Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03752

Experiment: PYE with CHIR-090 40 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 40 ug/mL
3,920,700	+		CCNA_03750	0.74	+0.5
3,920,700	+		CCNA_03750	0.74	+0.0
3,920,708	-		CCNA_03750	0.75	-1.0
3,920,747	+		CCNA_03750	0.78	+0.0
3,920,747	+		CCNA_03750	0.78	+0.4
3,920,747	+		CCNA_03750	0.78	+0.5
3,920,755	-		CCNA_03750	0.78	-0.8
3,920,755	-		CCNA_03750	0.78	-0.0
3,920,777	+		CCNA_03750	0.80	+0.6
3,920,777	+		CCNA_03750	0.80	+0.6
3,920,785	-		CCNA_03750	0.81	-1.0
3,920,819	-		CCNA_03750	0.84	+0.0
3,920,891	+		CCNA_03750	0.90	+0.4
3,920,891	+		CCNA_03750	0.90	-0.7
3,920,894	-				+0.5
3,920,926	-				-0.1
3,920,941	-				+1.2
3,920,964	-				-0.4
3,920,965	-				-0.1
3,920,966	-				+0.4
3,920,989	+				-0.1
3,921,015	-				-0.2
3,921,021	-				+0.3
3,921,028	-				-0.0
3,921,074	+				-0.2
3,921,117	+		CCNA_03751	0.14	+0.4
3,921,130	+		CCNA_03751	0.17	-0.5
3,921,138	-		CCNA_03751	0.18	-0.1
3,921,150	+		CCNA_03751	0.20	-1.1
3,921,153	-		CCNA_03751	0.21	-0.4
3,921,153	-		CCNA_03751	0.21	+0.0
3,921,209	-		CCNA_03751	0.32	-0.5
3,921,227	-		CCNA_03751	0.35	-0.7
3,921,231	-		CCNA_03751	0.36	+0.4
3,921,237	-		CCNA_03751	0.37	+1.5
3,921,237	-		CCNA_03751	0.37	+0.0
3,921,276	+		CCNA_03751	0.45	-0.2
3,921,309	+		CCNA_03751	0.51	-0.5
3,921,324	-		CCNA_03751	0.54	-1.3
3,921,336	+		CCNA_03751	0.57	+0.4
3,921,344	-		CCNA_03751	0.58	-0.3
3,921,354	+		CCNA_03751	0.60	+0.1
3,921,366	+		CCNA_03751	0.63	+0.7
3,921,373	+		CCNA_03751	0.64	+0.3
3,921,373	+		CCNA_03751	0.64	-0.6
3,921,373	+		CCNA_03751	0.64	+0.5
3,921,373	+		CCNA_03751	0.64	-2.5
3,921,373	+		CCNA_03751	0.64	-0.2
3,921,373	+		CCNA_03751	0.64	-0.5
3,921,373	+		CCNA_03751	0.64	+0.5
3,921,373	+		CCNA_03751	0.64	+0.0
3,921,375	+		CCNA_03751	0.64	-0.9
3,921,381	-		CCNA_03751	0.65	+0.5
3,921,381	-		CCNA_03751	0.65	+0.4
3,921,381	-		CCNA_03751	0.65	+1.7
3,921,381	-		CCNA_03751	0.65	+0.5
3,921,381	-		CCNA_03751	0.65	+0.7
3,921,386	-		CCNA_03751	0.66	+0.4
3,921,403	-		CCNA_03751	0.70	+1.6
3,921,406	-		CCNA_03751	0.70	-0.5
3,921,414	-		CCNA_03751	0.72	+0.4
3,921,430	+		CCNA_03751	0.75	-0.8
3,921,462	-		CCNA_03751	0.81	+0.5
3,921,462	-		CCNA_03751	0.81	+0.6
3,921,574	+				-0.2
3,921,574	+				+0.5
3,921,582	-				+0.8
3,921,584	+				+0.0
3,921,592	-				-0.0
3,921,614	+				-0.0
3,921,614	+				+0.6
3,921,615	+				-0.2
3,921,615	+				+0.1
3,921,647	-				-0.6
3,921,650	+				-0.0
3,921,685	-				-0.2
3,922,558	+				+0.3
3,922,576	+				+0.0
3,922,577	+				+0.1
3,922,577	+				+0.3
3,922,585	-				+0.3
3,922,585	-				+0.1
3,922,621	+				+1.5
3,922,629	-				+0.8
3,922,669	-				+1.2
3,922,671	-				-0.3
3,922,723	+		CCNA_03753	0.13	-0.9
3,922,723	+		CCNA_03753	0.13	-0.0
3,922,837	+		CCNA_03753	0.23	+0.4
3,922,845	-		CCNA_03753	0.24	-0.5
3,922,845	-		CCNA_03753	0.24	-0.3
3,922,878	-		CCNA_03753	0.26	-1.0
3,922,938	+		CCNA_03753	0.32	-0.2
3,922,958	+		CCNA_03753	0.34	+0.5
3,922,999	+		CCNA_03753	0.37	-0.5
3,923,126	-		CCNA_03753	0.48	-0.0
3,923,145	+		CCNA_03753	0.50	-0.9
3,923,145	+		CCNA_03753	0.50	-0.3
3,923,145	+		CCNA_03753	0.50	-1.0
3,923,145	+		CCNA_03753	0.50	-0.5
3,923,145	+		CCNA_03753	0.50	-0.4
3,923,145	+		CCNA_03753	0.50	+0.5
3,923,146	+		CCNA_03753	0.50	-1.0
3,923,153	-		CCNA_03753	0.51	+0.2
3,923,153	-		CCNA_03753	0.51	-0.7
3,923,153	-		CCNA_03753	0.51	-0.5
3,923,153	-		CCNA_03753	0.51	+0.3
3,923,153	-		CCNA_03753	0.51	-1.0
3,923,153	-		CCNA_03753	0.51	+0.1
3,923,155	+		CCNA_03753	0.51	-0.8
3,923,155	+		CCNA_03753	0.51	-2.2
3,923,163	-		CCNA_03753	0.52	-1.1
3,923,183	+		CCNA_03753	0.53	-0.2
3,923,186	-		CCNA_03753	0.54	-1.6
3,923,192	-		CCNA_03753	0.54	-0.0
3,923,227	+		CCNA_03753	0.57	-0.5
3,923,235	-		CCNA_03753	0.58	-0.4
3,923,254	-		CCNA_03753	0.60	-0.2
3,923,286	+		CCNA_03753	0.63	-0.6
3,923,313	+		CCNA_03753	0.65	-0.8
3,923,314	+		CCNA_03753	0.65	+0.4
3,923,318	-		CCNA_03753	0.65	+0.0
3,923,331	+		CCNA_03753	0.66	-1.0
3,923,371	-		CCNA_03753	0.70	-0.6
3,923,374	+		CCNA_03753	0.70	-0.3
3,923,413	-		CCNA_03753	0.74	+0.1
3,923,468	-		CCNA_03753	0.79	+1.2
3,923,517	+		CCNA_03753	0.83	-1.3
3,923,517	+		CCNA_03753	0.83	-0.8
3,923,522	+		CCNA_03753	0.83	-0.3
3,923,525	-		CCNA_03753	0.84	-0.6
3,923,530	-		CCNA_03753	0.84	+0.3
3,923,558	+		CCNA_03753	0.87	-0.6
3,923,576	+		CCNA_03753	0.88	-1.6