Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1140 and EX28DRAFT_1141 overlap by 16 nucleotides EX28DRAFT_1141 and EX28DRAFT_1142 overlap by 4 nucleotides
EX28DRAFT_1140: EX28DRAFT_1140 - Protein of unknown function (DUF3131), at 1,156,297 to 1,157,691
_1140
EX28DRAFT_1141: EX28DRAFT_1141 - Protein of unknown function (DUF3131), at 1,157,676 to 1,159,223
_1141
EX28DRAFT_1142: EX28DRAFT_1142 - Protein of unknown function (DUF3131), at 1,159,220 to 1,160,551
_1142
Position (kb)
1157
1158
1159
1160 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1156.704 kb on + strand, within EX28DRAFT_1140 at 1156.705 kb on - strand, within EX28DRAFT_1140 at 1156.875 kb on + strand, within EX28DRAFT_1140 at 1156.875 kb on + strand, within EX28DRAFT_1140 at 1156.875 kb on + strand, within EX28DRAFT_1140 at 1156.876 kb on - strand, within EX28DRAFT_1140 at 1156.878 kb on - strand, within EX28DRAFT_1140 at 1156.878 kb on - strand, within EX28DRAFT_1140 at 1157.151 kb on + strand, within EX28DRAFT_1140 at 1157.168 kb on + strand, within EX28DRAFT_1140 at 1157.369 kb on + strand, within EX28DRAFT_1140 at 1157.714 kb on + strand at 1158.044 kb on - strand, within EX28DRAFT_1141 at 1158.047 kb on - strand, within EX28DRAFT_1141 at 1158.100 kb on + strand, within EX28DRAFT_1141 at 1158.203 kb on - strand, within EX28DRAFT_1141 at 1158.235 kb on + strand, within EX28DRAFT_1141 at 1158.235 kb on + strand, within EX28DRAFT_1141 at 1158.236 kb on - strand, within EX28DRAFT_1141 at 1158.290 kb on + strand, within EX28DRAFT_1141 at 1158.409 kb on + strand, within EX28DRAFT_1141 at 1158.418 kb on + strand, within EX28DRAFT_1141 at 1158.436 kb on + strand, within EX28DRAFT_1141 at 1158.436 kb on + strand, within EX28DRAFT_1141 at 1158.436 kb on + strand, within EX28DRAFT_1141 at 1158.437 kb on - strand, within EX28DRAFT_1141 at 1158.437 kb on - strand, within EX28DRAFT_1141 at 1158.437 kb on - strand, within EX28DRAFT_1141 at 1158.437 kb on - strand, within EX28DRAFT_1141 at 1158.441 kb on - strand, within EX28DRAFT_1141 at 1158.441 kb on - strand, within EX28DRAFT_1141 at 1158.452 kb on + strand, within EX28DRAFT_1141 at 1158.542 kb on + strand, within EX28DRAFT_1141 at 1158.543 kb on - strand, within EX28DRAFT_1141 at 1158.574 kb on + strand, within EX28DRAFT_1141 at 1158.607 kb on + strand, within EX28DRAFT_1141 at 1158.607 kb on + strand, within EX28DRAFT_1141 at 1158.607 kb on + strand, within EX28DRAFT_1141 at 1158.640 kb on + strand, within EX28DRAFT_1141 at 1158.712 kb on + strand, within EX28DRAFT_1141 at 1158.806 kb on - strand, within EX28DRAFT_1141 at 1158.833 kb on + strand, within EX28DRAFT_1141 at 1158.835 kb on + strand, within EX28DRAFT_1141 at 1158.835 kb on + strand, within EX28DRAFT_1141 at 1158.878 kb on + strand, within EX28DRAFT_1141 at 1158.923 kb on + strand, within EX28DRAFT_1141 at 1158.924 kb on - strand, within EX28DRAFT_1141 at 1158.927 kb on + strand, within EX28DRAFT_1141 at 1158.927 kb on + strand, within EX28DRAFT_1141 at 1158.928 kb on - strand, within EX28DRAFT_1141 at 1159.017 kb on + strand, within EX28DRAFT_1141 at 1159.039 kb on + strand, within EX28DRAFT_1141 