Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0949 and EX28DRAFT_0950 are separated by 37 nucleotides EX28DRAFT_0950 and EX28DRAFT_0951 are separated by 164 nucleotides EX28DRAFT_0951 and EX28DRAFT_0952 are separated by 148 nucleotides EX28DRAFT_0952 and EX28DRAFT_0953 are separated by 6 nucleotides
EX28DRAFT_0949: EX28DRAFT_0949 - aconitate hydratase 1, at 948,141 to 950,816
_0949
EX28DRAFT_0950: EX28DRAFT_0950 - GTP cyclohydrolase II, at 950,854 to 951,444
_0950
EX28DRAFT_0951: EX28DRAFT_0951 - Membrane-associated phospholipid phosphatase, at 951,609 to 952,409
_0951
EX28DRAFT_0952: EX28DRAFT_0952 - Predicted membrane protein, at 952,558 to 952,866
_0952
EX28DRAFT_0953: EX28DRAFT_0953 - Predicted N-acetylglucosaminyl transferase, at 952,873 to 954,042
_0953
Position (kb) 951
952
953 Strain fitness (log2 ratio) -2
-1
0
1 at 950.621 kb on + strand at 950.763 kb on + strand at 950.763 kb on + strand at 950.764 kb on - strand at 950.764 kb on - strand at 950.785 kb on + strand at 950.786 kb on - strand at 950.790 kb on + strand at 950.791 kb on - strand at 950.849 kb on + strand at 950.850 kb on - strand at 950.853 kb on - strand at 951.553 kb on + strand at 951.553 kb on + strand at 951.553 kb on + strand at 951.553 kb on + strand at 951.553 kb on + strand at 951.554 kb on - strand at 951.554 kb on - strand at 951.554 kb on - strand at 951.554 kb on - strand at 951.555 kb on + strand at 951.555 kb on + strand at 951.555 kb on + strand at 951.556 kb on - strand at 951.582 kb on + strand at 951.609 kb on - strand at 951.609 kb on - strand at 951.692 kb on + strand, within EX28DRAFT_0951 at 951.692 kb on + strand, within EX28DRAFT_0951 at 951.746 kb on + strand, within EX28DRAFT_0951 at 951.747 kb on - strand, within EX28DRAFT_0951 at 951.747 kb on - strand, within EX28DRAFT_0951 at 951.755 kb on + strand, within EX28DRAFT_0951 at 951.803 kb on + strand, within EX28DRAFT_0951 at 951.881 kb on + strand, within EX28DRAFT_0951 at 952.013 kb on - strand, within EX28DRAFT_0951 at 952.067 kb on + strand, within EX28DRAFT_0951 at 952.130 kb on + strand, within EX28DRAFT_0951 at 952.418 kb on - strand at 952.435 kb on + strand at 952.494 kb on + strand at 952.494 kb on + strand at 952.554 kb on + strand at 952.647 kb on + strand, within EX28DRAFT_0952 at 952.700 kb on + strand, within EX28DRAFT_0952
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 950,621 + -0.2 950,763 + -0.7 950,763 + +0.2 950,764 - -0.0 950,764 - -0.1 950,785 + +0.1 950,786 - -0.3 950,790 + -0.4 950,791 - +0.6 950,849 + -0.8 950,850 - -0.3 950,853 - +0.1 951,553 + +1.4 951,553 + +0.4 951,553 + +0.1 951,553 + -0.0 951,553 + -0.6 951,554 - -0.1 951,554 - +0.4 951,554 - +0.2 951,554 - -0.4 951,555 + +0.6 951,555 + -1.5 951,555 + +0.1 951,556 - -0.1 951,582 + +0.9 951,609 - -1.8 951,609 - -0.1 951,692 + EX28DRAFT_0951 0.10 -0.3 951,692 + EX28DRAFT_0951 0.10 -0.0 951,746 + EX28DRAFT_0951 0.17 +0.2 951,747 - EX28DRAFT_0951 0.17 -0.3 951,747 - EX28DRAFT_0951 0.17 +1.0 951,755 + EX28DRAFT_0951 0.18 +1.0 951,803 + EX28DRAFT_0951 0.24 +0.3 951,881 + EX28DRAFT_0951 0.34 +0.1 952,013 - EX28DRAFT_0951 0.50 -0.1 952,067 + EX28DRAFT_0951 0.57 -0.1 952,130 + EX28DRAFT_0951 0.65 -0.3 952,418 - -0.5 952,435 + -0.2 952,494 + -0.2 952,494 + +0.1 952,554 + +0.4 952,647 + EX28DRAFT_0952 0.29 -0.7 952,700 + EX28DRAFT_0952 0.46 -0.1
Or see this region's nucleotide sequence