Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0947 and EX28DRAFT_0948 are separated by 38 nucleotides EX28DRAFT_0948 and EX28DRAFT_0949 are separated by 398 nucleotides EX28DRAFT_0949 and EX28DRAFT_0950 are separated by 37 nucleotides EX28DRAFT_0950 and EX28DRAFT_0951 are separated by 164 nucleotides
EX28DRAFT_0947: EX28DRAFT_0947 - hypothetical protein, at 947,441 to 947,569
_0947
EX28DRAFT_0948: EX28DRAFT_0948 - hypothetical protein, at 947,608 to 947,742
_0948
EX28DRAFT_0949: EX28DRAFT_0949 - aconitate hydratase 1, at 948,141 to 950,816
_0949
EX28DRAFT_0950: EX28DRAFT_0950 - GTP cyclohydrolase II, at 950,854 to 951,444
_0950
EX28DRAFT_0951: EX28DRAFT_0951 - Membrane-associated phospholipid phosphatase, at 951,609 to 952,409
_0951
Position (kb) 948
949
950
951 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 947.166 kb on - strand at 947.181 kb on + strand at 947.181 kb on + strand at 947.182 kb on - strand at 947.183 kb on + strand at 947.184 kb on - strand at 947.184 kb on - strand at 947.184 kb on - strand at 947.184 kb on - strand at 947.214 kb on - strand at 947.216 kb on - strand at 947.281 kb on - strand at 947.328 kb on - strand at 947.559 kb on - strand at 947.567 kb on + strand at 947.571 kb on + strand at 947.572 kb on - strand at 947.643 kb on + strand, within EX28DRAFT_0948 at 947.703 kb on + strand, within EX28DRAFT_0948 at 947.745 kb on + strand at 947.769 kb on + strand at 947.827 kb on - strand at 947.841 kb on - strand at 947.861 kb on + strand at 947.861 kb on + strand at 947.886 kb on + strand at 947.905 kb on + strand at 948.035 kb on - strand at 948.089 kb on + strand at 948.089 kb on + strand at 948.140 kb on + strand at 948.140 kb on + strand at 948.141 kb on - strand at 948.141 kb on - strand at 948.154 kb on + strand at 948.168 kb on - strand at 948.204 kb on + strand at 948.205 kb on - strand at 948.207 kb on + strand at 948.479 kb on + strand, within EX28DRAFT_0949 at 948.609 kb on + strand, within EX28DRAFT_0949 at 948.610 kb on - strand, within EX28DRAFT_0949 at 948.674 kb on + strand, within EX28DRAFT_0949 at 948.782 kb on + strand, within EX28DRAFT_0949 at 949.069 kb on - strand, within EX28DRAFT_0949 at 949.116 kb on + strand, within EX28DRAFT_0949 at 949.116 kb on + strand, within EX28DRAFT_0949 at 949.117 kb on - strand, within EX28DRAFT_0949 at 949.168 kb on - strand, within EX28DRAFT_0949 at 949.168 kb on - strand, within EX28DRAFT_0949 at 949.168 kb on - strand, within EX28DRAFT_0949 at 949.169 kb on + strand, within EX28DRAFT_0949 at 949.517 kb on - strand, within EX28DRAFT_0949 at 949.643 kb on + strand, within EX28DRAFT_0949 at 949.653 kb on - strand, within EX28DRAFT_0949 at 949.717 kb on + strand, within EX28DRAFT_0949 at 949.717 kb on + strand, within EX28DRAFT_0949 at 949.812 kb on + strand, within EX28DRAFT_0949 at 949.835 kb on + strand, within EX28DRAFT_0949 at 949.836 kb on - strand, within EX28DRAFT_0949 at 949.888 kb on - strand, within EX28DRAFT_0949 at 949.898 kb on + strand, within EX28DRAFT_0949 at 949.899 kb on - strand, within EX28DRAFT_0949 at 950.028 kb on - strand, within EX28DRAFT_0949 at 950.031 kb on + strand, within EX28DRAFT_0949 at 950.032 kb on - strand, within EX28DRAFT_0949 at 950.032 kb on - strand, within EX28DRAFT_0949 at 950.032 kb on - strand, within EX28DRAFT_0949 at 950.055 kb on + strand, within EX28DRAFT_0949 at 950.055 kb on + strand, within EX28DRAFT_0949 at 950.055 kb on + strand, within EX28DRAFT_0949 at 950.056 kb on - strand, within EX28DRAFT_0949 at 950.056 kb on - strand, within EX28DRAFT_0949 at 950.058 kb on - strand, within EX28DRAFT_0949 at 950.132 kb on - strand, within EX28DRAFT_0949 at 950.168 kb on + strand, within EX28DRAFT_0949 at 950.168 kb on + strand, within EX28DRAFT_0949 at 950.169 kb on - strand, within EX28DRAFT_0949 at 950.169 kb on - strand, within EX28DRAFT_0949 at 950.169 kb on - strand, within EX28DRAFT_0949 at 950.187 kb on - strand, within EX28DRAFT_0949 at 950.187 kb on - strand, within EX28DRAFT_0949 at 950.391 kb on + strand, within EX28DRAFT_0949 at 950.392 kb on - strand, within EX28DRAFT_0949 at 950.392 kb on - strand, within EX28DRAFT_0949 at 950.409 kb on + strand, within EX28DRAFT_0949 at 950.410 kb on - strand, within EX28DRAFT_0949 at 950.454 kb on + strand, within EX28DRAFT_0949 at 950.540 kb on + strand, within EX28DRAFT_0949 at 950.540 kb on + strand, within EX28DRAFT_0949 at 950.606 kb on + strand at 950.621 kb on + strand at 950.763 kb on + strand at 950.763 kb on + strand at 950.764 kb on - strand at 950.764 kb on - strand at 950.785 kb on + strand at 950.786 kb on - strand at 950.790 kb on + strand at 950.791 kb on - strand at 950.849 kb on + strand at 950.850 kb on - strand at 950.853 kb on - strand at 951.553 kb on + strand at 951.553 kb on + strand at 951.553 kb on + strand at 951.553 kb on + strand at 951.553 kb on + strand at 951.554 kb on - strand at 951.554 kb on - strand at 951.554 kb on - strand at 951.554 kb on - strand at 951.555 kb on + strand at 951.555 kb on + strand at 951.555 kb on + strand at 951.556 kb on - strand at 951.582 kb on + strand at 951.609 kb on - strand at 951.609 kb on - strand at 951.692 kb on + strand, within EX28DRAFT_0951 at 951.692 kb on + strand, within EX28DRAFT_0951 at 951.746 kb on + strand, within EX28DRAFT_0951 at 951.747 kb on - strand, within EX28DRAFT_0951 at 951.747 kb on - strand, within EX28DRAFT_0951 at 951.755 kb on + strand, within EX28DRAFT_0951 at 951.803 kb on + strand, within EX28DRAFT_0951
