Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0011

Experiment: m.b. Polymyxin B sulfate 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Polymyxin B sulfate 1 mg/ml
6,906	+		Echvi_0009	0.49	+1.7
6,930	-		Echvi_0009	0.52	+1.1
6,942	+		Echvi_0009	0.53	+0.3
6,943	-		Echvi_0009	0.53	+1.7
6,958	-		Echvi_0009	0.55	+0.4
6,961	+		Echvi_0009	0.56	+0.0
6,961	+		Echvi_0009	0.56	-2.1
6,962	-		Echvi_0009	0.56	-0.1
6,962	-		Echvi_0009	0.56	-0.4
6,962	-		Echvi_0009	0.56	+1.6
7,003	-		Echvi_0009	0.61	+0.1
7,155	-		Echvi_0009	0.79	-0.3
7,191	-		Echvi_0009	0.84	-1.5
7,211	+		Echvi_0009	0.86	-0.0
7,212	-		Echvi_0009	0.86	+0.1
7,226	+		Echvi_0009	0.88	-1.1
7,261	+				+0.7
7,262	-				+0.3
7,262	-				+1.8
7,282	+				-0.3
7,352	-				-0.1
7,354	+				-0.9
7,354	+				+2.2
7,355	-				-1.2
7,355	-				+0.2
7,355	-				+0.5
7,355	-				+0.6
7,356	+				+0.6
7,356	+				-0.1
7,357	-				-0.0
7,357	-				+0.7
7,357	-				+1.9
7,357	-				-0.1
7,357	-				-0.1
7,357	-				+0.2
7,357	-				+0.2
7,407	+				-0.4
7,408	-				-1.7
7,429	+				+1.0
7,430	-				+2.5
7,430	-				+0.3
7,433	+				+0.5
7,433	+				+1.1
7,434	-				+0.7
7,474	+				+1.1
7,474	+				+1.3
7,474	+				+1.3
7,475	-				+1.5
7,475	-				+0.7
7,479	+				+0.5
7,544	-		Echvi_0010	0.23	-0.5
7,632	+		Echvi_0010	0.43	+0.4
7,632	+		Echvi_0010	0.43	+1.5
7,633	-		Echvi_0010	0.44	+0.4
7,640	+		Echvi_0010	0.45	+0.8
7,652	+		Echvi_0010	0.48	+0.5
7,676	+		Echvi_0010	0.54	+0.2
7,676	+		Echvi_0010	0.54	+0.6
7,676	+		Echvi_0010	0.54	+1.1
7,676	+		Echvi_0010	0.54	+0.9
7,676	+		Echvi_0010	0.54	+1.0
7,677	-		Echvi_0010	0.54	+0.4
7,677	-		Echvi_0010	0.54	+0.7
7,677	-		Echvi_0010	0.54	-0.3
7,679	-		Echvi_0010	0.54	+1.3
7,679	-		Echvi_0010	0.54	-0.8
7,679	-		Echvi_0010	0.54	+0.0
7,737	+		Echvi_0010	0.68	+0.9
7,738	-		Echvi_0010	0.68	+0.6
7,741	+		Echvi_0010	0.69	-1.4
7,742	-		Echvi_0010	0.69	-1.5
7,742	-		Echvi_0010	0.69	+0.2
7,775	-		Echvi_0010	0.76	+0.4
7,805	+		Echvi_0010	0.83	+0.5
7,820	+		Echvi_0010	0.87	-0.6
7,823	+		Echvi_0010	0.87	-0.2
7,824	-		Echvi_0010	0.88	-0.7
7,851	+				-0.1
7,851	+				-1.1
7,851	+				+1.2
7,852	-				+0.5
7,857	+				+1.1
7,858	-				+0.2
7,858	-				+1.2
7,858	-				+0.6
7,862	+				+0.7
7,883	+				+0.9
7,884	-				+0.5
7,884	-				-1.2
7,886	+				-0.2
7,887	-				+1.5
7,898	+				+0.5
7,898	+				-0.2
7,898	+				+1.1
7,921	-				+0.5
7,929	+				+1.0
7,976	-				+0.1
7,983	-				+0.8
8,095	-		Echvi_0011	0.16	-0.2
8,111	-		Echvi_0011	0.17	+1.1
8,135	-		Echvi_0011	0.19	+1.1
8,135	-		Echvi_0011	0.19	+1.1
8,143	-		Echvi_0011	0.20	+0.7
8,153	-		Echvi_0011	0.21	+1.0
8,153	-		Echvi_0011	0.21	-0.7
8,153	-		Echvi_0011	0.21	+0.6
8,212	+		Echvi_0011	0.26	+0.3
8,213	-		Echvi_0011	0.26	+0.2
8,222	+		Echvi_0011	0.26	+2.1
8,266	-		Echvi_0011	0.30	+1.0
8,370	+		Echvi_0011	0.39	-1.1
8,408	+		Echvi_0011	0.42	+1.0
8,408	+		Echvi_0011	0.42	-0.3
8,408	+		Echvi_0011	0.42	+0.4
8,544	+		Echvi_0011	0.53	+1.0
8,545	-		Echvi_0011	0.53	+0.4
8,545	-		Echvi_0011	0.53	+1.0
8,545	-		Echvi_0011	0.53	+0.1
8,600	+		Echvi_0011	0.57	-0.3
8,768	+		Echvi_0011	0.71	+1.0
8,774	+		Echvi_0011	0.71	-0.2
8,774	+		Echvi_0011	0.71	+1.0
8,774	+		Echvi_0011	0.71	-1.6
8,774	+		Echvi_0011	0.71	-1.9
8,775	-		Echvi_0011	0.72	+1.1
8,793	+				+1.2
8,793	+		Echvi_0011	0.73	+1.2
8,804	+		Echvi_0011	0.74	+0.6
8,905	-		Echvi_0011	0.82	+0.7
8,910	-		Echvi_0011	0.83	+0.2
9,029	-				+0.8
9,030	+				-0.3
9,030	+				+0.1
9,031	-				+0.3
9,031	-				-0.2
9,075	+				+1.2
9,096	-				+1.0
9,096	-				+1.8
9,106	-				+0.9
9,117	+				-0.2
9,117	+				+0.2
9,118	-				+0.8
9,182	+				-1.1
9,182	+				+1.6
9,188	+		Echvi_0012	0.11	+2.0
9,189	-		Echvi_0012	0.11	+1.1
9,189	-		Echvi_0012	0.11	+0.5
9,189	-		Echvi_0012	0.11	+1.0
9,327	+		Echvi_0012	0.33	-0.1
9,327	+		Echvi_0012	0.33	+0.2
9,443	-		Echvi_0012	0.51	+1.8
9,450	+		Echvi_0012	0.52	+0.6
9,450	+		Echvi_0012	0.52	+0.7
9,451	-		Echvi_0012	0.52	+0.5
9,473	+		Echvi_0012	0.56	+0.7
9,473	+		Echvi_0012	0.56	+0.3
9,473	+		Echvi_0012	0.56	+0.9
9,473	+		Echvi_0012	0.56	-1.5
9,484	-		Echvi_0012	0.57	-0.8
9,559	+		Echvi_0012	0.69	+0.7
9,563	+		Echvi_0012	0.70	+1.3
9,564	-		Echvi_0012	0.70	+0.6
9,564	-		Echvi_0012	0.70	+0.8
9,660	+		Echvi_0012	0.85	-0.7
9,661	-		Echvi_0012	0.85	+2.2
9,727	+				+1.4
9,738	-				-0.3
9,738	-				-0.2
9,755	+				+0.3