at 1159.039 kb on + strand, within EX28DRAFT_1141 at 1159.055 kb on - strand, within EX28DRAFT_1141 at 1159.302 kb on + strand at 1159.303 kb on - strand at 1159.366 kb on + strand, within EX28DRAFT_1142 at 1159.461 kb on + strand, within EX28DRAFT_1142 at 1159.566 kb on + strand, within EX28DRAFT_1142 at 1159.566 kb on + strand, within EX28DRAFT_1142 at 1159.567 kb on - strand, within EX28DRAFT_1142 at 1159.859 kb on - strand, within EX28DRAFT_1142 at 1159.870 kb on - strand, within EX28DRAFT_1142 at 1160.070 kb on - strand, within EX28DRAFT_1142 at 1160.119 kb on - strand, within EX28DRAFT_1142 at 1160.216 kb on - strand, within EX28DRAFT_1142
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 1,156,704 + EX28DRAFT_1140 0.29 +0.2 1,156,705 - EX28DRAFT_1140 0.29 -0.7 1,156,875 + EX28DRAFT_1140 0.41 -0.4 1,156,875 + EX28DRAFT_1140 0.41 -0.2 1,156,875 + EX28DRAFT_1140 0.41 +0.1 1,156,876 - EX28DRAFT_1140 0.42 -0.2 1,156,878 - EX28DRAFT_1140 0.42 -0.4 1,156,878 - EX28DRAFT_1140 0.42 +0.6 1,157,151 + EX28DRAFT_1140 0.61 -1.5 1,157,168 + EX28DRAFT_1140 0.62 -0.6 1,157,369 + EX28DRAFT_1140 0.77 +0.4 1,157,714 + +0.2 1,158,044 - EX28DRAFT_1141 0.24 +0.2 1,158,047 - EX28DRAFT_1141 0.24 -0.3 1,158,100 + EX28DRAFT_1141 0.27 +0.3 1,158,203 - EX28DRAFT_1141 0.34 -0.5 1,158,235 + EX28DRAFT_1141 0.36 -0.5 1,158,235 + EX28DRAFT_1141 0.36 -1.9 1,158,236 - EX28DRAFT_1141 0.36 +0.5 1,158,290 + EX28DRAFT_1141 0.40 +0.0 1,158,409 + EX28DRAFT_1141 0.47 +0.3 1,158,418 + EX28DRAFT_1141 0.48 +0.0 1,158,436 + EX28DRAFT_1141 0.49 -0.1 1,158,436 + EX28DRAFT_1141 0.49 +0.0 1,158,436 + EX28DRAFT_1141 0.49 -0.8 1,158,437 - EX28DRAFT_1141 0.49 -0.3 1,158,437 - EX28DRAFT_1141 0.49 +0.1 1,158,437 - EX28DRAFT_1141 0.49 -3.1 1,158,437 - EX28DRAFT_1141 0.49 -0.9 1,158,441 - EX28DRAFT_1141 0.49 -0.2 1,158,441 - EX28DRAFT_1141 0.49 -0.9 1,158,452 + EX28DRAFT_1141 0.50 +0.2 1,158,542 + EX28DRAFT_1141 0.56 +0.7 1,158,543 - EX28DRAFT_1141 0.56 -1.2 1,158,574 + EX28DRAFT_1141 0.58 -0.5 1,158,607 + EX28DRAFT_1141 0.60 +1.5 1,158,607 + EX28DRAFT_1141 0.60 +0.2 1,158,607 + EX28DRAFT_1141 0.60 -1.1 1,158,640 + EX28DRAFT_1141 0.62 +0.5 1,158,712 + EX28DRAFT_1141 0.67 -0.2 1,158,806 - EX28DRAFT_1141 0.73 +1.0 1,158,833 + EX28DRAFT_1141 0.75 +0.2 1,158,835 + EX28DRAFT_1141 0.75 +0.1 1,158,835 + EX28DRAFT_1141 0.75 +0.6 1,158,878 + EX28DRAFT_1141 0.78 +0.7 1,158,923 + EX28DRAFT_1141 0.81 -0.4 1,158,924 - EX28DRAFT_1141 0.81 -0.4 1,158,927 + EX28DRAFT_1141 0.81 +0.0 1,158,927 + EX28DRAFT_1141 0.81 -0.1 1,158,928 - EX28DRAFT_1141 0.81 -0.6 1,159,017 + EX28DRAFT_1141 0.87 +0.2 1,159,039 + EX28DRAFT_1141 0.88 +2.0 1,159,039 + EX28DRAFT_1141 0.88 +0.0 1,159,055 - EX28DRAFT_1141 0.89 -3.7 1,159,302 + -0.7 1,159,303 - -0.4 1,159,366 + EX28DRAFT_1142 0.11 +0.6 1,159,461 + EX28DRAFT_1142 0.18 +0.7 1,159,566 + EX28DRAFT_1142 0.26 -0.4 1,159,566 + EX28DRAFT_1142 0.26 -1.0 1,159,567 - EX28DRAFT_1142 0.26 +0.3 1,159,859 - EX28DRAFT_1142 0.48 +2.0 1,159,870 - EX28DRAFT_1142 0.49 -0.8 1,160,070 - EX28DRAFT_1142 0.64 +0.2 1,160,119 - EX28DRAFT_1142 0.67 +0.7 1,160,216 - EX28DRAFT_1142 0.75 -0.4
Or see this region's nucleotide sequence