Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0346 and EX28DRAFT_0347 are separated by 33 nucleotides EX28DRAFT_0347 and EX28DRAFT_0348 overlap by 4 nucleotides
EX28DRAFT_0346: EX28DRAFT_0346 - molybdenum cofactor synthesis domain/competence/damage-inducible protein CinA N-terminal domain, at 308,378 to 309,577
_0346
EX28DRAFT_0347: EX28DRAFT_0347 - glycerol-3-phosphate dehydrogenase, anaerobic, C subunit, at 309,611 to 310,801
_0347
EX28DRAFT_0348: EX28DRAFT_0348 - glycerol-3-phosphate dehydrogenase, anaerobic, B subunit, at 310,798 to 312,015
_0348
Position (kb) 309
310
311 Strain fitness (log2 ratio) -1
0
1
2 at 308.848 kb on + strand, within EX28DRAFT_0346 at 309.377 kb on + strand, within EX28DRAFT_0346 at 309.377 kb on + strand, within EX28DRAFT_0346 at 309.377 kb on + strand, within EX28DRAFT_0346 at 309.378 kb on - strand, within EX28DRAFT_0346 at 309.382 kb on + strand, within EX28DRAFT_0346 at 309.383 kb on - strand, within EX28DRAFT_0346 at 309.383 kb on - strand, within EX28DRAFT_0346 at 309.788 kb on - strand, within EX28DRAFT_0347 at 309.854 kb on + strand, within EX28DRAFT_0347 at 309.874 kb on + strand, within EX28DRAFT_0347 at 309.876 kb on + strand, within EX28DRAFT_0347 at 309.877 kb on - strand, within EX28DRAFT_0347 at 309.902 kb on - strand, within EX28DRAFT_0347 at 309.918 kb on + strand, within EX28DRAFT_0347 at 310.070 kb on - strand, within EX28DRAFT_0347 at 310.163 kb on - strand, within EX28DRAFT_0347 at 310.284 kb on + strand, within EX28DRAFT_0347 at 310.284 kb on + strand, within EX28DRAFT_0347 at 310.284 kb on + strand, within EX28DRAFT_0347 at 310.294 kb on - strand, within EX28DRAFT_0347 at 310.326 kb on + strand, within EX28DRAFT_0347 at 310.384 kb on - strand, within EX28DRAFT_0347 at 310.409 kb on + strand, within EX28DRAFT_0347 at 310.409 kb on + strand, within EX28DRAFT_0347 at 310.410 kb on - strand, within EX28DRAFT_0347 at 310.657 kb on - strand, within EX28DRAFT_0347 at 310.772 kb on - strand at 310.841 kb on + strand at 310.842 kb on - strand at 310.842 kb on - strand at 310.842 kb on - strand at 310.929 kb on + strand, within EX28DRAFT_0348 at 311.067 kb on + strand, within EX28DRAFT_0348 at 311.139 kb on + strand, within EX28DRAFT_0348 at 311.140 kb on - strand, within EX28DRAFT_0348 at 311.140 kb on - strand, within EX28DRAFT_0348 at 311.161 kb on - strand, within EX28DRAFT_0348 at 311.444 kb on + strand, within EX28DRAFT_0348 at 311.444 kb on + strand, within EX28DRAFT_0348 at 311.628 kb on + strand, within EX28DRAFT_0348 at 311.701 kb on + strand, within EX28DRAFT_0348
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 308,848 + EX28DRAFT_0346 0.39 -0.9 309,377 + EX28DRAFT_0346 0.83 +0.2 309,377 + EX28DRAFT_0346 0.83 +0.5 309,377 + EX28DRAFT_0346 0.83 +0.3 309,378 - EX28DRAFT_0346 0.83 -1.0 309,382 + EX28DRAFT_0346 0.84 +0.7 309,383 - EX28DRAFT_0346 0.84 +0.4 309,383 - EX28DRAFT_0346 0.84 +0.1 309,788 - EX28DRAFT_0347 0.15 +0.3 309,854 + EX28DRAFT_0347 0.20 -0.4 309,874 + EX28DRAFT_0347 0.22 +0.5 309,876 + EX28DRAFT_0347 0.22 +0.2 309,877 - EX28DRAFT_0347 0.22 +0.4 309,902 - EX28DRAFT_0347 0.24 +2.0 309,918 + EX28DRAFT_0347 0.26 +0.6 310,070 - EX28DRAFT_0347 0.39 +1.4 310,163 - EX28DRAFT_0347 0.46 -1.5 310,284 + EX28DRAFT_0347 0.57 -0.2 310,284 + EX28DRAFT_0347 0.57 +0.3 310,284 + EX28DRAFT_0347 0.57 +0.5 310,294 - EX28DRAFT_0347 0.57 -0.4 310,326 + EX28DRAFT_0347 0.60 -0.1 310,384 - EX28DRAFT_0347 0.65 -0.3 310,409 + EX28DRAFT_0347 0.67 +0.4 310,409 + EX28DRAFT_0347 0.67 +0.4 310,410 - EX28DRAFT_0347 0.67 +0.2 310,657 - EX28DRAFT_0347 0.88 -0.3 310,772 - +0.2 310,841 + -0.1 310,842 - +0.1 310,842 - -0.6 310,842 - +0.3 310,929 + EX28DRAFT_0348 0.11 +0.2 311,067 + EX28DRAFT_0348 0.22 +0.5 311,139 + EX28DRAFT_0348 0.28 +0.7 311,140 - EX28DRAFT_0348 0.28 +0.0 311,140 - EX28DRAFT_0348 0.28 -0.1 311,161 - EX28DRAFT_0348 0.30 -0.7 311,444 + EX28DRAFT_0348 0.53 -0.9 311,444 + EX28DRAFT_0348 0.53 +0.5 311,628 + EX28DRAFT_0348 0.68 -0.2 311,701 + EX28DRAFT_0348 0.74 +0.4
Or see this region's nucleotide sequence