Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0232 and EX28DRAFT_0233 are separated by 33 nucleotides EX28DRAFT_0233 and EX28DRAFT_0234 are separated by 127 nucleotides
EX28DRAFT_0232: EX28DRAFT_0232 - NRAMP (natural resistance-associated macrophage protein) metal ion transporters, at 183,248 to 184,486
_0232
EX28DRAFT_0233: EX28DRAFT_0233 - Protein of unknown function (DUF2502), at 184,520 to 184,876
_0233
EX28DRAFT_0234: EX28DRAFT_0234 - Predicted oxidoreductases (related to aryl-alcohol dehydrogenases), at 185,004 to 186,002
_0234
Position (kb) 184
185 Strain fitness (log2 ratio) -1
0
1 at 183.802 kb on + strand, within EX28DRAFT_0232 at 183.810 kb on + strand, within EX28DRAFT_0232 at 183.942 kb on - strand, within EX28DRAFT_0232 at 184.210 kb on + strand, within EX28DRAFT_0232 at 184.484 kb on + strand at 184.522 kb on - strand at 184.642 kb on + strand, within EX28DRAFT_0233 at 184.642 kb on + strand, within EX28DRAFT_0233 at 184.644 kb on + strand, within EX28DRAFT_0233 at 184.645 kb on - strand, within EX28DRAFT_0233 at 184.750 kb on - strand, within EX28DRAFT_0233 at 184.759 kb on - strand, within EX28DRAFT_0233 at 184.787 kb on + strand, within EX28DRAFT_0233 at 184.848 kb on - strand at 184.876 kb on + strand at 184.925 kb on + strand at 184.928 kb on + strand at 184.929 kb on - strand at 184.939 kb on - strand at 185.027 kb on + strand at 185.106 kb on - strand, within EX28DRAFT_0234 at 185.146 kb on - strand, within EX28DRAFT_0234 at 185.148 kb on + strand, within EX28DRAFT_0234 at 185.214 kb on + strand, within EX28DRAFT_0234 at 185.215 kb on - strand, within EX28DRAFT_0234 at 185.348 kb on + strand, within EX28DRAFT_0234 at 185.348 kb on + strand, within EX28DRAFT_0234 at 185.462 kb on + strand, within EX28DRAFT_0234 at 185.494 kb on + strand, within EX28DRAFT_0234 at 185.513 kb on - strand, within EX28DRAFT_0234 at 185.603 kb on + strand, within EX28DRAFT_0234 at 185.603 kb on + strand, within EX28DRAFT_0234 at 185.612 kb on - strand, within EX28DRAFT_0234 at 185.612 kb on - strand, within EX28DRAFT_0234 at 185.612 kb on - strand, within EX28DRAFT_0234 at 185.702 kb on + strand, within EX28DRAFT_0234 at 185.703 kb on - strand, within EX28DRAFT_0234 at 185.705 kb on - strand, within EX28DRAFT_0234 at 185.806 kb on + strand, within EX28DRAFT_0234 at 185.806 kb on + strand, within EX28DRAFT_0234 at 185.806 kb on + strand, within EX28DRAFT_0234 at 185.807 kb on - strand, within EX28DRAFT_0234
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 183,802 + EX28DRAFT_0232 0.45 -0.5 183,810 + EX28DRAFT_0232 0.45 +0.7 183,942 - EX28DRAFT_0232 0.56 -0.5 184,210 + EX28DRAFT_0232 0.78 -0.1 184,484 + +0.3 184,522 - -0.1 184,642 + EX28DRAFT_0233 0.34 +1.5 184,642 + EX28DRAFT_0233 0.34 +0.8 184,644 + EX28DRAFT_0233 0.35 +0.6 184,645 - EX28DRAFT_0233 0.35 +1.0 184,750 - EX28DRAFT_0233 0.64 +0.1 184,759 - EX28DRAFT_0233 0.67 -0.3 184,787 + EX28DRAFT_0233 0.75 -0.0 184,848 - -0.1 184,876 + -0.1 184,925 + -0.4 184,928 + -0.0 184,929 - +0.3 184,939 - -1.4 185,027 + +0.6 185,106 - EX28DRAFT_0234 0.10 -0.3 185,146 - EX28DRAFT_0234 0.14 -0.1 185,148 + EX28DRAFT_0234 0.14 -0.7 185,214 + EX28DRAFT_0234 0.21 +0.3 185,215 - EX28DRAFT_0234 0.21 +0.6 185,348 + EX28DRAFT_0234 0.34 -0.7 185,348 + EX28DRAFT_0234 0.34 -0.4 185,462 + EX28DRAFT_0234 0.46 +0.3 185,494 + EX28DRAFT_0234 0.49 -0.4 185,513 - EX28DRAFT_0234 0.51 +0.2 185,603 + EX28DRAFT_0234 0.60 +0.4 185,603 + EX28DRAFT_0234 0.60 -0.3 185,612 - EX28DRAFT_0234 0.61 -0.5 185,612 - EX28DRAFT_0234 0.61 +0.7 185,612 - EX28DRAFT_0234 0.61 +0.8 185,702 + EX28DRAFT_0234 0.70 -0.8 185,703 - EX28DRAFT_0234 0.70 +0.0 185,705 - EX28DRAFT_0234 0.70 +0.3 185,806 + EX28DRAFT_0234 0.80 -1.3 185,806 + EX28DRAFT_0234 0.80 +0.5 185,806 + EX28DRAFT_0234 0.80 -0.1 185,807 - EX28DRAFT_0234 0.80 +1.0
Or see this region's nucleotide sequence