Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1511 and EX28DRAFT_1512 are separated by 3 nucleotides EX28DRAFT_1512 and EX28DRAFT_1513 are separated by 28 nucleotides
EX28DRAFT_1511: EX28DRAFT_1511 - Predicted permease, at 1,524,978 to 1,526,012
_1511
EX28DRAFT_1512: EX28DRAFT_1512 - NADPH:quinone reductase and related Zn-dependent oxidoreductases, at 1,526,016 to 1,526,963
_1512
EX28DRAFT_1513: EX28DRAFT_1513 - Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases, at 1,526,992 to 1,528,017
_1513
Position (kb)
1526
1527 Strain fitness (log2 ratio)
-1
0
1 at 1525.046 kb on - strand at 1525.077 kb on - strand at 1525.088 kb on + strand, within EX28DRAFT_1511 at 1525.119 kb on - strand, within EX28DRAFT_1511 at 1525.266 kb on + strand, within EX28DRAFT_1511 at 1525.266 kb on + strand, within EX28DRAFT_1511 at 1525.356 kb on + strand, within EX28DRAFT_1511 at 1525.357 kb on - strand, within EX28DRAFT_1511 at 1525.359 kb on - strand, within EX28DRAFT_1511 at 1525.680 kb on + strand, within EX28DRAFT_1511 at 1525.680 kb on + strand, within EX28DRAFT_1511 at 1525.680 kb on + strand, within EX28DRAFT_1511 at 1525.680 kb on + strand, within EX28DRAFT_1511 at 1525.680 kb on + strand, within EX28DRAFT_1511 at 1525.681 kb on - strand, within EX28DRAFT_1511 at 1525.681 kb on - strand, within EX28DRAFT_1511 at 1525.681 kb on - strand, within EX28DRAFT_1511 at 1525.682 kb on + strand, within EX28DRAFT_1511 at 1525.753 kb on - strand, within EX28DRAFT_1511 at 1526.007 kb on - strand at 1526.011 kb on - strand at 1526.066 kb on - strand at 1526.069 kb on + strand at 1526.119 kb on + strand, within EX28DRAFT_1512 at 1526.138 kb on + strand, within EX28DRAFT_1512 at 1526.342 kb on - strand, within EX28DRAFT_1512 at 1526.595 kb on - strand, within EX28DRAFT_1512 at 1526.596 kb on + strand, within EX28DRAFT_1512 at 1526.596 kb on + strand, within EX28DRAFT_1512 at 1526.596 kb on + strand, within EX28DRAFT_1512 at 1526.597 kb on - strand, within EX28DRAFT_1512 at 1526.597 kb on - strand, within EX28DRAFT_1512 at 1526.597 kb on - strand, within EX28DRAFT_1512 at 1526.597 kb on - strand, within EX28DRAFT_1512 at 1526.597 kb on - strand, within EX28DRAFT_1512 at 1526.597 kb on - strand, within EX28DRAFT_1512 at 1526.647 kb on + strand, within EX28DRAFT_1512 at 1526.647 kb on + strand, within EX28DRAFT_1512 at 1526.648 kb on - strand, within EX28DRAFT_1512 at 1526.648 kb on - strand, within EX28DRAFT_1512 at 1526.668 kb on + strand, within EX28DRAFT_1512 at 1527.057 kb on - strand at 1527.088 kb on + strand at 1527.089 kb on - strand at 1527.091 kb on + strand at 1527.092 kb on - strand at 1527.092 kb on - strand at 1527.161 kb on + strand, within EX28DRAFT_1513 at 1527.239 kb on + strand, within EX28DRAFT_1513 at 1527.307 kb on - strand, within EX28DRAFT_1513 at 1527.472 kb on - strand, within EX28DRAFT_1513 at 1527.472 kb on - strand, within EX28DRAFT_1513 at 1527.472 kb on - strand, within EX28DRAFT_1513 at 1527.472 kb on - strand, within EX28DRAFT_1513 