Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0733 and EX28DRAFT_0734 are separated by 506 nucleotides EX28DRAFT_0734 and EX28DRAFT_0735 overlap by 286 nucleotides EX28DRAFT_0735 and EX28DRAFT_0736 are separated by 219 nucleotides
EX28DRAFT_0733: EX28DRAFT_0733 - Predicted Zn-dependent hydrolases of the beta-lactamase fold, at 730,693 to 731,682
_0733
EX28DRAFT_0734: EX28DRAFT_0734 - RNA, at 732,189 to 732,651
_0734
EX28DRAFT_0735: EX28DRAFT_0735 - Cold shock proteins, at 732,366 to 732,575
_0735
EX28DRAFT_0736: EX28DRAFT_0736 - Cell division protein FtsI/penicillin-binding protein 2, at 732,795 to 734,513
_0736
Position (kb) 732
733 Strain fitness (log2 ratio) -2
-1
0
1
2 at 731.238 kb on + strand, within EX28DRAFT_0733 at 731.238 kb on + strand, within EX28DRAFT_0733 at 731.267 kb on + strand, within EX28DRAFT_0733 at 731.381 kb on - strand, within EX28DRAFT_0733 at 731.422 kb on - strand, within EX28DRAFT_0733 at 731.444 kb on + strand, within EX28DRAFT_0733 at 731.453 kb on - strand, within EX28DRAFT_0733 at 731.484 kb on + strand, within EX28DRAFT_0733 at 731.668 kb on + strand at 731.697 kb on + strand at 731.704 kb on + strand at 731.706 kb on + strand at 731.706 kb on + strand at 731.992 kb on - strand at 732.078 kb on + strand at 732.079 kb on - strand at 732.161 kb on + strand at 732.161 kb on + strand at 732.208 kb on - strand at 732.280 kb on + strand, within EX28DRAFT_0734 at 732.282 kb on + strand, within EX28DRAFT_0734 at 732.282 kb on + strand, within EX28DRAFT_0734 at 732.282 kb on + strand, within EX28DRAFT_0734 at 732.282 kb on + strand, within EX28DRAFT_0734 at 732.282 kb on + strand, within EX28DRAFT_0734 at 732.286 kb on - strand, within EX28DRAFT_0734 at 732.300 kb on + strand, within EX28DRAFT_0734 at 732.377 kb on + strand at 732.389 kb on + strand at 732.457 kb on + strand at 732.569 kb on + strand at 732.602 kb on - strand at 732.621 kb on + strand at 732.659 kb on - strand at 732.670 kb on + strand at 732.692 kb on - strand at 732.695 kb on - strand at 732.860 kb on - strand at 732.864 kb on - strand at 732.947 kb on + strand at 732.948 kb on - strand at 732.994 kb on + strand, within EX28DRAFT_0736 at 732.995 kb on - strand, within EX28DRAFT_0736 at 733.058 kb on + strand, within EX28DRAFT_0736 at 733.186 kb on - strand, within EX28DRAFT_0736 at 733.463 kb on + strand, within EX28DRAFT_0736 at 733.464 kb on - strand, within EX28DRAFT_0736 at 733.464 kb on - strand, within EX28DRAFT_0736 at 733.474 kb on + strand, within EX28DRAFT_0736 at 733.474 kb on + strand, within EX28DRAFT_0736 at 733.474 kb on + strand, within EX28DRAFT_0736 at 733.475 kb on - strand, within EX28DRAFT_0736 at 733.475 kb on - strand, within EX28DRAFT_0736 at 733.569 kb on - strand, within EX28DRAFT_0736 at 733.588 kb on + strand, within EX28DRAFT_0736 at 733.588 kb on + strand, within EX28DRAFT_0736
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 731,238 + EX28DRAFT_0733 0.55 -1.1 731,238 + EX28DRAFT_0733 0.55 -0.9 731,267 + EX28DRAFT_0733 0.58 -1.5 731,381 - EX28DRAFT_0733 0.69 +0.2 731,422 - EX28DRAFT_0733 0.74 -0.2 731,444 + EX28DRAFT_0733 0.76 -0.2 731,453 - EX28DRAFT_0733 0.77 -0.6 731,484 + EX28DRAFT_0733 0.80 -0.4 731,668 + -0.5 731,697 + -1.5 731,704 + -1.9 731,706 + -1.6 731,706 + -0.7 731,992 - -2.5 732,078 + -0.5 732,079 - -2.1 732,161 + +1.1 732,161 + +1.2 732,208 - +0.8 732,280 + EX28DRAFT_0734 0.20 +1.5 732,282 + EX28DRAFT_0734 0.20 +1.3 732,282 + EX28DRAFT_0734 0.20 +1.4 732,282 + EX28DRAFT_0734 0.20 +0.8 732,282 + EX28DRAFT_0734 0.20 +1.4 732,282 + EX28DRAFT_0734 0.20 +1.6 732,286 - EX28DRAFT_0734 0.21 +1.8 732,300 + EX28DRAFT_0734 0.24 +1.6 732,377 + +1.6 732,389 + +2.0 732,457 + +1.5 732,569 + +0.6 732,602 - +1.0 732,621 + -1.0 732,659 - +0.3 732,670 + +0.3 732,692 - -0.1 732,695 - -0.1 732,860 - -0.7 732,864 - +0.4 732,947 + -0.1 732,948 - -0.0 732,994 + EX28DRAFT_0736 0.12 -0.5 732,995 - EX28DRAFT_0736 0.12 -0.0 733,058 + EX28DRAFT_0736 0.15 -0.3 733,186 - EX28DRAFT_0736 0.23 +0.1 733,463 + EX28DRAFT_0736 0.39 -0.7 733,464 - EX28DRAFT_0736 0.39 -1.1 733,464 - EX28DRAFT_0736 0.39 +0.5 733,474 + EX28DRAFT_0736 0.39 -0.7 733,474 + EX28DRAFT_0736 0.39 -0.9 733,474 + EX28DRAFT_0736 0.39 +0.2 733,475 - EX28DRAFT_0736 0.40 -0.3 733,475 - EX28DRAFT_0736 0.40 +0.1 733,569 - EX28DRAFT_0736 0.45 -0.1 733,588 + EX28DRAFT_0736 0.46 -0.5 733,588 + EX28DRAFT_0736 0.46 -0.2
Or see this region's nucleotide sequence