Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0751 and EX28DRAFT_0752 are separated by 37 nucleotides EX28DRAFT_0752 and EX28DRAFT_0753 are separated by 170 nucleotides EX28DRAFT_0753 and EX28DRAFT_0754 overlap by 42 nucleotides EX28DRAFT_0754 and EX28DRAFT_0755 are separated by 26 nucleotides
EX28DRAFT_0751: EX28DRAFT_0751 - tRNA threonylcarbamoyl adenosine modification protein YeaZ, at 749,478 to 750,173
_0751
EX28DRAFT_0752: EX28DRAFT_0752 - outer membrane lipoprotein, Slp family, at 750,211 to 750,792
_0752
EX28DRAFT_0753: EX28DRAFT_0753 - Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II, at 750,963 to 752,681
_0753
EX28DRAFT_0754: EX28DRAFT_0754 - RNA, at 752,640 to 752,726
_0754
EX28DRAFT_0755: EX28DRAFT_0755 - ribonuclease D, at 752,753 to 753,880
_0755
Position (kb) 750
751
752
753 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 750.230 kb on + strand at 750.230 kb on + strand at 750.230 kb on + strand at 750.231 kb on - strand at 750.231 kb on - strand at 750.231 kb on - strand at 750.231 kb on - strand at 750.234 kb on - strand at 750.300 kb on + strand, within EX28DRAFT_0752 at 750.498 kb on + strand, within EX28DRAFT_0752 at 750.498 kb on + strand, within EX28DRAFT_0752 at 750.502 kb on + strand, within EX28DRAFT_0752 at 750.640 kb on + strand, within EX28DRAFT_0752 at 750.748 kb on + strand at 750.749 kb on - strand at 750.796 kb on - strand at 750.904 kb on - strand at 751.167 kb on - strand, within EX28DRAFT_0753 at 751.276 kb on + strand, within EX28DRAFT_0753 at 751.276 kb on + strand, within EX28DRAFT_0753 at 751.317 kb on + strand, within EX28DRAFT_0753 at 751.318 kb on - strand, within EX28DRAFT_0753 at 751.318 kb on - strand, within EX28DRAFT_0753 at 751.503 kb on + strand, within EX28DRAFT_0753 at 751.503 kb on + strand, within EX28DRAFT_0753 at 751.504 kb on - strand, within EX28DRAFT_0753 at 751.528 kb on - strand, within EX28DRAFT_0753 at 751.528 kb on - strand, within EX28DRAFT_0753 at 751.580 kb on + strand, within EX28DRAFT_0753 at 751.587 kb on + strand, within EX28DRAFT_0753 at 751.588 kb on - strand, within EX28DRAFT_0753 at 751.633 kb on - strand, within EX28DRAFT_0753 at 751.686 kb on - strand, within EX28DRAFT_0753 at 751.720 kb on - strand, within EX28DRAFT_0753 at 751.772 kb on - strand, within EX28DRAFT_0753 at 751.772 kb on - strand, within EX28DRAFT_0753 at 751.772 kb on - strand, within EX28DRAFT_0753 at 751.811 kb on + strand, within EX28DRAFT_0753 at 751.812 kb on - strand, within EX28DRAFT_0753 at 752.050 kb on - strand, within EX28DRAFT_0753 at 752.050 kb on - strand, within EX28DRAFT_0753 at 752.247 kb on + strand, within EX28DRAFT_0753 at 752.418 kb on - strand, within EX28DRAFT_0753 at 752.491 kb on + strand, within EX28DRAFT_0753 at 752.492 kb on - strand, within