at 1527.534 kb on + strand, within EX28DRAFT_1513 at 1527.534 kb on + strand, within EX28DRAFT_1513 at 1527.535 kb on - strand, within EX28DRAFT_1513 at 1527.535 kb on - strand, within EX28DRAFT_1513 at 1527.752 kb on + strand, within EX28DRAFT_1513 at 1527.752 kb on + strand, within EX28DRAFT_1513 at 1527.753 kb on - strand, within EX28DRAFT_1513 at 1527.753 kb on - strand, within EX28DRAFT_1513 at 1527.753 kb on - strand, within EX28DRAFT_1513 at 1527.849 kb on + strand, within EX28DRAFT_1513 at 1527.849 kb on + strand, within EX28DRAFT_1513 at 1527.881 kb on + strand, within EX28DRAFT_1513 at 1527.884 kb on - strand, within EX28DRAFT_1513
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 1,525,046 - -1.3 1,525,077 - +0.5 1,525,088 + EX28DRAFT_1511 0.11 +0.6 1,525,119 - EX28DRAFT_1511 0.14 +0.2 1,525,266 + EX28DRAFT_1511 0.28 -0.8 1,525,266 + EX28DRAFT_1511 0.28 +0.2 1,525,356 + EX28DRAFT_1511 0.37 -0.4 1,525,357 - EX28DRAFT_1511 0.37 +0.1 1,525,359 - EX28DRAFT_1511 0.37 -0.4 1,525,680 + EX28DRAFT_1511 0.68 +0.2 1,525,680 + EX28DRAFT_1511 0.68 +0.1 1,525,680 + EX28DRAFT_1511 0.68 +0.0 1,525,680 + EX28DRAFT_1511 0.68 -0.8 1,525,680 + EX28DRAFT_1511 0.68 -0.1 1,525,681 - EX28DRAFT_1511 0.68 +0.2 1,525,681 - EX28DRAFT_1511 0.68 +0.2 1,525,681 - EX28DRAFT_1511 0.68 +0.4 1,525,682 + EX28DRAFT_1511 0.68 +0.3 1,525,753 - EX28DRAFT_1511 0.75 +0.2 1,526,007 - -0.4 1,526,011 - -0.3 1,526,066 - -0.1 1,526,069 + +0.2 1,526,119 + EX28DRAFT_1512 0.11 +0.8 1,526,138 + EX28DRAFT_1512 0.13 +0.2 1,526,342 - EX28DRAFT_1512 0.34 +0.2 1,526,595 - EX28DRAFT_1512 0.61 -0.2 1,526,596 + EX28DRAFT_1512 0.61 +0.8 1,526,596 + EX28DRAFT_1512 0.61 +0.2 1,526,596 + EX28DRAFT_1512 0.61 +0.5 1,526,597 - EX28DRAFT_1512 0.61 +0.8 1,526,597 - EX28DRAFT_1512 0.61 +0.7 1,526,597 - EX28DRAFT_1512 0.61 +0.3 1,526,597 - EX28DRAFT_1512 0.61 -0.2 1,526,597 - EX28DRAFT_1512 0.61 +0.0 1,526,597 - EX28DRAFT_1512 0.61 +0.0 1,526,647 + EX28DRAFT_1512 0.67 +0.0 1,526,647 + EX28DRAFT_1512 0.67 -0.2 1,526,648 - EX28DRAFT_1512 0.67 +0.2 1,526,648 - EX28DRAFT_1512 0.67 +0.4 1,526,668 + EX28DRAFT_1512 0.69 +1.4 1,527,057 - -0.4 1,527,088 + -0.1 1,527,089 - -1.0 1,527,091 + -0.1 1,527,092 - -0.7 1,527,092 - -0.2 1,527,161 + EX28DRAFT_1513 0.16 +0.4 1,527,239 + EX28DRAFT_1513 0.24 -0.3 1,527,307 - EX28DRAFT_1513 0.31 -0.3 1,527,472 - EX28DRAFT_1513 0.47 +0.6 1,527,472 - EX28DRAFT_1513 0.47 -0.2 1,527,472 - EX28DRAFT_1513 0.47 -0.0 1,527,472 - EX28DRAFT_1513 0.47 +0.2 1,527,534 + EX28DRAFT_1513 0.53 -0.4 1,527,534 + EX28DRAFT_1513 0.53 -0.1 1,527,535 - EX28DRAFT_1513 0.53 +0.8 1,527,535 - EX28DRAFT_1513 0.53 +1.2 1,527,752 + EX28DRAFT_1513 0.74 +0.6 1,527,752 + EX28DRAFT_1513 0.74 +0.2 1,527,753 - EX28DRAFT_1513 0.74 +0.0 1,527,753 - EX28DRAFT_1513 0.74 +0.1 1,527,753 - EX28DRAFT_1513 0.74 +0.0 1,527,849 + EX28DRAFT_1513 0.84 -0.4 1,527,849 + EX28DRAFT_1513 0.84 -0.3 1,527,881 + EX28DRAFT_1513 0.87 +0.4 1,527,884 - EX28DRAFT_1513 0.87 +0.5
Or see this region's nucleotide sequence