Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03971

Experiment: PYE with CHIR-090 40 ug/mL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCCNA_02623 and CCNA_03971 are separated by 34 nucleotidesCCNA_03971 and CCNA_02624 are separated by 271 nucleotides CCNA_02623: CCNA_02623 - cell division protein FtsZ, at 2,771,579 to 2,773,105 _02623 CCNA_03971: CCNA_03971 - hypothetical protein, at 2,773,140 to 2,773,205 _03971 CCNA_02624: CCNA_02624 - cell division protein FtsA, at 2,773,477 to 2,774,802 _02624 Position (kb) 2773 2774Strain fitness (log2 ratio) -2 -1 0 1at 2773.146 kb on - strandat 2773.328 kb on - strandat 2773.328 kb on - strandat 2773.351 kb on + strandat 2773.383 kb on - strandat 2773.396 kb on + strandat 2773.447 kb on + strandat 2773.447 kb on + strandat 2773.447 kb on + strandat 2773.475 kb on + strandat 2773.483 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction PYE with CHIR-090 40 ug/mL
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2,773,146 - +0.1
2,773,328 - +0.0
2,773,328 - +0.2
2,773,351 + -0.2
2,773,383 - +0.3
2,773,396 + -0.2
2,773,447 + -0.1
2,773,447 + -1.9
2,773,447 + -0.8
2,773,475 + +1.7
2,773,483 - +0.8

Or see this region's nucleotide sequence