Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0812 and EX28DRAFT_0813 are separated by 75 nucleotides EX28DRAFT_0813 and EX28DRAFT_0814 are separated by 3 nucleotides EX28DRAFT_0814 and EX28DRAFT_0815 overlap by 8 nucleotides EX28DRAFT_0815 and EX28DRAFT_0816 are separated by 71 nucleotides
EX28DRAFT_0812: EX28DRAFT_0812 - hypothetical protein, at 815,278 to 816,354
_0812
EX28DRAFT_0813: EX28DRAFT_0813 - Uncharacterized conserved protein, at 816,430 to 816,870
_0813
EX28DRAFT_0814: EX28DRAFT_0814 - RHS repeat-associated core domain, at 816,874 to 821,232
_0814
EX28DRAFT_0815: EX28DRAFT_0815 - Macro domain, at 821,225 to 821,977
_0815
EX28DRAFT_0816: EX28DRAFT_0816 - Anaphase-promoting complex, cyclosome, subunit 3, at 822,049 to 822,468
_0816
Position (kb) 816
817
818
819
820
821
822 Strain fitness (log2 ratio) -1
0
1
2
3 at 815.886 kb on + strand, within EX28DRAFT_0812 at 815.886 kb on + strand, within EX28DRAFT_0812 at 815.911 kb on - strand, within EX28DRAFT_0812 at 815.964 kb on - strand, within EX28DRAFT_0812 at 815.964 kb on - strand, within EX28DRAFT_0812 at 815.990 kb on + strand, within EX28DRAFT_0812 at 815.994 kb on + strand, within EX28DRAFT_0812 at 816.037 kb on - strand, within EX28DRAFT_0812 at 816.037 kb on - strand, within EX28DRAFT_0812 at 816.037 kb on - strand, within EX28DRAFT_0812 at 816.042 kb on - strand, within EX28DRAFT_0812 at 816.042 kb on - strand, within EX28DRAFT_0812 at 816.187 kb on - strand, within EX28DRAFT_0812 at 816.187 kb on - strand, within EX28DRAFT_0812 at 816.247 kb on + strand at 816.271 kb on - strand at 816.281 kb on - strand at 816.323 kb on + strand at 816.352 kb on + strand at 816.356 kb on - strand at 816.407 kb on + strand at 816.410 kb on + strand at 816.429 kb on + strand at 816.437 kb on - strand at 816.501 kb on + strand, within EX28DRAFT_0813 at 816.502 kb on - strand, within EX28DRAFT_0813 at 816.647 kb on + strand, within EX28DRAFT_0813 at 816.832 kb on - strand at 816.868 kb on + strand at 816.868 kb on + strand at 817.151 kb on + strand at 817.912 kb on + strand, within EX28DRAFT_0814 at 817.912 kb on + strand, within EX28DRAFT_0814 at 817.913 kb on - strand, within EX28DRAFT_0814 at 817.913 kb on - strand, within EX28DRAFT_0814 at 817.913 kb on - strand, within EX28DRAFT_0814 at 817.913 kb on - strand, within EX28DRAFT_0814 at 817.939 kb on - strand, within EX28DRAFT_0814 at 818.002 kb on + strand, within EX28DRAFT_0814 at 818.002 kb on + strand, within EX28DRAFT_0814 at 818.089 kb on + strand, within EX28DRAFT_0814 at 818.089 kb on + strand, within EX28DRAFT_0814 at 818.089 kb on + strand, within EX28DRAFT_0814 at 818.091 kb on + strand, within EX28DRAFT_0814 at 818.092 kb on - strand, within EX28DRAFT_0814 at 818.220 kb on - strand, within EX28DRAFT_0814 at 818.386 kb on + strand, within EX28DRAFT_0814 at 818.387 kb on - strand, within EX28DRAFT_0814 at 818.518 kb on + strand, within EX28DRAFT_0814 at 818.708 kb on - strand, within EX28DRAFT_0814 at 818.962 kb on + strand, within EX28DRAFT_0814 at 818.963 kb on - strand, within EX28DRAFT_0814 at 819.009 kb on + strand, within EX28DRAFT_0814 at 819.214 kb on + strand, within EX28DRAFT_0814 at 819.215 kb on - strand, within EX28DRAFT_0814 at 819.250 kb on - strand, within EX28DRAFT_0814 at 819.538 kb on + strand, within EX28DRAFT_0814 at 819.539 kb on - strand, within EX28DRAFT_0814 at 819.572 kb on + strand, within EX28DRAFT_0814 at 819.573 kb on - strand, within EX28DRAFT_0814 at 819.634 kb on + strand, within EX28DRAFT_0814 at 819.635 kb on - strand, within EX28DRAFT_0814 at 819.760 kb on + strand, within EX28DRAFT_0814 at 819.970 kb on + strand, within EX28DRAFT_0814 at 820.249 kb on + strand, within EX28DRAFT_0814 at 820.320 kb on - strand, within EX28DRAFT_0814 at 820.471 kb on + strand, within EX28DRAFT_0814 at 820.472 kb on - strand, within EX28DRAFT_0814 at 820.472 kb on - strand, within EX28DRAFT_0814 at 820.495 kb on + strand, within EX28DRAFT_0814 at 820.495 kb on + strand, within EX28DRAFT_0814 at 820.661 kb on + strand, within EX28DRAFT_0814 at 820.726 kb on + strand, within EX28DRAFT_0814 at 820.726 kb on + strand, within EX28DRAFT_0814 at 820.727 kb on - strand, within EX28DRAFT_0814 at 820.744 kb on + strand, within EX28DRAFT_0814 at 820.745 kb on - strand, within EX28DRAFT_0814 at 820.881 kb on + strand at 820.927 kb on - strand at 820.946 kb on + strand at 820.946 kb on + strand at 820.946 kb on + strand at 820.946 kb on + strand at 820.947 kb on - strand at 820.947 kb on - strand at 820.947 kb on - strand at 820.947 kb on - strand at 820.972 kb on + strand at 821.070 kb on - strand at 821.071 kb on + strand at 821.072 kb on - strand at 822.219 kb on + strand, within EX28DRAFT_0816
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 815,886 + EX28DRAFT_0812 0.56 +0.6 815,886 + EX28DRAFT_0812 0.56 -0.2 815,911 - EX28DRAFT_0812 0.59 -0.7 815,964 - EX28DRAFT_0812 0.64 +0.3 815,964 - EX28DRAFT_0812 0.64 -0.0 815,990 + EX28DRAFT_0812 0.66 -0.0 815,994 + EX28DRAFT_0812 0.66 -0.4 816,037 - EX28DRAFT_0812 0.70 -0.1 816,037 - EX28DRAFT_0812 0.70 -0.9 816,037 - EX28DRAFT_0812 0.70 -0.0 816,042 - EX28DRAFT_0812 0.71 +1.2 816,042 - EX28DRAFT_0812 0.71 +0.1 816,187 - EX28DRAFT_0812 0.84 -0.4 816,187 - EX28DRAFT_0812 0.84 +0.8 816,247 + -0.1 816,271 - +0.1 816,281 - -0.9 816,323 + -0.9 816,352 + +1.0 816,356 - -1.0 816,407 + +0.1 816,410 + -0.8 816,429 + +0.5 816,437 - +3.2 816,501 + EX28DRAFT_0813 0.16 +0.3 816,502 - EX28DRAFT_0813 0.16 +0.0 816,647 + EX28DRAFT_0813 0.49 -0.6 816,832 - +0.8 816,868 + -0.4 816,868 + +0.3 817,151 + +0.1 817,912 + EX28DRAFT_0814 0.24 +0.6 817,912 + EX28DRAFT_0814 0.24 +0.4 817,913 - EX28DRAFT_0814 0.24 +0.2 817,913 - EX28DRAFT_0814 0.24 +0.2 817,913 - EX28DRAFT_0814 0.24 -0.6 817,913 - EX28DRAFT_0814 0.24 +0.6 817,939 - EX28DRAFT_0814 0.24 +0.5 818,002 + EX28DRAFT_0814 0.26 +0.5 818,002 + EX28DRAFT_0814 0.26 -0.4 818,089 + EX28DRAFT_0814 0.28 +0.0 818,089 + EX28DRAFT_0814 0.28 +0.1 818,089 + EX28DRAFT_0814 0.28 +0.5 818,091 + EX28DRAFT_0814 0.28 +0.4 818,092 - EX28DRAFT_0814 0.28 +0.2 818,220 - EX28DRAFT_0814 0.31 +0.3 818,386 + EX28DRAFT_0814 0.35 -0.3 818,387 - EX28DRAFT_0814 0.35 +0.9 818,518 + EX28DRAFT_0814 0.38 +3.3 818,708 - EX28DRAFT_0814 0.42 +1.0 818,962 + EX28DRAFT_0814 0.48 -0.4 818,963 - EX28DRAFT_0814 0.48 +0.2 819,009 + EX28DRAFT_0814 0.49 -0.8 819,214 + EX28DRAFT_0814 0.54 +0.8 819,215 - EX28DRAFT_0814 0.54 +0.3 819,250 - EX28DRAFT_0814 0.55 -0.2 819,538 + EX28DRAFT_0814 0.61 +0.1 819,539 - EX28DRAFT_0814 0.61 -0.5 819,572 + EX28DRAFT_0814 0.62 -0.3 819,573 - EX28DRAFT_0814 0.62 -0.1 819,634 + EX28DRAFT_0814 0.63 -0.2 819,635 - EX28DRAFT_0814 0.63 +0.2 819,760 + EX28DRAFT_0814 0.66 -1.5 819,970 + EX28DRAFT_0814 0.71 -0.3 820,249 + EX28DRAFT_0814 0.77 +0.1 820,320 - EX28DRAFT_0814 0.79 +0.7 820,471 + EX28DRAFT_0814 0.83 +0.8 820,472 - EX28DRAFT_0814 0.83 +0.3 820,472 - EX28DRAFT_0814 0.83 +0.2 820,495 + EX28DRAFT_0814 0.83 -0.5 820,495 + EX28DRAFT_0814 0.83 +0.3 820,661 + EX28DRAFT_0814 0.87 +0.3 820,726 + EX28DRAFT_0814 0.88 +0.4 820,726 + EX28DRAFT_0814 0.88 +0.2 820,727 - EX28DRAFT_0814 0.88 -0.0 820,744 + EX28DRAFT_0814 0.89 +0.8 820,745 - EX28DRAFT_0814 0.89 +0.3 820,881 + +0.6 820,927 - -1.5 820,946 + +0.3 820,946 + +0.0 820,946 + -1.2 820,946 + -1.1 820,947 - +0.2 820,947 - +1.6 820,947 - -0.1 820,947 - -0.4 820,972 + +0.4 821,070 - +0.8 821,071 + -0.8 821,072 - +0.2 822,219 + EX28DRAFT_0816 0.40 -0.4
Or see this region's nucleotide sequence