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 947,166 - +0.0 947,181 + +0.4 947,181 + -0.2 947,182 - +0.4 947,183 + -0.1 947,184 - +0.2 947,184 - +1.1 947,184 - -0.9 947,184 - +1.0 947,214 - +0.4 947,216 - +0.1 947,281 - -0.5 947,328 - +0.6 947,559 - +0.1 947,567 + -0.5 947,571 + -3.2 947,572 - -0.8 947,643 + EX28DRAFT_0948 0.26 -1.9 947,703 + EX28DRAFT_0948 0.70 -1.2 947,745 + -0.3 947,769 + +1.5 947,827 - -0.1 947,841 - +0.4 947,861 + -1.0 947,861 + -0.6 947,886 + -0.8 947,905 + -0.4 948,035 - -0.8 948,089 + -1.6 948,089 + -0.4 948,140 + -0.5 948,140 + -0.7 948,141 - +0.3 948,141 - -0.5 948,154 + +0.2 948,168 - +0.2 948,204 + -0.5 948,205 - +0.2 948,207 + -0.2 948,479 + EX28DRAFT_0949 0.13 +0.3 948,609 + EX28DRAFT_0949 0.17 -0.9 948,610 - EX28DRAFT_0949 0.18 -0.4 948,674 + EX28DRAFT_0949 0.20 -0.8 948,782 + EX28DRAFT_0949 0.24 -0.1 949,069 - EX28DRAFT_0949 0.35 -0.9 949,116 + EX28DRAFT_0949 0.36 -0.6 949,116 + EX28DRAFT_0949 0.36 -1.8 949,117 - EX28DRAFT_0949 0.36 -0.5 949,168 - EX28DRAFT_0949 0.38 -0.2 949,168 - EX28DRAFT_0949 0.38 +0.1 949,168 - EX28DRAFT_0949 0.38 -2.0 949,169 + EX28DRAFT_0949 0.38 -0.0 949,517 - EX28DRAFT_0949 0.51 -0.6 949,643 + EX28DRAFT_0949 0.56 -0.2 949,653 - EX28DRAFT_0949 0.57 +0.0 949,717 + EX28DRAFT_0949 0.59 +0.0 949,717 + EX28DRAFT_0949 0.59 +0.7 949,812 + EX28DRAFT_0949 0.62 -1.1 949,835 + EX28DRAFT_0949 0.63 -0.0 949,836 - EX28DRAFT_0949 0.63 -0.2 949,888 - EX28DRAFT_0949 0.65 -1.0 949,898 + EX28DRAFT_0949 0.66 -1.8 949,899 - EX28DRAFT_0949 0.66 +1.3 950,028 - EX28DRAFT_0949 0.71 +0.8 950,031 + EX28DRAFT_0949 0.71 +0.3 950,032 - EX28DRAFT_0949 0.71 +0.4 950,032 - EX28DRAFT_0949 0.71 +0.9 950,032 - EX28DRAFT_0949 0.71 +0.2 950,055 + EX28DRAFT_0949 0.72 -0.4 950,055 + EX28DRAFT_0949 0.72 +0.0 950,055 + EX28DRAFT_0949 0.72 -0.2 950,056 - EX28DRAFT_0949 0.72 +0.2 950,056 - EX28DRAFT_0949 0.72 +0.0 950,058 - EX28DRAFT_0949 0.72 -0.3 950,132 - EX28DRAFT_0949 0.74 -1.1 950,168 + EX28DRAFT_0949 0.76 +0.1 950,168 + EX28DRAFT_0949 0.76 -0.4 950,169 - EX28DRAFT_0949 0.76 -2.3 950,169 - EX28DRAFT_0949 0.76 +0.9 950,169 - EX28DRAFT_0949 0.76 -0.8 950,187 - EX28DRAFT_0949 0.76 +0.6 950,187 - EX28DRAFT_0949 0.76 +0.4 950,391 + EX28DRAFT_0949 0.84 +0.1 950,392 - EX28DRAFT_0949 0.84 +0.8 950,392 - EX28DRAFT_0949 0.84 +0.0 950,409 + EX28DRAFT_0949 0.85 -0.4 950,410 - EX28DRAFT_0949 0.85 -0.3 950,454 + EX28DRAFT_0949 0.86 -0.4 950,540 + EX28DRAFT_0949 0.90 -0.6 950,540 + EX28DRAFT_0949 0.90 -0.5 950,606 + -0.1 950,621 + -0.2 950,763 + -0.7 950,763 + +0.2 950,764 - -0.0 950,764 - -0.1 950,785 + +0.1 950,786 - -0.3 950,790 + -0.4 950,791 - +0.6 950,849 + -0.8 950,850 - -0.3 950,853 - +0.1 951,553 + +1.4 951,553 + +0.4 951,553 + +0.1 951,553 + -0.0 951,553 + -0.6 951,554 - -0.1 951,554 - +0.4 951,554 - +0.2 951,554 - -0.4 951,555 + +0.6 951,555 + -1.5 951,555 + +0.1 951,556 - -0.1 951,582 + +0.9 951,609 - -1.8 951,609 - -0.1 951,692 + EX28DRAFT_0951 0.10 -0.3 951,692 + EX28DRAFT_0951 0.10 -0.0 951,746 + EX28DRAFT_0951 0.17 +0.2 951,747 - EX28DRAFT_0951 0.17 -0.3 951,747 - EX28DRAFT_0951 0.17 +1.0 951,755 + EX28DRAFT_0951 0.18 +1.0 951,803 + EX28DRAFT_0951 0.24 +0.3
Or see this region's nucleotide sequence