Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3594 and EX28DRAFT_3595 are separated by 39 nucleotides EX28DRAFT_3595 and EX28DRAFT_3596 are separated by 117 nucleotides
EX28DRAFT_3594: EX28DRAFT_3594 - lipoyltransferase and lipoate-protein ligase, at 251,663 to 252,679
_3594
EX28DRAFT_3595: EX28DRAFT_3595 - Uncharacterized membrane protein affecting hemolysin expression, at 252,719 to 253,363
_3595
EX28DRAFT_3596: EX28DRAFT_3596 - phosphoserine phosphatase SerB, at 253,481 to 254,449
_3596
Position (kb) 252
253
254 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 251.762 kb on - strand at 251.899 kb on + strand, within EX28DRAFT_3594 at 251.900 kb on - strand, within EX28DRAFT_3594 at 252.146 kb on - strand, within EX28DRAFT_3594 at 252.146 kb on - strand, within EX28DRAFT_3594 at 252.186 kb on + strand, within EX28DRAFT_3594 at 252.317 kb on - strand, within EX28DRAFT_3594 at 252.419 kb on - strand, within EX28DRAFT_3594 at 252.500 kb on - strand, within EX28DRAFT_3594 at 252.645 kb on + strand at 252.659 kb on - strand at 252.659 kb on - strand at 252.668 kb on + strand at 252.709 kb on + strand at 252.715 kb on - strand at 252.855 kb on - strand, within EX28DRAFT_3595 at 252.883 kb on + strand, within EX28DRAFT_3595 at 252.884 kb on - strand, within EX28DRAFT_3595 at 253.086 kb on + strand, within EX28DRAFT_3595 at 253.298 kb on + strand, within EX28DRAFT_3595 at 253.299 kb on - strand at 253.390 kb on + strand at 253.391 kb on - strand at 253.391 kb on - strand at 253.391 kb on - strand at 253.405 kb on + strand at 253.406 kb on - strand at 253.432 kb on + strand at 253.468 kb on + strand at 253.479 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 251,762 - +0.4 251,899 + EX28DRAFT_3594 0.23 -0.1 251,900 - EX28DRAFT_3594 0.23 -0.3 252,146 - EX28DRAFT_3594 0.47 -0.5 252,146 - EX28DRAFT_3594 0.47 +0.7 252,186 + EX28DRAFT_3594 0.51 +0.6 252,317 - EX28DRAFT_3594 0.64 -0.4 252,419 - EX28DRAFT_3594 0.74 -0.4 252,500 - EX28DRAFT_3594 0.82 +0.7 252,645 + +0.4 252,659 - +0.0 252,659 - -0.4 252,668 + -0.4 252,709 + +0.8 252,715 - +0.2 252,855 - EX28DRAFT_3595 0.21 -0.8 252,883 + EX28DRAFT_3595 0.25 -0.2 252,884 - EX28DRAFT_3595 0.26 -0.2 253,086 + EX28DRAFT_3595 0.57 +0.1 253,298 + EX28DRAFT_3595 0.90 -0.2 253,299 - +0.4 253,390 + -0.1 253,391 - +0.1 253,391 - -0.3 253,391 - -0.4 253,405 + -0.1 253,406 - -0.9 253,432 + -0.1 253,468 + +0.3 253,479 + -3.1
Or see this region's nucleotide sequence