Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0635 and EX28DRAFT_0636 are separated by 152 nucleotides EX28DRAFT_0636 and EX28DRAFT_0637 are separated by 46 nucleotides EX28DRAFT_0637 and EX28DRAFT_0638 are separated by 11 nucleotides EX28DRAFT_0638 and EX28DRAFT_0639 are separated by 82 nucleotides EX28DRAFT_0639 and EX28DRAFT_0640 overlap by 4 nucleotides EX28DRAFT_0640 and EX28DRAFT_0641 overlap by 4 nucleotides
EX28DRAFT_0635: EX28DRAFT_0635 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, at 631,946 to 632,494
_0635
EX28DRAFT_0636: EX28DRAFT_0636 - tRNA, at 632,647 to 632,722
_0636
EX28DRAFT_0637: EX28DRAFT_0637 - tRNA, at 632,769 to 632,842
_0637
EX28DRAFT_0638: EX28DRAFT_0638 - tRNA, at 632,854 to 632,940
_0638
EX28DRAFT_0639: EX28DRAFT_0639 - ABC-type branched-chain amino acid transport systems, ATPase component, at 633,023 to 633,739
_0639
EX28DRAFT_0640: EX28DRAFT_0640 - ABC-type branched-chain amino acid transport systems, ATPase component, at 633,736 to 634,611
_0640
EX28DRAFT_0641: EX28DRAFT_0641 - ABC-type branched-chain amino acid transport system, permease component, at 634,608 to 635,885
_0641
Position (kb) 633
634 Strain fitness (log2 ratio) -1
0
1 at 632.967 kb on + strand at 632.967 kb on + strand at 633.118 kb on - strand, within EX28DRAFT_0639 at 633.118 kb on - strand, within EX28DRAFT_0639 at 633.118 kb on - strand, within EX28DRAFT_0639 at 633.514 kb on - strand, within EX28DRAFT_0639 at 633.514 kb on - strand, within EX28DRAFT_0639 at 633.514 kb on - strand, within EX28DRAFT_0639 at 633.514 kb on - strand, within EX28DRAFT_0639 at 633.526 kb on + strand, within EX28DRAFT_0639 at 633.535 kb on + strand, within EX28DRAFT_0639 at 633.740 kb on - strand at 633.826 kb on - strand, within EX28DRAFT_0640 at 633.899 kb on - strand, within EX28DRAFT_0640 at 633.902 kb on - strand, within EX28DRAFT_0640 at 633.936 kb on + strand, within EX28DRAFT_0640 at 633.952 kb on - strand, within EX28DRAFT_0640 at 634.164 kb on + strand, within EX28DRAFT_0640 at 634.203 kb on + strand, within EX28DRAFT_0640 at 634.203 kb on + strand, within EX28DRAFT_0640 at 634.204 kb on - strand, within EX28DRAFT_0640 at 634.351 kb on - strand, within EX28DRAFT_0640 at 634.419 kb on + strand, within EX28DRAFT_0640 at 634.420 kb on - strand, within EX28DRAFT_0640 at 634.424 kb on - strand, within EX28DRAFT_0640 at 634.424 kb on - strand, within EX28DRAFT_0640 at 634.448 kb on + strand, within EX28DRAFT_0640 at 634.449 kb on - strand, within EX28DRAFT_0640 at 634.468 kb on - strand, within EX28DRAFT_0640 at 634.528 kb on + strand at 634.558 kb on - strand at 634.594 kb on + strand at 634.595 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 632,967 + +0.5 632,967 + -0.1 633,118 - EX28DRAFT_0639 0.13 +0.7 633,118 - EX28DRAFT_0639 0.13 -1.6 633,118 - EX28DRAFT_0639 0.13 -0.1 633,514 - EX28DRAFT_0639 0.68 +0.9 633,514 - EX28DRAFT_0639 0.68 +0.4 633,514 - EX28DRAFT_0639 0.68 -0.0 633,514 - EX28DRAFT_0639 0.68 +0.5 633,526 + EX28DRAFT_0639 0.70 -0.1 633,535 + EX28DRAFT_0639 0.71 -0.4 633,740 - -0.9 633,826 - EX28DRAFT_0640 0.10 -0.5 633,899 - EX28DRAFT_0640 0.19 +0.4 633,902 - EX28DRAFT_0640 0.19 +0.2 633,936 + EX28DRAFT_0640 0.23 +0.0 633,952 - EX28DRAFT_0640 0.25 -0.3 634,164 + EX28DRAFT_0640 0.49 +0.1 634,203 + EX28DRAFT_0640 0.53 +0.0 634,203 + EX28DRAFT_0640 0.53 +0.1 634,204 - EX28DRAFT_0640 0.53 +0.0 634,351 - EX28DRAFT_0640 0.70 -0.0 634,419 + EX28DRAFT_0640 0.78 +0.0 634,420 - EX28DRAFT_0640 0.78 +0.1 634,424 - EX28DRAFT_0640 0.79 +0.8 634,424 - EX28DRAFT_0640 0.79 +1.2 634,448 + EX28DRAFT_0640 0.81 +0.3 634,449 - EX28DRAFT_0640 0.81 -0.1 634,468 - EX28DRAFT_0640 0.84 +0.1 634,528 + +0.3 634,558 - -1.5 634,594 + -0.7 634,595 - +0.1
Or see this region's nucleotide sequence