Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3133 and EX28DRAFT_3134 overlap by 4 nucleotides EX28DRAFT_3134 and EX28DRAFT_3135 are separated by 510 nucleotides EX28DRAFT_3135 and EX28DRAFT_3136 are separated by 0 nucleotides EX28DRAFT_3136 and EX28DRAFT_3137 are separated by 147 nucleotides
EX28DRAFT_3133: EX28DRAFT_3133 - SmpA / OmlA family, at 433,457 to 433,804
_3133
EX28DRAFT_3134: EX28DRAFT_3134 - hypothetical protein, at 433,801 to 434,226
_3134
EX28DRAFT_3135: EX28DRAFT_3135 - hypothetical protein, at 434,737 to 435,906
_3135
EX28DRAFT_3136: EX28DRAFT_3136 - Siderophore-interacting protein, at 435,907 to 436,671
_3136
EX28DRAFT_3137: EX28DRAFT_3137 - Predicted transcriptional regulators, at 436,819 to 437,313
_3137
Position (kb) 434
435
436 Strain fitness (log2 ratio) -1
0
1
2 at 433.738 kb on - strand, within EX28DRAFT_3133 at 433.830 kb on + strand at 433.953 kb on + strand, within EX28DRAFT_3134 at 434.093 kb on + strand, within EX28DRAFT_3134 at 434.151 kb on - strand, within EX28DRAFT_3134 at 434.159 kb on + strand, within EX28DRAFT_3134 at 434.285 kb on - strand at 434.318 kb on + strand at 434.322 kb on + strand at 434.508 kb on + strand at 434.508 kb on + strand at 434.509 kb on - strand at 434.510 kb on + strand at 434.696 kb on - strand at 434.714 kb on + strand at 434.715 kb on - strand at 434.715 kb on - strand at 434.888 kb on - strand, within EX28DRAFT_3135 at 434.888 kb on - strand, within EX28DRAFT_3135 at 435.068 kb on - strand, within EX28DRAFT_3135 at 435.114 kb on + strand, within EX28DRAFT_3135 at 435.196 kb on + strand, within EX28DRAFT_3135 at 435.700 kb on - strand, within EX28DRAFT_3135 at 435.735 kb on - strand, within EX28DRAFT_3135 at 435.807 kb on + strand at 435.817 kb on + strand at 436.022 kb on + strand, within EX28DRAFT_3136 at 436.022 kb on + strand, within EX28DRAFT_3136 at 436.023 kb on - strand, within EX28DRAFT_3136 at 436.023 kb on - strand, within EX28DRAFT_3136 at 436.023 kb on - strand, within EX28DRAFT_3136 at 436.124 kb on + strand, within EX28DRAFT_3136 at 436.125 kb on - strand, within EX28DRAFT_3136 at 436.131 kb on + strand, within EX28DRAFT_3136 at 436.132 kb on - strand, within EX28DRAFT_3136 at 436.133 kb on + strand, within EX28DRAFT_3136 at 436.133 kb on + strand, within EX28DRAFT_3136 at 436.134 kb on - strand, within EX28DRAFT_3136 at 436.245 kb on - strand, within EX28DRAFT_3136 at 436.400 kb on + strand, within EX28DRAFT_3136 at 436.412 kb on + strand, within EX28DRAFT_3136 at 436.412 kb on + strand, within EX28DRAFT_3136 at 436.412 kb on + strand, within EX28DRAFT_3136 at 436.432 kb on + strand, within EX28DRAFT_3136 at 436.432 kb on + strand, within EX28DRAFT_3136 at 436.515 kb on + strand, within EX28DRAFT_3136 at 436.638 kb on + strand at 436.662 kb on + strand at 436.663 kb on - strand at 436.663 kb on - strand at 436.695 kb on - strand at 436.702 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 433,738 - EX28DRAFT_3133 0.81 +0.2 433,830 + -1.2 433,953 + EX28DRAFT_3134 0.36 -0.9 434,093 + EX28DRAFT_3134 0.69 -0.6 434,151 - EX28DRAFT_3134 0.82 -0.5 434,159 + EX28DRAFT_3134 0.84 -0.2 434,285 - -0.2 434,318 + +0.1 434,322 + +0.1 434,508 + +0.3 434,508 + -0.2 434,509 - +0.2 434,510 + -0.2 434,696 - +0.5 434,714 + -0.7 434,715 - -0.1 434,715 - -0.2 434,888 - EX28DRAFT_3135 0.13 -0.3 434,888 - EX28DRAFT_3135 0.13 +0.0 435,068 - EX28DRAFT_3135 0.28 -0.5 435,114 + EX28DRAFT_3135 0.32 -0.2 435,196 + EX28DRAFT_3135 0.39 +0.5 435,700 - EX28DRAFT_3135 0.82 +0.3 435,735 - EX28DRAFT_3135 0.85 -0.5 435,807 + +2.3 435,817 + +0.2 436,022 + EX28DRAFT_3136 0.15 -0.0 436,022 + EX28DRAFT_3136 0.15 -1.6 436,023 - EX28DRAFT_3136 0.15 +0.0 436,023 - EX28DRAFT_3136 0.15 +0.2 436,023 - EX28DRAFT_3136 0.15 -0.3 436,124 + EX28DRAFT_3136 0.28 +0.1 436,125 - EX28DRAFT_3136 0.28 -0.3 436,131 + EX28DRAFT_3136 0.29 -0.4 436,132 - EX28DRAFT_3136 0.29 +0.5 436,133 + EX28DRAFT_3136 0.30 -0.3 436,133 + EX28DRAFT_3136 0.30 +0.2 436,134 - EX28DRAFT_3136 0.30 -0.8 436,245 - EX28DRAFT_3136 0.44 +0.7 436,400 + EX28DRAFT_3136 0.64 +0.2 436,412 + EX28DRAFT_3136 0.66 +0.3 436,412 + EX28DRAFT_3136 0.66 +0.2 436,412 + EX28DRAFT_3136 0.66 -1.1 436,432 + EX28DRAFT_3136 0.69 +0.2 436,432 + EX28DRAFT_3136 0.69 +0.2 436,515 + EX28DRAFT_3136 0.79 +0.3 436,638 + +0.6 436,662 + -0.1 436,663 - +0.5 436,663 - -0.5 436,695 - +0.4 436,702 - +0.1
Or see this region's nucleotide sequence