Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2666 and EX28DRAFT_2667 are separated by 48 nucleotides EX28DRAFT_2667 and EX28DRAFT_2668 are separated by 239 nucleotides EX28DRAFT_2668 and EX28DRAFT_2669 are separated by 108 nucleotides EX28DRAFT_2669 and EX28DRAFT_2670 are separated by 51 nucleotides
EX28DRAFT_2666: EX28DRAFT_2666 - Predicted glutamine amidotransferase, at 2,703,209 to 2,703,976
_2666
EX28DRAFT_2667: EX28DRAFT_2667 - phosphoheptose isomerase, at 2,704,025 to 2,704,603
_2667
EX28DRAFT_2668: EX28DRAFT_2668 - Acyl-CoA dehydrogenases, at 2,704,843 to 2,707,287
_2668
EX28DRAFT_2669: EX28DRAFT_2669 - Predicted amidohydrolase, at 2,707,396 to 2,708,166
_2669
EX28DRAFT_2670: EX28DRAFT_2670 - Gamma-glutamyltransferase, at 2,708,218 to 2,709,819
_2670
Position (kb)
2704
2705
2706
2707
2708 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2703.926 kb on - strand at 2703.976 kb on + strand at 2703.976 kb on + strand at 2703.976 kb on + strand at 2703.977 kb on - strand at 2703.977 kb on - strand at 2704.024 kb on - strand at 2704.024 kb on - strand at 2704.026 kb on + strand at 2704.026 kb on + strand at 2704.027 kb on - strand at 2704.027 kb on - strand at 2704.030 kb on + strand at 2704.030 kb on + strand at 2704.031 kb on - strand at 2704.609 kb on + strand at 2704.632 kb on - strand at 2704.673 kb on + strand at 2704.746 kb on - strand at 2704.787 kb on + strand at 2704.795 kb on + strand at 2704.796 kb on - strand at 2704.895 kb on - strand at 2704.895 kb on - strand at 2705.034 kb on + strand at 2705.034 kb on + strand at 2705.181 kb on + strand, within EX28DRAFT_2668 at 2705.181 kb on + strand, within EX28DRAFT_2668 at 2705.181 kb on + strand, within EX28DRAFT_2668 at 2705.181 kb on + strand, within EX28DRAFT_2668 at 2705.181 kb on + strand, within EX28DRAFT_2668 at 2705.182 kb on - strand, within EX28DRAFT_2668 at 2705.224 kb on - strand, within EX28DRAFT_2668 at 2705.383 kb on + strand, within EX28DRAFT_2668 at 2705.384 kb on - strand, within EX28DRAFT_2668 at 2705.454 kb on + strand, within EX28DRAFT_2668 at 2705.488 kb on + strand, within EX28DRAFT_2668 at 2705.678 kb on - strand, within EX28DRAFT_2668 at 2705.679 kb on + strand, within EX28DRAFT_2668 at 2705.679 kb on + strand, within EX28DRAFT_2668 at 2705.680 kb on - strand, within EX28DRAFT_2668 at 2705.680 kb on - strand, within EX28DRAFT_2668 at 2705.772 kb on + strand, within EX28DRAFT_2668 at 2705.773 kb on - strand, within EX28DRAFT_2668 at 2705.894 kb on - strand, within EX28DRAFT_2668 at 2705.934 kb on + strand, within EX28DRAFT_2668 at 2706.149 kb on - strand, within EX28DRAFT_2668 at 2706.149 kb on - strand, within EX28DRAFT_2668 at 2706.156 kb on + strand, within EX28DRAFT_2668 at 2706.199 kb on + strand, within EX28DRAFT_2668 at 2706.199 kb on + strand, within EX28DRAFT_2668 at 2706.199 kb on + strand, within EX28DRAFT_2668 at 2706.199 kb on + strand, within EX28DRAFT_2668 at 2706.199 kb on + strand, within EX28DRAFT_2668 at 2706.200 kb on - strand, within EX28DRAFT_2668 at 2706.200 kb on - strand, within EX28DRAFT_2668 at 2706.397 kb on + strand, within EX28DRAFT_2668 at 2706.397 kb on + strand, within EX28DRAFT_2668 at 2706.568 kb on + strand, within EX28DRAFT_2668 at 2706.569 kb on - strand, within EX28DRAFT_2668 at 2706.660 kb on + strand, within