Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2567 and EX28DRAFT_2568 are separated by 127 nucleotides EX28DRAFT_2568 and EX28DRAFT_2569 are separated by 43 nucleotides EX28DRAFT_2569 and EX28DRAFT_2570 overlap by 4 nucleotides
EX28DRAFT_2567: EX28DRAFT_2567 - Uncharacterized protein conserved in bacteria, at 2,598,205 to 2,598,786
_2567
EX28DRAFT_2568: EX28DRAFT_2568 - Peroxiredoxin, at 2,598,914 to 2,599,516
_2568
EX28DRAFT_2569: EX28DRAFT_2569 - Protein of unknown function (DUF3999), at 2,599,560 to 2,600,945
_2569
EX28DRAFT_2570: EX28DRAFT_2570 - Predicted membrane protein, at 2,600,942 to 2,603,557
_2570
Position (kb)
2599
2600
2601 Strain fitness (log2 ratio)
-1
0
1
2 at 2598.577 kb on - strand, within EX28DRAFT_2567 at 2598.580 kb on + strand, within EX28DRAFT_2567 at 2598.580 kb on + strand, within EX28DRAFT_2567 at 2598.580 kb on + strand, within EX28DRAFT_2567 at 2598.580 kb on + strand, within EX28DRAFT_2567 at 2598.580 kb on + strand, within EX28DRAFT_2567 at 2598.580 kb on + strand, within EX28DRAFT_2567 at 2598.580 kb on + strand, within EX28DRAFT_2567 at 2598.581 kb on - strand, within EX28DRAFT_2567 at 2598.581 kb on - strand, within EX28DRAFT_2567 at 2598.581 kb on - strand, within EX28DRAFT_2567 at 2598.581 kb on - strand, within EX28DRAFT_2567 at 2598.694 kb on + strand, within EX28DRAFT_2567 at 2598.712 kb on + strand, within EX28DRAFT_2567 at 2598.713 kb on - strand, within EX28DRAFT_2567 at 2598.713 kb on - strand, within EX28DRAFT_2567 at 2598.845 kb on - strand at 2598.861 kb on + strand at 2598.894 kb on - strand at 2598.896 kb on + strand at 2598.900 kb on + strand at 2598.901 kb on - strand at 2598.901 kb on - strand at 2598.914 kb on - strand at 2599.016 kb on - strand, within EX28DRAFT_2568 at 2599.155 kb on + strand, within EX28DRAFT_2568 at 2599.212 kb on - strand, within EX28DRAFT_2568 at 2599.212 kb on - strand, within EX28DRAFT_2568 at 2599.361 kb on - strand, within EX28DRAFT_2568 at 2599.483 kb on + strand at 2599.488 kb on - strand at 2599.568 kb on + strand at 2599.759 kb on + strand, within EX28DRAFT_2569 at 2599.760 kb on - strand, within EX28DRAFT_2569 at 2599.760 kb on - strand, within EX28DRAFT_2569 at 2599.760 kb on - strand, within EX28DRAFT_2569 at 2599.760 kb on - strand, within EX28DRAFT_2569 at 2599.800 kb on + strand, within EX28DRAFT_2569 at 2599.843 kb on + strand, within EX28DRAFT_2569 at 2599.843 kb on + strand, within EX28DRAFT_2569 at 2599.843 kb on + strand, within EX28DRAFT_2569 at 2599.912 kb on + strand, within EX28DRAFT_2569 at 2599.912 kb on + strand, within EX28DRAFT_2569 at 2600.286 kb on - strand, within EX28DRAFT_2569 at 2600.333 kb on + strand, within EX28DRAFT_2569 at 2600.334 kb on - strand, within EX28DRAFT_2569 at 2600.387 kb on + strand, within EX28DRAFT_2569 at 2600.387 kb on + strand, within EX28DRAFT_2569 at 2600.399 kb on + strand, within EX28DRAFT_2569 at 2600.414 kb on - strand, within EX28DRAFT_2569 at 2600.453 kb on + strand, within EX28DRAFT_2569 at 2600.768 kb on + strand, within EX28DRAFT_2569 at 2600.768 kb on + strand, within EX28DRAFT_2569 at 2600.769 kb on - strand, within EX28DRAFT_2569 at 2600.829 kb on - strand at 2600.852 kb