Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2148 and EX28DRAFT_2149 are separated by 42 nucleotides EX28DRAFT_2149 and EX28DRAFT_2150 are separated by 15 nucleotides
EX28DRAFT_2148: EX28DRAFT_2148 - Uncharacterized protein conserved in bacteria, at 2,172,762 to 2,173,682
_2148
EX28DRAFT_2149: EX28DRAFT_2149 - Transcriptional regulators, at 2,173,725 to 2,174,441
_2149
EX28DRAFT_2150: EX28DRAFT_2150 - PTS system, lactose/cellobiose family IIC component, at 2,174,457 to 2,175,779
_2150
Position (kb)
2173
2174
2175 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2172.745 kb on + strand at 2172.745 kb on + strand at 2172.745 kb on + strand at 2172.746 kb on - strand at 2172.746 kb on - strand at 2172.746 kb on - strand at 2172.749 kb on + strand at 2172.749 kb on + strand at 2172.776 kb on - strand at 2172.925 kb on - strand, within EX28DRAFT_2148 at 2172.956 kb on + strand, within EX28DRAFT_2148 at 2172.990 kb on + strand, within EX28DRAFT_2148 at 2173.020 kb on - strand, within EX28DRAFT_2148 at 2173.092 kb on + strand, within EX28DRAFT_2148 at 2173.096 kb on - strand, within EX28DRAFT_2148 at 2173.096 kb on - strand, within EX28DRAFT_2148 at 2173.317 kb on + strand, within EX28DRAFT_2148 at 2173.506 kb on + strand, within EX28DRAFT_2148 at 2173.684 kb on - strand at 2173.783 kb on + strand at 2173.810 kb on + strand, within EX28DRAFT_2149 at 2173.810 kb on + strand, within EX28DRAFT_2149 at 2173.833 kb on + strand, within EX28DRAFT_2149 at 2173.946 kb on - strand, within EX28DRAFT_2149 at 2174.065 kb on + strand, within EX28DRAFT_2149 at 2174.066 kb on - strand, within EX28DRAFT_2149 at 2174.066 kb on - strand, within EX28DRAFT_2149 at 2174.066 kb on - strand, within EX28DRAFT_2149 at 2174.380 kb on + strand at 2174.381 kb on - strand at 2174.428 kb on + strand at 2174.429 kb on - strand at 2174.429 kb on - strand at 2174.429 kb on - strand at 2174.518 kb on + strand at 2174.518 kb on + strand at 2174.660 kb on + strand, within EX28DRAFT_2150 at 2174.660 kb on + strand, within EX28DRAFT_2150 at 2174.773 kb on - strand, within EX28DRAFT_2150 at 2174.773 kb on - strand, within EX28DRAFT_2150 at 2174.904 kb on - strand, within EX28DRAFT_2150 at 2174.913 kb on - strand, within EX28DRAFT_2150 at 2175.046 kb on + strand, within EX28DRAFT_2150 at 2175.113 kb on + strand, within EX28DRAFT_2150 at 2175.113 kb on + strand, within EX28DRAFT_2150 at 2175.114 kb on - strand, within EX28DRAFT_2150 at 2175.114 kb on - strand, within EX28DRAFT_2150 at 2175.398 kb on + strand, within EX28DRAFT_2150
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 2,172,745 + +0.1 2,172,745 + -0.2 2,172,745 + -0.8 2,172,746 - -0.2 2,172,746 - -0.7 2,172,746 - -1.1 2,172,749 + +0.7 2,172,749 + +0.7 2,172,776 - +0.9 2,172,925 - EX28DRAFT_2148 0.18 +1.9 2,172,956 + EX28DRAFT_2148 0.21 -0.8 2,172,990 + EX28DRAFT_2148 0.25 +0.3 2,173,020 - EX28DRAFT_2148 0.28 -1.9 2,173,092 + EX28DRAFT_2148 0.36 -1.0 2,173,096 - EX28DRAFT_2148 0.36 -1.2 2,173,096 - EX28DRAFT_2148 0.36 +0.2 2,173,317 + EX28DRAFT_2148 0.60 -0.5 2,173,506 + EX28DRAFT_2148 0.81 -0.8 2,173,684 - +1.4 2,173,783 + +0.1 2,173,810 + EX28DRAFT_2149 0.12 +0.0 2,173,810 + EX28DRAFT_2149 0.12 -0.6 2,173,833 + EX28DRAFT_2149 0.15 -1.0 2,173,946 - EX28DRAFT_2149 0.31 -0.6 2,174,065 + EX28DRAFT_2149 0.47 +0.1 2,174,066 - EX28DRAFT_2149 0.48 -0.0 2,174,066 - EX28DRAFT_2149 0.48 -0.1 2,174,066 - EX28DRAFT_2149 0.48 -0.2 2,174,380 + -0.2 2,174,381 - +0.1 2,174,428 + -0.1 2,174,429 - -0.1 2,174,429 - -0.7 2,174,429 - -0.3 2,174,518 + -0.4 2,174,518 + -1.0 2,174,660 + EX28DRAFT_2150 0.15 -1.1 2,174,660 + EX28DRAFT_2150 0.15 +0.4 2,174,773 - EX28DRAFT_2150 0.24 -0.3 2,174,773 - EX28DRAFT_2150 0.24 -0.3 2,174,904 - EX28DRAFT_2150 0.34 +0.0 2,174,913 - EX28DRAFT_2150 0.34 -1.2 2,175,046 + EX28DRAFT_2150 0.45 +1.2 2,175,113 + EX28DRAFT_2150 0.50 -0.6 2,175,113 + EX28DRAFT_2150 0.50 +0.2 2,175,114 - EX28DRAFT_2150 0.50 -0.1 2,175,114 - EX28DRAFT_2150 0.50 +0.7 2,175,398 + EX28DRAFT_2150 0.71 +0.4
Or see this region's nucleotide sequence