echvi_0133 at 133.596 kb on + strand, within Echvi_0133 at 133.596 kb on + strand, within Echvi_0133 at 133.597 kb on - strand, within Echvi_0133 at 133.597 kb on - strand, within Echvi_0133 at 133.638 kb on - strand, within Echvi_0133 at 133.690 kb on - strand, within Echvi_0133 at 133.690 kb on - strand at 133.765 kb on - strand at 133.765 kb on - strand at 133.765 kb on - strand at 133.768 kb on - strand at 133.873 kb on - strand at 133.912 kb on + strand, within Echvi_0134 at 133.933 kb on + strand, within Echvi_0134 at 133.933 kb on + strand, within Echvi_0134 at 133.934 kb on - strand, within Echvi_0134 at 133.963 kb on + strand, within Echvi_0134 at 134.003 kb on - strand, within Echvi_0134 at 134.003 kb on - strand, within Echvi_0134 at 134.013 kb on + strand, within Echvi_0134 at 134.034 kb on - strand, within Echvi_0134 at 134.034 kb on - strand, within Echvi_0134 at 134.034 kb on - strand, within Echvi_0134 at 134.220 kb on - strand, within Echvi_0134 at 134.237 kb on + strand at 134.279 kb on + strand at 134.279 kb on + strand at 134.279 kb on + strand at 134.279 kb on + strand at 134.279 kb on + strand at 134.280 kb on - strand at 134.280 kb on - strand at 134.356 kb on + strand at 134.359 kb on + strand, within Echvi_0135 at 134.434 kb on - strand, within Echvi_0135 at 134.514 kb on - strand, within Echvi_0135 at 134.528 kb on + strand, within Echvi_0135 at 134.556 kb on + strand, within Echvi_0135 at 134.635 kb on - strand, within Echvi_0135 at 134.635 kb on - strand, within Echvi_0135 at 134.690 kb on + strand, within Echvi_0135 at 134.859 kb on - strand, within Echvi_0135
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Polymyxin B sulfate 1 mg/ml remove 132,167 - -0.3 132,167 - -1.9 132,167 - -0.7 132,167 - -0.5 132,167 - -0.1 132,225 + +0.0 132,242 + -0.2 132,280 - -0.7 132,323 - -1.0 132,354 + +0.2 132,354 + -2.6 132,355 - -0.0 132,355 - -0.0 132,355 - -2.9 132,358 + -1.1 132,359 - -1.5 132,359 - -1.3 132,359 - -1.7 132,359 - -2.4 132,362 - -0.9 132,368 + -3.6 132,377 + -1.8 132,391 - -0.5 132,399 + -3.8 132,399 + -0.9 132,399 + -1.5 132,399 + -2.9 132,548 - Echvi_0133 0.15 -2.5 132,549 + Echvi_0133 0.15 -1.6 132,549 + Echvi_0133 0.15 -1.8 132,550 - Echvi_0133 0.15 -0.7 132,550 - Echvi_0133 0.15 -2.2 132,550 - Echvi_0133 0.15 -0.2 132,550 - Echvi_0133 0.15 -0.1 132,550 - Echvi_0133 0.15 -2.2 132,560 - Echvi_0133 0.16 -2.1 132,560 - Echvi_0133 0.16 -1.4 132,640 - Echvi_0133 0.21 -1.0 132,661 - Echvi_0133 0.22 -4.5 132,696 + Echvi_0133 0.25 +0.2 132,696 + Echvi_0133 0.25 -2.1 132,697 - Echvi_0133 0.25 -0.5 132,830 + Echvi_0133 0.33 -1.5 132,830 + Echvi_0133 0.33 -2.3 132,830 + Echvi_0133 0.33 -2.1 132,830 + Echvi_0133 0.33 -2.2 132,830 + Echvi_0133 0.33 +0.1 132,831 - Echvi_0133 0.33 -2.1 132,831 - Echvi_0133 0.33 +0.4 132,834 + Echvi_0133 0.33 -3.4 132,834 + Echvi_0133 0.33 +0.4 132,834 + Echvi_0133 0.33 -0.2 132,835 - Echvi_0133 0.33 +1.3 132,835 - Echvi_0133 0.33 +0.5 132,835 - Echvi_0133 0.33 -2.0 132,835 - Echvi_0133 0.33 -1.2 132,891 + Echvi_0133 0.37 -2.3 132,899 + Echvi_0133 0.38 -2.1 132,918 + Echvi_0133 0.39 -1.2 132,918 + Echvi_0133 0.39 +0.2 132,918 + Echvi_0133 0.39 +0.6 132,919 - Echvi_0133 0.39 -2.0 132,993 + Echvi_0133 0.44 -1.2 132,994 - Echvi_0133 0.44 -1.5 132,994 - Echvi_0133 0.44 -1.8 133,036 - Echvi_0133 0.46 +0.1 133,036 - Echvi_0133 0.46 -2.2 133,036 - Echvi_0133 0.46 -1.4 133,040 + Echvi_0133 0.47 -2.0 133,040 + Echvi_0133 0.47 -1.2 133,040 + Echvi_0133 0.47 -1.3 133,040 + Echvi_0133 0.47 -2.0 133,041 - Echvi_0133 0.47 -2.5 133,041 - Echvi_0133 0.47 -1.5 133,044 + Echvi_0133 0.47 -0.3 133,083 + Echvi_0133 0.49 -2.9 133,083 + Echvi_0133 0.49 -1.7 133,083 + Echvi_0133 0.49 -2.7 133,129 + Echvi_0133 0.52 -3.1 133,179 + Echvi_0133 0.55 -2.7 133,560 + Echvi_0133 0.80 -1.5 133,564 - Echvi_0133 0.80 -2.0 133,571 + Echvi_0133 0.81 -1.9 133,571 + Echvi_0133 0.81 -2.8 133,571 + Echvi_0133 0.81 -1.8 133,572 - Echvi_0133 0.81 -2.7 133,572 - Echvi_0133 0.81 -2.0 133,596 + Echvi_0133 0.82 +0.7 133,596 + Echvi_0133 0.82 -1.1 133,596 + Echvi_0133 0.82 +0.7 133,597 - Echvi_0133 0.82 -0.2 133,597 - Echvi_0133 0.82 -1.3 133,638 - Echvi_0133 0.85 -1.3 133,690 - Echvi_0133 0.88 -3.1 133,690 - +0.2 133,765 - -0.3 133,765 - -1.1 133,765 - -3.4 133,768 - -1.0 133,873 - -1.5 133,912 + Echvi_0134 0.28 +0.2 133,933 + Echvi_0134 0.32 +1.0 133,933 + Echvi_0134 0.32 +0.6 133,934 - Echvi_0134 0.32 -0.7 133,963 + Echvi_0134 0.38 -0.6 134,003 - Echvi_0134 0.45 +0.5 134,003 - Echvi_0134 0.45 -0.8 134,013 + Echvi_0134 0.47 -0.9 134,034 - Echvi_0134 0.51 +0.1 134,034 - Echvi_0134 0.51 +0.5 134,034 - Echvi_0134 0.51 +0.7 134,220 - Echvi_0134 0.87 -0.6 134,237 + -1.6 134,279 + -0.6 134,279 + -0.6 134,279 + +0.1 134,279 + +0.9 134,279 + +0.2 134,280 - +1.3 134,280 - -0.2 134,356 + +0.2 134,359 + Echvi_0135 0.10 +2.1 134,434 - Echvi_0135 0.18 +0.1 134,514 - Echvi_0135 0.26 +0.9 134,528 + Echvi_0135 0.27 +0.3 134,556 + Echvi_0135 0.30 +0.8 134,635 - Echvi_0135 0.38 +0.1 134,635 - Echvi_0135 0.38 +0.2 134,690 + Echvi_0135 0.43 +0.3 134,859 - Echvi_0135 0.60 +0.3
Or see this region's nucleotide sequence