Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3059 and EX28DRAFT_3060 are separated by 31 nucleotides EX28DRAFT_3060 and EX28DRAFT_3061 are separated by 141 nucleotides EX28DRAFT_3061 and EX28DRAFT_3062 are separated by 17 nucleotides EX28DRAFT_3062 and EX28DRAFT_3063 overlap by 4 nucleotides
EX28DRAFT_3059: EX28DRAFT_3059 - Putative NADPH-quinone reductase (modulator of drug activity B), at 369,639 to 370,220
_3059
EX28DRAFT_3060: EX28DRAFT_3060 - Uncharacterized conserved protein, at 370,252 to 370,566
_3060
EX28DRAFT_3061: EX28DRAFT_3061 - BON domain/LysM domain, at 370,708 to 371,148
_3061
EX28DRAFT_3062: EX28DRAFT_3062 - transcriptional regulator, RpiR family, at 371,166 to 372,053
_3062
EX28DRAFT_3063: EX28DRAFT_3063 - ABC-type Fe3+-hydroxamate transport system, periplasmic component, at 372,050 to 373,000
_3063
Position (kb) 370
371
372 Strain fitness (log2 ratio) -2
-1
0
1 at 369.780 kb on + strand, within EX28DRAFT_3059 at 369.824 kb on - strand, within EX28DRAFT_3059 at 369.824 kb on - strand, within EX28DRAFT_3059 at 369.871 kb on + strand, within EX28DRAFT_3059 at 369.879 kb on + strand, within EX28DRAFT_3059 at 369.880 kb on - strand, within EX28DRAFT_3059 at 369.918 kb on + strand, within EX28DRAFT_3059 at 369.993 kb on + strand, within EX28DRAFT_3059 at 369.995 kb on + strand, within EX28DRAFT_3059 at 369.995 kb on + strand, within EX28DRAFT_3059 at 370.176 kb on + strand at 370.177 kb on - strand at 370.177 kb on - strand at 370.188 kb on + strand at 370.219 kb on - strand at 370.219 kb on - strand at 370.245 kb on - strand at 370.564 kb on + strand at 370.656 kb on + strand at 370.671 kb on - strand at 370.671 kb on - strand at 370.676 kb on + strand at 370.677 kb on - strand at 370.677 kb on - strand at 370.749 kb on - strand at 370.749 kb on - strand at 370.756 kb on - strand, within EX28DRAFT_3061 at 370.770 kb on + strand, within EX28DRAFT_3061 at 370.815 kb on + strand, within EX28DRAFT_3061 at 370.815 kb on + strand, within EX28DRAFT_3061 at 370.831 kb on - strand, within EX28DRAFT_3061 at 370.831 kb on - strand, within EX28DRAFT_3061 at 370.842 kb on + strand, within EX28DRAFT_3061 at 370.990 kb on + strand, within EX28DRAFT_3061 at 370.990 kb on + strand, within EX28DRAFT_3061 at 370.990 kb on + strand, within EX28DRAFT_3061 at 370.993 kb on + strand, within EX28DRAFT_3061 at 370.993 kb on + strand, within EX28DRAFT_3061 at 371.025 kb on + strand, within EX28DRAFT_3061 at 371.042 kb on - strand, within EX28DRAFT_3061 at 371.059 kb on + strand, within EX28DRAFT_3061 at 371.060 kb on - strand, within EX28DRAFT_3061 at 371.065 kb on - strand, within EX28DRAFT_3061 at 371.134 kb on - strand at 371.203 kb on - strand at 371.231 kb on + strand at 371.268 kb on - strand, within EX28DRAFT_3062 at 371.268 kb on - strand, within EX28DRAFT_3062 at 371.759 kb on + strand, within EX28DRAFT_3062 at 371.955 kb on - strand, within EX28DRAFT_3062 at 371.955 kb on - strand, within EX28DRAFT_3062 at 371.956 kb on + strand, within EX28DRAFT_3062 at 371.957 kb on - strand, within EX28DRAFT_3062 at 371.957 kb on - strand, within EX28DRAFT_3062 at 372.095 kb on + strand at 372.096 kb on - strand at 372.096 kb on - strand at 372.127 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 369,780 + EX28DRAFT_3059 0.24 -0.0 369,824 - EX28DRAFT_3059 0.32 -1.1 369,824 - EX28DRAFT_3059 0.32 +0.8 369,871 + EX28DRAFT_3059 0.40 -0.6 369,879 + EX28DRAFT_3059 0.41 -0.1 369,880 - EX28DRAFT_3059 0.41 -2.3 369,918 + EX28DRAFT_3059 0.48 -0.2 369,993 + EX28DRAFT_3059 0.61 +0.1 369,995 + EX28DRAFT_3059 0.61 +0.0 369,995 + EX28DRAFT_3059 0.61 -1.2 370,176 + +1.1 370,177 - +0.9 370,177 - -1.2 370,188 + -0.4 370,219 - +0.6 370,219 - -0.2 370,245 - +0.0 370,564 + +0.0 370,656 + -0.3 370,671 - +0.3 370,671 - +0.4 370,676 + +0.3 370,677 - -0.4 370,677 - -0.3 370,749 - -0.2 370,749 - -0.8 370,756 - EX28DRAFT_3061 0.11 -0.9 370,770 + EX28DRAFT_3061 0.14 -0.6 370,815 + EX28DRAFT_3061 0.24 +0.7 370,815 + EX28DRAFT_3061 0.24 +0.3 370,831 - EX28DRAFT_3061 0.28 +0.3 370,831 - EX28DRAFT_3061 0.28 -2.4 370,842 + EX28DRAFT_3061 0.30 +0.5 370,990 + EX28DRAFT_3061 0.64 +0.5 370,990 + EX28DRAFT_3061 0.64 -0.2 370,990 + EX28DRAFT_3061 0.64 -0.4 370,993 + EX28DRAFT_3061 0.65 -0.6 370,993 + EX28DRAFT_3061 0.65 -0.8 371,025 + EX28DRAFT_3061 0.72 +0.2 371,042 - EX28DRAFT_3061 0.76 +0.0 371,059 + EX28DRAFT_3061 0.80 -2.0 371,060 - EX28DRAFT_3061 0.80 -1.1 371,065 - EX28DRAFT_3061 0.81 +0.3 371,134 - -0.2 371,203 - +0.5 371,231 + +1.0 371,268 - EX28DRAFT_3062 0.11 -0.2 371,268 - EX28DRAFT_3062 0.11 +0.5 371,759 + EX28DRAFT_3062 0.67 -0.1 371,955 - EX28DRAFT_3062 0.89 -0.3 371,955 - EX28DRAFT_3062 0.89 +0.0 371,956 + EX28DRAFT_3062 0.89 +0.2 371,957 - EX28DRAFT_3062 0.89 +0.4 371,957 - EX28DRAFT_3062 0.89 -0.3 372,095 + -0.2 372,096 - -0.7 372,096 - +0.6 372,127 - -0.2
Or see this region's nucleotide sequence