EX28DRAFT_2668 at 2707.072 kb on - strand at 2707.144 kb on - strand at 2707.149 kb on + strand at 2707.301 kb on + strand at 2707.301 kb on + strand at 2707.348 kb on + strand at 2707.349 kb on - strand at 2707.359 kb on - strand at 2707.359 kb on - strand at 2707.359 kb on - strand at 2707.416 kb on + strand at 2707.753 kb on + strand, within EX28DRAFT_2669 at 2707.753 kb on + strand, within EX28DRAFT_2669 at 2707.876 kb on + strand, within EX28DRAFT_2669 at 2707.876 kb on + strand, within EX28DRAFT_2669 at 2707.876 kb on + strand, within EX28DRAFT_2669 at 2707.877 kb on - strand, within EX28DRAFT_2669 at 2707.928 kb on + strand, within EX28DRAFT_2669 at 2707.954 kb on + strand, within EX28DRAFT_2669 at 2707.954 kb on + strand, within EX28DRAFT_2669 at 2707.955 kb on - strand, within EX28DRAFT_2669 at 2708.002 kb on + strand, within EX28DRAFT_2669 at 2708.212 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 2,703,926 - -0.3 2,703,976 + +0.0 2,703,976 + -0.3 2,703,976 + +0.6 2,703,977 - -0.1 2,703,977 - +1.3 2,704,024 - +0.0 2,704,024 - -0.2 2,704,026 + +0.2 2,704,026 + -0.0 2,704,027 - +0.1 2,704,027 - -1.4 2,704,030 + -0.1 2,704,030 + -0.7 2,704,031 - -0.8 2,704,609 + -2.9 2,704,632 - +0.1 2,704,673 + -0.0 2,704,746 - -1.0 2,704,787 + +0.8 2,704,795 + +1.0 2,704,796 - -0.1 2,704,895 - +0.5 2,704,895 - +0.2 2,705,034 + +0.9 2,705,034 + -0.7 2,705,181 + EX28DRAFT_2668 0.14 +0.0 2,705,181 + EX28DRAFT_2668 0.14 +0.4 2,705,181 + EX28DRAFT_2668 0.14 +0.4 2,705,181 + EX28DRAFT_2668 0.14 +0.6 2,705,181 + EX28DRAFT_2668 0.14 -0.7 2,705,182 - EX28DRAFT_2668 0.14 +0.7 2,705,224 - EX28DRAFT_2668 0.16 +0.2 2,705,383 + EX28DRAFT_2668 0.22 -0.1 2,705,384 - EX28DRAFT_2668 0.22 +0.4 2,705,454 + EX28DRAFT_2668 0.25 +0.4 2,705,488 + EX28DRAFT_2668 0.26 -0.8 2,705,678 - EX28DRAFT_2668 0.34 +0.3 2,705,679 + EX28DRAFT_2668 0.34 -0.5 2,705,679 + EX28DRAFT_2668 0.34 +0.6 2,705,680 - EX28DRAFT_2668 0.34 +0.4 2,705,680 - EX28DRAFT_2668 0.34 -0.3 2,705,772 + EX28DRAFT_2668 0.38 +0.1 2,705,773 - EX28DRAFT_2668 0.38 +1.4 2,705,894 - EX28DRAFT_2668 0.43 -0.3 2,705,934 + EX28DRAFT_2668 0.45 +0.2 2,706,149 - EX28DRAFT_2668 0.53 +0.5 2,706,149 - EX28DRAFT_2668 0.53 +0.2 2,706,156 + EX28DRAFT_2668 0.54 +1.1 2,706,199 + EX28DRAFT_2668 0.55 +0.2 2,706,199 + EX28DRAFT_2668 0.55 +0.1 2,706,199 + EX28DRAFT_2668 0.55 +0.2 2,706,199 + EX28DRAFT_2668 0.55 +0.2 2,706,199 + EX28DRAFT_2668 0.55 -0.3 2,706,200 - EX28DRAFT_2668 0.56 +0.3 2,706,200 - EX28DRAFT_2668 0.56 +0.5 2,706,397 + EX28DRAFT_2668 0.64 +0.3 2,706,397 + EX28DRAFT_2668 0.64 -0.6 2,706,568 + EX28DRAFT_2668 0.71 +0.7 2,706,569 - EX28DRAFT_2668 0.71 +0.1 2,706,660 + EX28DRAFT_2668 0.74 +1.1 2,707,072 - -0.0 2,707,144 - +0.4 2,707,149 + +0.8 2,707,301 + -0.2 2,707,301 + -0.4 2,707,348 + +0.4 2,707,349 - +0.2 2,707,359 - +0.0 2,707,359 - +0.5 2,707,359 - -0.4 2,707,416 + +1.1 2,707,753 + EX28DRAFT_2669 0.46 +0.4 2,707,753 + EX28DRAFT_2669 0.46 -0.4 2,707,876 + EX28DRAFT_2669 0.62 +0.7 2,707,876 + EX28DRAFT_2669 0.62 +0.3 2,707,876 + EX28DRAFT_2669 0.62 -0.1 2,707,877 - EX28DRAFT_2669 0.62 +0.7 2,707,928 + EX28DRAFT_2669 0.69 -0.7 2,707,954 + EX28DRAFT_2669 0.72 -0.4 2,707,954 + EX28DRAFT_2669 0.72 -0.1 2,707,955 - EX28DRAFT_2669 0.73 +0.1 2,708,002 + EX28DRAFT_2669 0.79 +0.5 2,708,212 - +0.6
Or see this region's nucleotide sequence