Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2758 and EX28DRAFT_2759 are separated by 243 nucleotides EX28DRAFT_2759 and EX28DRAFT_2760 overlap by 4 nucleotides EX28DRAFT_2760 and EX28DRAFT_2761 overlap by 28 nucleotides EX28DRAFT_2761 and EX28DRAFT_2762 are separated by 9 nucleotides
EX28DRAFT_2758: EX28DRAFT_2758 - Uncharacterized conserved protein, at 65,593 to 65,919
_2758
EX28DRAFT_2759: EX28DRAFT_2759 - ribonucleoside-diphosphate reductase class Ib glutaredoxin subunit (EC 1.17.4.1), at 66,163 to 66,402
_2759
EX28DRAFT_2760: EX28DRAFT_2760 - ribonucleoside-diphosphate reductase 2, operon protein nrdI, at 66,399 to 66,809
_2760
EX28DRAFT_2761: EX28DRAFT_2761 - ribonucleoside-diphosphate reductase, alpha subunit, at 66,782 to 68,926
_2761
EX28DRAFT_2762: EX28DRAFT_2762 - ribonucleoside-diphosphate reductase, class 1b, beta subunit, at 68,936 to 69,895
_2762
Position (kb) 66
67
68
69 Strain fitness (log2 ratio) -1
0
1 at 65.853 kb on - strand, within EX28DRAFT_2758 at 65.856 kb on + strand, within EX28DRAFT_2758 at 65.856 kb on + strand, within EX28DRAFT_2758 at 65.856 kb on + strand, within EX28DRAFT_2758 at 65.857 kb on - strand, within EX28DRAFT_2758 at 65.857 kb on - strand, within EX28DRAFT_2758 at 65.918 kb on - strand at 66.033 kb on - strand at 66.078 kb on - strand at 66.078 kb on - strand at 66.104 kb on - strand at 66.104 kb on - strand at 66.399 kb on - strand at 66.414 kb on + strand at 66.414 kb on + strand at 66.512 kb on - strand, within EX28DRAFT_2760 at 66.522 kb on + strand, within EX28DRAFT_2760 at 66.543 kb on + strand, within EX28DRAFT_2760 at 66.764 kb on + strand, within EX28DRAFT_2760 at 66.858 kb on - strand at 66.992 kb on + strand at 66.993 kb on - strand at 67.106 kb on + strand, within EX28DRAFT_2761 at 67.107 kb on - strand, within EX28DRAFT_2761 at 67.115 kb on + strand, within EX28DRAFT_2761 at 67.116 kb on - strand, within EX28DRAFT_2761 at 67.118 kb on - strand, within EX28DRAFT_2761 at 67.146 kb on - strand, within EX28DRAFT_2761 at 67.150 kb on - strand, within EX28DRAFT_2761 at 67.327 kb on + strand, within EX28DRAFT_2761 at 67.339 kb on + strand, within EX28DRAFT_2761 at 67.340 kb on - strand, within EX28DRAFT_2761 at 67.340 kb on - strand, within EX28DRAFT_2761 at 67.512 kb on - strand, within EX28DRAFT_2761 at 67.673 kb on - strand, within EX28DRAFT_2761 at 67.673 kb on - strand, within EX28DRAFT_2761 at 67.688 kb on - strand, within EX28DRAFT_2761 at 67.729 kb on + strand, within EX28DRAFT_2761 at 67.874 kb on + strand, within EX28DRAFT_2761 at 67.997 kb on + strand, within EX28DRAFT_2761 at 68.017 kb on + strand, within EX28DRAFT_2761 at 68.149 kb on + strand, within EX28DRAFT_2761 at 68.271 kb on - strand, within EX28DRAFT_2761 at 68.516 kb on + strand, within EX28DRAFT_2761 at 68.517 kb on - strand, within EX28DRAFT_2761 at 68.517 kb on - strand, within EX28DRAFT_2761 at 68.561 kb on + strand, within EX28DRAFT_2761 at 68.646 kb on - strand, within EX28DRAFT_2761 at 68.696 kb on + strand, within EX28DRAFT_2761 