on - strand at 2601.073 kb on + strand at 2601.223 kb on + strand, within EX28DRAFT_2570 at 2601.346 kb on - strand, within EX28DRAFT_2570 at 2601.346 kb on - strand, within EX28DRAFT_2570 at 2601.482 kb on + strand, within EX28DRAFT_2570 at 2601.526 kb on - strand, within EX28DRAFT_2570 at 2601.585 kb on - strand, within EX28DRAFT_2570 at 2601.585 kb on - strand, within EX28DRAFT_2570 at 2601.586 kb on + strand, within EX28DRAFT_2570 at 2601.587 kb on - strand, within EX28DRAFT_2570 at 2601.587 kb on - strand, within EX28DRAFT_2570 at 2601.587 kb on - strand, within EX28DRAFT_2570 at 2601.587 kb on - strand, within EX28DRAFT_2570 at 2601.865 kb on + strand, within EX28DRAFT_2570 at 2601.865 kb on + strand, within EX28DRAFT_2570
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 2,598,577 - EX28DRAFT_2567 0.64 -0.0 2,598,580 + EX28DRAFT_2567 0.64 -0.2 2,598,580 + EX28DRAFT_2567 0.64 -0.1 2,598,580 + EX28DRAFT_2567 0.64 -0.6 2,598,580 + EX28DRAFT_2567 0.64 +0.3 2,598,580 + EX28DRAFT_2567 0.64 -0.4 2,598,580 + EX28DRAFT_2567 0.64 -0.8 2,598,580 + EX28DRAFT_2567 0.64 -0.1 2,598,581 - EX28DRAFT_2567 0.65 -0.9 2,598,581 - EX28DRAFT_2567 0.65 +0.9 2,598,581 - EX28DRAFT_2567 0.65 -0.6 2,598,581 - EX28DRAFT_2567 0.65 +0.1 2,598,694 + EX28DRAFT_2567 0.84 -0.7 2,598,712 + EX28DRAFT_2567 0.87 -0.8 2,598,713 - EX28DRAFT_2567 0.87 -0.0 2,598,713 - EX28DRAFT_2567 0.87 -0.5 2,598,845 - -0.5 2,598,861 + -0.4 2,598,894 - -0.6 2,598,896 + -0.4 2,598,900 + +0.1 2,598,901 - -1.1 2,598,901 - +0.1 2,598,914 - -0.1 2,599,016 - EX28DRAFT_2568 0.17 +0.2 2,599,155 + EX28DRAFT_2568 0.40 +0.4 2,599,212 - EX28DRAFT_2568 0.49 -0.8 2,599,212 - EX28DRAFT_2568 0.49 +0.2 2,599,361 - EX28DRAFT_2568 0.74 -0.0 2,599,483 + -1.2 2,599,488 - +0.9 2,599,568 + -0.0 2,599,759 + EX28DRAFT_2569 0.14 +0.2 2,599,760 - EX28DRAFT_2569 0.14 +0.6 2,599,760 - EX28DRAFT_2569 0.14 +0.0 2,599,760 - EX28DRAFT_2569 0.14 -0.2 2,599,760 - EX28DRAFT_2569 0.14 +0.2 2,599,800 + EX28DRAFT_2569 0.17 +0.4 2,599,843 + EX28DRAFT_2569 0.20 -0.1 2,599,843 + EX28DRAFT_2569 0.20 +0.3 2,599,843 + EX28DRAFT_2569 0.20 +0.4 2,599,912 + EX28DRAFT_2569 0.25 +0.5 2,599,912 + EX28DRAFT_2569 0.25 +0.3 2,600,286 - EX28DRAFT_2569 0.52 +0.5 2,600,333 + EX28DRAFT_2569 0.56 -0.4 2,600,334 - EX28DRAFT_2569 0.56 -0.1 2,600,387 + EX28DRAFT_2569 0.60 +0.4 2,600,387 + EX28DRAFT_2569 0.60 +0.5 2,600,399 + EX28DRAFT_2569 0.61 +0.6 2,600,414 - EX28DRAFT_2569 0.62 +1.6 2,600,453 + EX28DRAFT_2569 0.64 +0.1 2,600,768 + EX28DRAFT_2569 0.87 -0.1 2,600,768 + EX28DRAFT_2569 0.87 -0.3 2,600,769 - EX28DRAFT_2569 0.87 +0.1 2,600,829 - -0.0 2,600,852 - -0.2 2,601,073 + -0.4 2,601,223 + EX28DRAFT_2570 0.11 +0.4 2,601,346 - EX28DRAFT_2570 0.15 +0.4 2,601,346 - EX28DRAFT_2570 0.15 +0.3 2,601,482 + EX28DRAFT_2570 0.21 -1.0 2,601,526 - EX28DRAFT_2570 0.22 +1.4 2,601,585 - EX28DRAFT_2570 0.25 -0.3 2,601,585 - EX28DRAFT_2570 0.25 +0.2 2,601,586 + EX28DRAFT_2570 0.25 -0.5 2,601,587 - EX28DRAFT_2570 0.25 -0.2 2,601,587 - EX28DRAFT_2570 0.25 -0.1 2,601,587 - EX28DRAFT_2570 0.25 +2.0 2,601,587 - EX28DRAFT_2570 0.25 +0.1 2,601,865 + EX28DRAFT_2570 0.35 -0.7 2,601,865 + EX28DRAFT_2570 0.35 +0.0
Or see this region's nucleotide sequence