Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0012

Experiment: m.b. Polymyxin B sulfate 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Polymyxin B sulfate 1 mg/ml
8,135	-		Echvi_0011	0.19	+1.1
8,135	-		Echvi_0011	0.19	+1.1
8,143	-		Echvi_0011	0.20	+0.7
8,153	-		Echvi_0011	0.21	+1.0
8,153	-		Echvi_0011	0.21	-0.7
8,153	-		Echvi_0011	0.21	+0.6
8,212	+		Echvi_0011	0.26	+0.3
8,213	-		Echvi_0011	0.26	+0.2
8,222	+		Echvi_0011	0.26	+2.1
8,266	-		Echvi_0011	0.30	+1.0
8,370	+		Echvi_0011	0.39	-1.1
8,408	+		Echvi_0011	0.42	+1.0
8,408	+		Echvi_0011	0.42	-0.3
8,408	+		Echvi_0011	0.42	+0.4
8,544	+		Echvi_0011	0.53	+1.0
8,545	-		Echvi_0011	0.53	+0.4
8,545	-		Echvi_0011	0.53	+1.0
8,545	-		Echvi_0011	0.53	+0.1
8,600	+		Echvi_0011	0.57	-0.3
8,768	+		Echvi_0011	0.71	+1.0
8,774	+		Echvi_0011	0.71	-0.2
8,774	+		Echvi_0011	0.71	+1.0
8,774	+		Echvi_0011	0.71	-1.6
8,774	+		Echvi_0011	0.71	-1.9
8,775	-		Echvi_0011	0.72	+1.1
8,793	+				+1.2
8,793	+		Echvi_0011	0.73	+1.2
8,804	+		Echvi_0011	0.74	+0.6
8,905	-		Echvi_0011	0.82	+0.7
8,910	-		Echvi_0011	0.83	+0.2
9,029	-				+0.8
9,030	+				-0.3
9,030	+				+0.1
9,031	-				+0.3
9,031	-				-0.2
9,075	+				+1.2
9,096	-				+1.0
9,096	-				+1.8
9,106	-				+0.9
9,117	+				-0.2
9,117	+				+0.2
9,118	-				+0.8
9,182	+				-1.1
9,182	+				+1.6
9,188	+		Echvi_0012	0.11	+2.0
9,189	-		Echvi_0012	0.11	+1.1
9,189	-		Echvi_0012	0.11	+0.5
9,189	-		Echvi_0012	0.11	+1.0
9,327	+		Echvi_0012	0.33	-0.1
9,327	+		Echvi_0012	0.33	+0.2
9,443	-		Echvi_0012	0.51	+1.8
9,450	+		Echvi_0012	0.52	+0.6
9,450	+		Echvi_0012	0.52	+0.7
9,451	-		Echvi_0012	0.52	+0.5
9,473	+		Echvi_0012	0.56	+0.7
9,473	+		Echvi_0012	0.56	+0.3
9,473	+		Echvi_0012	0.56	+0.9
9,473	+		Echvi_0012	0.56	-1.5
9,484	-		Echvi_0012	0.57	-0.8
9,559	+		Echvi_0012	0.69	+0.7
9,563	+		Echvi_0012	0.70	+1.3
9,564	-		Echvi_0012	0.70	+0.6
9,564	-		Echvi_0012	0.70	+0.8
9,660	+		Echvi_0012	0.85	-0.7
9,661	-		Echvi_0012	0.85	+2.2
9,727	+				+1.4
9,738	-				-0.3
9,738	-				-0.2
9,755	+				+0.3