Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4015 and EX28DRAFT_4016 are separated by 616 nucleotides EX28DRAFT_4016 and EX28DRAFT_4017 are separated by 107 nucleotides
EX28DRAFT_4015: EX28DRAFT_4015 - F0F1-type ATP synthase, subunit I, at 224,687 to 225,067
_4015
EX28DRAFT_4016: EX28DRAFT_4016 - 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG, at 225,684 to 226,307
_4016
EX28DRAFT_4017: EX28DRAFT_4017 - glucose-inhibited division protein A, at 226,415 to 228,304
_4017
Position (kb) 225
226
227 Strain fitness (log2 ratio) -1
0
1
2 at 224.825 kb on - strand, within EX28DRAFT_4015 at 224.876 kb on - strand, within EX28DRAFT_4015 at 225.047 kb on - strand at 225.097 kb on - strand at 225.097 kb on - strand at 225.113 kb on - strand at 225.161 kb on - strand at 225.195 kb on - strand at 225.217 kb on + strand at 225.351 kb on + strand at 225.351 kb on + strand at 225.352 kb on - strand at 225.352 kb on - strand at 225.352 kb on - strand at 225.453 kb on - strand at 225.468 kb on - strand at 225.701 kb on + strand at 225.702 kb on - strand at 225.705 kb on + strand at 225.744 kb on + strand at 225.744 kb on + strand at 225.854 kb on + strand, within EX28DRAFT_4016 at 225.855 kb on - strand, within EX28DRAFT_4016 at 225.985 kb on - strand, within EX28DRAFT_4016 at 226.148 kb on + strand, within EX28DRAFT_4016 at 226.148 kb on + strand, within EX28DRAFT_4016 at 226.156 kb on - strand, within EX28DRAFT_4016 at 226.180 kb on - strand, within EX28DRAFT_4016 at 226.180 kb on - strand, within EX28DRAFT_4016 at 226.180 kb on - strand, within EX28DRAFT_4016 at 226.220 kb on + strand, within EX28DRAFT_4016 at 226.229 kb on - strand, within EX28DRAFT_4016 at 226.268 kb on + strand at 226.314 kb on + strand at 226.317 kb on - strand at 226.353 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 224,825 - EX28DRAFT_4015 0.36 +2.5 224,876 - EX28DRAFT_4015 0.50 +1.4 225,047 - +1.7 225,097 - +0.1 225,097 - +1.1 225,113 - +1.0 225,161 - +0.5 225,195 - -0.8 225,217 + -0.2 225,351 + -0.5 225,351 + -1.5 225,352 - -1.1 225,352 - -1.6 225,352 - -0.9 225,453 - -1.3 225,468 - -1.2 225,701 + +0.7 225,702 - -1.1 225,705 + +0.7 225,744 + +1.2 225,744 + +0.8 225,854 + EX28DRAFT_4016 0.27 +2.0 225,855 - EX28DRAFT_4016 0.27 +0.7 225,985 - EX28DRAFT_4016 0.48 -0.6 226,148 + EX28DRAFT_4016 0.74 +1.6 226,148 + EX28DRAFT_4016 0.74 +0.6 226,156 - EX28DRAFT_4016 0.76 -0.4 226,180 - EX28DRAFT_4016 0.79 -0.4 226,180 - EX28DRAFT_4016 0.79 +0.4 226,180 - EX28DRAFT_4016 0.79 -0.2 226,220 + EX28DRAFT_4016 0.86 +0.5 226,229 - EX28DRAFT_4016 0.87 +1.1 226,268 + +0.4 226,314 + +0.4 226,317 - -0.6 226,353 + +0.7
Or see this region's nucleotide sequence