Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3522 and EX28DRAFT_3523 overlap by 4 nucleotides EX28DRAFT_3523 and EX28DRAFT_3524 are separated by 242 nucleotides EX28DRAFT_3524 and EX28DRAFT_3525 overlap by 1 nucleotides
EX28DRAFT_3522: EX28DRAFT_3522 - Protein of unknown function (DUF2955), at 185,928 to 187,019
_3522
EX28DRAFT_3523: EX28DRAFT_3523 - Predicted membrane protein, at 187,016 to 188,287
_3523
EX28DRAFT_3524: EX28DRAFT_3524 - Protein of unknown function (DUF2778), at 188,530 to 188,892
_3524
EX28DRAFT_3525: EX28DRAFT_3525 - hypothetical protein, at 188,892 to 189,404
_3525
Position (kb) 187
188
189 Strain fitness (log2 ratio) -1
0
1 at 186.137 kb on + strand, within EX28DRAFT_3522 at 186.161 kb on + strand, within EX28DRAFT_3522 at 186.211 kb on - strand, within EX28DRAFT_3522 at 186.261 kb on - strand, within EX28DRAFT_3522 at 186.278 kb on + strand, within EX28DRAFT_3522 at 186.348 kb on - strand, within EX28DRAFT_3522 at 186.438 kb on + strand, within EX28DRAFT_3522 at 186.438 kb on + strand, within EX28DRAFT_3522 at 186.438 kb on + strand, within EX28DRAFT_3522 at 186.628 kb on - strand, within EX28DRAFT_3522 at 186.688 kb on - strand, within EX28DRAFT_3522 at 186.715 kb on - strand, within EX28DRAFT_3522 at 186.731 kb on + strand, within EX28DRAFT_3522 at 186.732 kb on - strand, within EX28DRAFT_3522 at 186.732 kb on - strand, within EX28DRAFT_3522 at 186.846 kb on - strand, within EX28DRAFT_3522 at 186.897 kb on + strand, within EX28DRAFT_3522 at 187.018 kb on - strand at 187.127 kb on - strand at 187.673 kb on - strand, within EX28DRAFT_3523 at 187.723 kb on + strand, within EX28DRAFT_3523 at 187.724 kb on - strand, within EX28DRAFT_3523 at 188.059 kb on + strand, within EX28DRAFT_3523 at 188.671 kb on - strand, within EX28DRAFT_3524 at 188.731 kb on - strand, within EX28DRAFT_3524 at 188.731 kb on - strand, within EX28DRAFT_3524 at 188.980 kb on + strand, within EX28DRAFT_3525 at 189.056 kb on + strand, within EX28DRAFT_3525 at 189.197 kb on - strand, within EX28DRAFT_3525 at 189.206 kb on - strand, within EX28DRAFT_3525 at 189.206 kb on - strand, within EX28DRAFT_3525 at 189.231 kb on - strand, within EX28DRAFT_3525
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 186,137 + EX28DRAFT_3522 0.19 -0.1 186,161 + EX28DRAFT_3522 0.21 +0.1 186,211 - EX28DRAFT_3522 0.26 -0.3 186,261 - EX28DRAFT_3522 0.30 +0.0 186,278 + EX28DRAFT_3522 0.32 +0.8 186,348 - EX28DRAFT_3522 0.38 +0.3 186,438 + EX28DRAFT_3522 0.47 -0.1 186,438 + EX28DRAFT_3522 0.47 +1.1 186,438 + EX28DRAFT_3522 0.47 +0.5 186,628 - EX28DRAFT_3522 0.64 +0.7 186,688 - EX28DRAFT_3522 0.70 -0.1 186,715 - EX28DRAFT_3522 0.72 -0.2 186,731 + EX28DRAFT_3522 0.74 +0.1 186,732 - EX28DRAFT_3522 0.74 +0.3 186,732 - EX28DRAFT_3522 0.74 +0.9 186,846 - EX28DRAFT_3522 0.84 +0.4 186,897 + EX28DRAFT_3522 0.89 -0.0 187,018 - +0.6 187,127 - -0.3 187,673 - EX28DRAFT_3523 0.52 -0.7 187,723 + EX28DRAFT_3523 0.56 +0.1 187,724 - EX28DRAFT_3523 0.56 -0.7 188,059 + EX28DRAFT_3523 0.82 +0.1 188,671 - EX28DRAFT_3524 0.39 -0.9 188,731 - EX28DRAFT_3524 0.55 -0.2 188,731 - EX28DRAFT_3524 0.55 -0.3 188,980 + EX28DRAFT_3525 0.17 +0.2 189,056 + EX28DRAFT_3525 0.32 -0.1 189,197 - EX28DRAFT_3525 0.59 -0.4 189,206 - EX28DRAFT_3525 0.61 +0.1 189,206 - EX28DRAFT_3525 0.61 -0.8 189,231 - EX28DRAFT_3525 0.66 -0.4
Or see this region's nucleotide sequence