Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_2130

Experiment: MS_media with m-arsenite 1 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEX28DRAFT_2129 and EX28DRAFT_2130 are separated by 107 nucleotidesEX28DRAFT_2130 and EX28DRAFT_2131 are separated by 216 nucleotides EX28DRAFT_2129: EX28DRAFT_2129 - Glucose/sorbosone dehydrogenases, at 2,147,524 to 2,148,642 _2129 EX28DRAFT_2130: EX28DRAFT_2130 - Biofilm formation protein (YliH/bssR), at 2,148,750 to 2,149,133 _2130 EX28DRAFT_2131: EX28DRAFT_2131 - ribosomal protein S12 methylthiotransferase RimO, at 2,149,350 to 2,150,675 _2131 Position (kb) 2148 2149 2150Strain fitness (log2 ratio) -1 0 1at 2147.861 kb on + strand, within EX28DRAFT_2129at 2147.861 kb on + strand, within EX28DRAFT_2129at 2147.862 kb on - strand, within EX28DRAFT_2129at 2147.866 kb on - strand, within EX28DRAFT_2129at 2147.894 kb on + strand, within EX28DRAFT_2129at 2148.112 kb on - strand, within EX28DRAFT_2129at 2148.141 kb on + strand, within EX28DRAFT_2129at 2148.265 kb on - strand, within EX28DRAFT_2129at 2148.504 kb on + strand, within EX28DRAFT_2129at 2148.505 kb on - strand, within EX28DRAFT_2129at 2148.642 kb on + strandat 2148.671 kb on - strandat 2148.719 kb on - strandat 2148.883 kb on - strand, within EX28DRAFT_2130at 2149.034 kb on + strand, within EX28DRAFT_2130at 2149.034 kb on + strand, within EX28DRAFT_2130at 2149.035 kb on - strand, within EX28DRAFT_2130at 2149.035 kb on - strand, within EX28DRAFT_2130at 2149.035 kb on - strand, within EX28DRAFT_2130at 2149.036 kb on + strand, within EX28DRAFT_2130at 2149.037 kb on - strand, within EX28DRAFT_2130at 2149.037 kb on - strand, within EX28DRAFT_2130at 2149.037 kb on - strand, within EX28DRAFT_2130at 2149.164 kb on + strandat 2149.233 kb on - strandat 2149.236 kb on + strandat 2149.237 kb on - strandat 2149.237 kb on - strandat 2149.282 kb on + strandat 2149.283 kb on - strandat 2149.283 kb on - strandat 2149.283 kb on - strandat 2149.284 kb on + strandat 2149.284 kb on + strandat 2149.285 kb on - strandat 2149.285 kb on - strandat 2149.298 kb on + strandat 2149.305 kb on + strandat 2149.330 kb on - strandat 2149.474 kb on - strandat 2149.695 kb on + strand, within EX28DRAFT_2131at 2149.695 kb on + strand, within EX28DRAFT_2131at 2149.777 kb on - strand, within EX28DRAFT_2131at 2149.777 kb on - strand, within EX28DRAFT_2131at 2149.777 kb on - strand, within EX28DRAFT_2131at 2150.059 kb on - strand, within EX28DRAFT_2131

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Per-strain Table

Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM
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2,147,861 + EX28DRAFT_2129 0.30 -0.2
2,147,861 + EX28DRAFT_2129 0.30 -1.4
2,147,862 - EX28DRAFT_2129 0.30 +0.1
2,147,866 - EX28DRAFT_2129 0.31 +0.2
2,147,894 + EX28DRAFT_2129 0.33 -0.4
2,148,112 - EX28DRAFT_2129 0.53 -0.3
2,148,141 + EX28DRAFT_2129 0.55 -0.9
2,148,265 - EX28DRAFT_2129 0.66 +0.1
2,148,504 + EX28DRAFT_2129 0.88 -0.1
2,148,505 - EX28DRAFT_2129 0.88 -0.0
2,148,642 + -0.9
2,148,671 - +0.4
2,148,719 - -0.2
2,148,883 - EX28DRAFT_2130 0.35 -0.5
2,149,034 + EX28DRAFT_2130 0.74 -0.3
2,149,034 + EX28DRAFT_2130 0.74 +0.3
2,149,035 - EX28DRAFT_2130 0.74 -1.0
2,149,035 - EX28DRAFT_2130 0.74 +0.2
2,149,035 - EX28DRAFT_2130 0.74 -0.8
2,149,036 + EX28DRAFT_2130 0.74 +0.1
2,149,037 - EX28DRAFT_2130 0.75 -1.1
2,149,037 - EX28DRAFT_2130 0.75 -0.7
2,149,037 - EX28DRAFT_2130 0.75 -1.3
2,149,164 + +0.2
2,149,233 - +0.3
2,149,236 + -0.1
2,149,237 - -0.4
2,149,237 - +0.1
2,149,282 + -0.1
2,149,283 - +1.2
2,149,283 - +0.4
2,149,283 - +1.5
2,149,284 + +0.3
2,149,284 + +0.0
2,149,285 - -0.6
2,149,285 - +1.5
2,149,298 + +0.2
2,149,305 + -0.1
2,149,330 - +0.4
2,149,474 - -0.5
2,149,695 + EX28DRAFT_2131 0.26 +0.6
2,149,695 + EX28DRAFT_2131 0.26 -0.5
2,149,777 - EX28DRAFT_2131 0.32 -1.0
2,149,777 - EX28DRAFT_2131 0.32 +0.1
2,149,777 - EX28DRAFT_2131 0.32 -0.6
2,150,059 - EX28DRAFT_2131 0.53 -0.8

Or see this region's nucleotide sequence