at 68.697 kb on - strand, within EX28DRAFT_2761 at 68.697 kb on - strand, within EX28DRAFT_2761 at 68.697 kb on - strand, within EX28DRAFT_2761 at 68.826 kb on - strand at 68.855 kb on + strand at 68.856 kb on - strand at 68.856 kb on - strand at 69.248 kb on + strand, within EX28DRAFT_2762 at 69.357 kb on - strand, within EX28DRAFT_2762 at 69.446 kb on + strand, within EX28DRAFT_2762 at 69.447 kb on - strand, within EX28DRAFT_2762 at 69.527 kb on + strand, within EX28DRAFT_2762 at 69.528 kb on - strand, within EX28DRAFT_2762 at 69.538 kb on + strand, within EX28DRAFT_2762 at 69.539 kb on - strand, within EX28DRAFT_2762 at 69.589 kb on + strand, within EX28DRAFT_2762 at 69.641 kb on + strand, within EX28DRAFT_2762 at 69.657 kb on - strand, within EX28DRAFT_2762 at 69.735 kb on - strand, within EX28DRAFT_2762 at 69.779 kb on - strand, within EX28DRAFT_2762 at 69.923 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 65,853 - EX28DRAFT_2758 0.80 -0.5 65,856 + EX28DRAFT_2758 0.80 +0.1 65,856 + EX28DRAFT_2758 0.80 +1.3 65,856 + EX28DRAFT_2758 0.80 +0.3 65,857 - EX28DRAFT_2758 0.81 -0.8 65,857 - EX28DRAFT_2758 0.81 +0.7 65,918 - +0.4 66,033 - -0.5 66,078 - +1.0 66,078 - +0.5 66,104 - +0.2 66,104 - +0.1 66,399 - +0.3 66,414 + -1.0 66,414 + +0.9 66,512 - EX28DRAFT_2760 0.27 +0.8 66,522 + EX28DRAFT_2760 0.30 +0.8 66,543 + EX28DRAFT_2760 0.35 -0.1 66,764 + EX28DRAFT_2760 0.89 -0.1 66,858 - -1.0 66,992 + -0.7 66,993 - +0.1 67,106 + EX28DRAFT_2761 0.15 -0.1 67,107 - EX28DRAFT_2761 0.15 +1.1 67,115 + EX28DRAFT_2761 0.16 +0.4 67,116 - EX28DRAFT_2761 0.16 +0.0 67,118 - EX28DRAFT_2761 0.16 -1.3 67,146 - EX28DRAFT_2761 0.17 +0.1 67,150 - EX28DRAFT_2761 0.17 +0.1 67,327 + EX28DRAFT_2761 0.25 +0.7 67,339 + EX28DRAFT_2761 0.26 -0.1 67,340 - EX28DRAFT_2761 0.26 -0.6 67,340 - EX28DRAFT_2761 0.26 +0.3 67,512 - EX28DRAFT_2761 0.34 +0.2 67,673 - EX28DRAFT_2761 0.42 +0.0 67,673 - EX28DRAFT_2761 0.42 +0.4 67,688 - EX28DRAFT_2761 0.42 -0.4 67,729 + EX28DRAFT_2761 0.44 +0.0 67,874 + EX28DRAFT_2761 0.51 +0.6 67,997 + EX28DRAFT_2761 0.57 +0.2 68,017 + EX28DRAFT_2761 0.58 -0.2 68,149 + EX28DRAFT_2761 0.64 +0.4 68,271 - EX28DRAFT_2761 0.69 +0.2 68,516 + EX28DRAFT_2761 0.81 -0.3 68,517 - EX28DRAFT_2761 0.81 -0.1 68,517 - EX28DRAFT_2761 0.81 +0.3 68,561 + EX28DRAFT_2761 0.83 -0.3 68,646 - EX28DRAFT_2761 0.87 -0.5 68,696 + EX28DRAFT_2761 0.89 +1.6 68,697 - EX28DRAFT_2761 0.89 +0.5 68,697 - EX28DRAFT_2761 0.89 +0.1 68,697 - EX28DRAFT_2761 0.89 +0.4 68,826 - +0.1 68,855 + +0.3 68,856 - +0.4 68,856 - +0.2 69,248 + EX28DRAFT_2762 0.33 -0.1 69,357 - EX28DRAFT_2762 0.44 +0.7 69,446 + EX28DRAFT_2762 0.53 +0.3 69,447 - EX28DRAFT_2762 0.53 -1.4 69,527 + EX28DRAFT_2762 0.62 +0.8 69,528 - EX28DRAFT_2762 0.62 -0.0 69,538 + EX28DRAFT_2762 0.63 -0.0 69,539 - EX28DRAFT_2762 0.63 +0.1 69,589 + EX28DRAFT_2762 0.68 -0.3 69,641 + EX28DRAFT_2762 0.73 -0.1 69,657 - EX28DRAFT_2762 0.75 +0.3 69,735 - EX28DRAFT_2762 0.83 -0.2 69,779 - EX28DRAFT_2762 0.88 +0.5 69,923 + -0.3
Or see this region's nucleotide sequence