EX28DRAFT_0753 at 752.492 kb on - strand, within EX28DRAFT_0753 at 752.492 kb on - strand, within EX28DRAFT_0753 at 752.492 kb on - strand, within EX28DRAFT_0753 at 752.641 kb on + strand at 752.642 kb on - strand at 752.665 kb on + strand at 752.672 kb on + strand at 752.673 kb on - strand at 752.865 kb on - strand at 752.892 kb on - strand, within EX28DRAFT_0755 at 752.899 kb on + strand, within EX28DRAFT_0755 at 752.985 kb on - strand, within EX28DRAFT_0755 at 753.126 kb on - strand, within EX28DRAFT_0755 at 753.127 kb on + strand, within EX28DRAFT_0755 at 753.204 kb on - strand, within EX28DRAFT_0755 at 753.224 kb on + strand, within EX28DRAFT_0755 at 753.383 kb on - strand, within EX28DRAFT_0755 at 753.501 kb on - strand, within EX28DRAFT_0755 at 753.502 kb on + strand, within EX28DRAFT_0755
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 750,230 + -0.5 750,230 + +0.6 750,230 + -2.3 750,231 - -1.2 750,231 - -0.9 750,231 - -0.3 750,231 - -0.3 750,234 - -0.1 750,300 + EX28DRAFT_0752 0.15 -1.5 750,498 + EX28DRAFT_0752 0.49 +1.6 750,498 + EX28DRAFT_0752 0.49 +0.2 750,502 + EX28DRAFT_0752 0.50 +0.5 750,640 + EX28DRAFT_0752 0.74 +0.1 750,748 + -0.8 750,749 - -0.6 750,796 - -0.1 750,904 - -0.7 751,167 - EX28DRAFT_0753 0.12 -1.7 751,276 + EX28DRAFT_0753 0.18 -0.4 751,276 + EX28DRAFT_0753 0.18 +0.3 751,317 + EX28DRAFT_0753 0.21 -0.9 751,318 - EX28DRAFT_0753 0.21 +0.4 751,318 - EX28DRAFT_0753 0.21 +0.0 751,503 + EX28DRAFT_0753 0.31 -0.7 751,503 + EX28DRAFT_0753 0.31 -0.8 751,504 - EX28DRAFT_0753 0.31 -0.5 751,528 - EX28DRAFT_0753 0.33 -0.1 751,528 - EX28DRAFT_0753 0.33 -0.9 751,580 + EX28DRAFT_0753 0.36 -0.2 751,587 + EX28DRAFT_0753 0.36 -0.6 751,588 - EX28DRAFT_0753 0.36 -0.2 751,633 - EX28DRAFT_0753 0.39 -2.1 751,686 - EX28DRAFT_0753 0.42 -1.3 751,720 - EX28DRAFT_0753 0.44 -2.4 751,772 - EX28DRAFT_0753 0.47 -0.9 751,772 - EX28DRAFT_0753 0.47 -0.1 751,772 - EX28DRAFT_0753 0.47 -1.5 751,811 + EX28DRAFT_0753 0.49 -0.0 751,812 - EX28DRAFT_0753 0.49 -0.7 752,050 - EX28DRAFT_0753 0.63 -0.8 752,050 - EX28DRAFT_0753 0.63 -0.0 752,247 + EX28DRAFT_0753 0.75 +0.1 752,418 - EX28DRAFT_0753 0.85 -1.3 752,491 + EX28DRAFT_0753 0.89 -0.3 752,492 - EX28DRAFT_0753 0.89 -0.3 752,492 - EX28DRAFT_0753 0.89 -1.3 752,492 - EX28DRAFT_0753 0.89 +0.7 752,492 - EX28DRAFT_0753 0.89 -0.6 752,641 + -0.9 752,642 - -0.0 752,665 + -0.5 752,672 + -0.7 752,673 - -0.6 752,865 - +1.5 752,892 - EX28DRAFT_0755 0.12 -0.9 752,899 + EX28DRAFT_0755 0.13 -0.1 752,985 - EX28DRAFT_0755 0.21 -1.2 753,126 - EX28DRAFT_0755 0.33 -3.1 753,127 + EX28DRAFT_0755 0.33 -0.1 753,204 - EX28DRAFT_0755 0.40 +0.3 753,224 + EX28DRAFT_0755 0.42 -1.1 753,383 - EX28DRAFT_0755 0.56 +0.1 753,501 - EX28DRAFT_0755 0.66 -0.8 753,502 + EX28DRAFT_0755 0.66 -0.6
Or see this region's nucleotide sequence