Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03205

Experiment: PYE with CHIR-090 40 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 40 ug/mL
3,365,496	+		CCNA_03204	0.43	-0.2
3,365,504	-		CCNA_03204	0.44	-0.0
3,365,509	-		CCNA_03204	0.44	-1.1
3,365,528	+		CCNA_03204	0.46	-0.1
3,365,528	+		CCNA_03204	0.46	+0.1
3,365,528	+		CCNA_03204	0.46	-0.4
3,365,528	+		CCNA_03204	0.46	+0.4
3,365,528	+		CCNA_03204	0.46	+0.1
3,365,528	+		CCNA_03204	0.46	-0.2
3,365,528	+		CCNA_03204	0.46	+0.0
3,365,528	+		CCNA_03204	0.46	+0.7
3,365,528	+		CCNA_03204	0.46	+0.6
3,365,528	+		CCNA_03204	0.46	+0.7
3,365,528	+		CCNA_03204	0.46	+1.4
3,365,528	+		CCNA_03204	0.46	+0.1
3,365,528	+		CCNA_03204	0.46	-0.3
3,365,528	+		CCNA_03204	0.46	+0.4
3,365,528	+		CCNA_03204	0.46	+0.6
3,365,528	+		CCNA_03204	0.46	+0.4
3,365,536	-		CCNA_03204	0.47	+1.4
3,365,536	-		CCNA_03204	0.47	+0.3
3,365,536	-		CCNA_03204	0.47	+0.4
3,365,536	-		CCNA_03204	0.47	-0.3
3,365,536	-		CCNA_03204	0.47	+0.2
3,365,536	-		CCNA_03204	0.47	+0.1
3,365,536	-		CCNA_03204	0.47	+0.4
3,365,536	-		CCNA_03204	0.47	-0.1
3,365,536	-		CCNA_03204	0.47	-0.0
3,365,536	-		CCNA_03204	0.47	+0.2
3,365,536	-		CCNA_03204	0.47	-0.1
3,365,536	-		CCNA_03204	0.47	-1.1
3,365,536	-		CCNA_03204	0.47	+0.3
3,365,570	+		CCNA_03204	0.49	+1.3
3,365,570	+		CCNA_03204	0.49	-0.3
3,365,595	+		CCNA_03204	0.52	+0.0
3,365,603	-		CCNA_03204	0.52	-0.1
3,365,613	-		CCNA_03204	0.53	+0.3
3,365,649	+		CCNA_03204	0.56	-0.1
3,365,659	-		CCNA_03204	0.57	-0.4
3,365,678	-		CCNA_03204	0.58	-0.3
3,365,696	+		CCNA_03204	0.60	+0.2
3,365,710	-		CCNA_03204	0.61	+0.4
3,365,711	-		CCNA_03204	0.61	+0.3
3,365,748	+		CCNA_03204	0.64	-0.5
3,365,748	+		CCNA_03204	0.64	+0.4
3,365,748	+		CCNA_03204	0.64	-0.0
3,365,756	-		CCNA_03204	0.65	+0.8
3,365,756	-		CCNA_03204	0.65	+0.3
3,365,803	+		CCNA_03204	0.69	+0.1
3,365,809	+		CCNA_03204	0.69	-0.5
3,365,810	-		CCNA_03204	0.69	-0.8
3,365,832	+		CCNA_03204	0.71	-0.1
3,365,840	-		CCNA_03204	0.72	-0.9
3,365,865	-		CCNA_03204	0.74	-0.7
3,365,870	-		CCNA_03204	0.74	+0.9
3,365,885	+		CCNA_03204	0.76	-0.2
3,365,937	+		CCNA_03204	0.80	-2.4
3,365,949	-		CCNA_03204	0.81	+0.1
3,365,977	+		CCNA_03204	0.83	+0.4
3,365,977	+		CCNA_03204	0.83	-1.5
3,365,984	+		CCNA_03204	0.84	-0.1
3,365,985	-		CCNA_03204	0.84	-1.7
3,365,991	-		CCNA_03204	0.84	-0.4
3,366,021	+		CCNA_03204	0.87	+0.1
3,366,027	+		CCNA_03204	0.87	+1.4
3,366,035	-		CCNA_03204	0.88	-0.3
3,366,068	+				+0.6
3,366,137	-				+0.6
3,366,152	-				-0.4
3,366,161	+				+0.7
3,366,161	+				+0.1
3,366,169	-				-0.2
3,366,169	-				+0.1
3,366,181	+				+0.6
3,366,188	+				-0.2
3,366,323	+				-0.5
3,366,356	+				-0.0
3,366,364	-				-0.8
3,366,364	-				+0.2
3,366,364	-				+0.2
3,366,364	-				-0.3
3,366,396	+				+0.1
3,366,461	+				-0.0
3,366,493	-				-0.9
3,366,504	+				+0.1
3,366,504	+				+0.5
3,366,504	+				-0.2
3,366,504	+				+0.2
3,366,504	+				+0.7
3,366,512	-				-2.8
3,366,512	-				-2.0
3,366,526	-				-1.2
3,366,535	-				-0.2
3,366,556	+				+0.8
3,366,561	+				-0.2
3,366,591	+		CCNA_03205	0.11	-0.1
3,366,591	+		CCNA_03205	0.11	+0.2
3,366,591	+		CCNA_03205	0.11	+0.1
3,366,591	+		CCNA_03205	0.11	-1.5
3,366,599	-		CCNA_03205	0.12	+0.4
3,366,599	-		CCNA_03205	0.12	-1.0
3,366,599	-		CCNA_03205	0.12	-1.1
3,366,606	+		CCNA_03205	0.12	-0.2
3,366,613	-		CCNA_03205	0.13	-1.1
3,366,613	-		CCNA_03205	0.13	-1.0
3,366,680	-		CCNA_03205	0.17	-0.1
3,366,710	-		CCNA_03205	0.18	-0.1
3,366,716	-		CCNA_03205	0.19	-0.2
3,366,721	-		CCNA_03205	0.19	-2.4
3,366,722	+		CCNA_03205	0.19	-0.0
3,366,722	+		CCNA_03205	0.19	+1.1
3,366,727	+		CCNA_03205	0.19	+1.2
3,366,756	-		CCNA_03205	0.21	-0.8
3,366,763	+		CCNA_03205	0.22	-0.1
3,366,774	+		CCNA_03205	0.22	+0.4
3,366,832	-		CCNA_03205	0.26	-1.8
3,366,853	-		CCNA_03205	0.27	-0.7
3,366,855	+		CCNA_03205	0.27	+0.1
3,366,876	+		CCNA_03205	0.28	-1.7
3,366,912	+		CCNA_03205	0.31	+0.4
3,366,941	-		CCNA_03205	0.32	-0.9
3,366,945	+		CCNA_03205	0.33	-0.2
3,366,956	+		CCNA_03205	0.33	+1.4
3,366,959	-		CCNA_03205	0.33	+0.4
3,366,977	+		CCNA_03205	0.35	+1.5
3,367,028	+		CCNA_03205	0.38	+1.7
3,367,049	+		CCNA_03205	0.39	-1.2
3,367,057	-		CCNA_03205	0.39	-0.4
3,367,092	-		CCNA_03205	0.42	-2.0
3,367,092	-		CCNA_03205	0.42	+0.4
3,367,113	-		CCNA_03205	0.43	+0.4
3,367,165	-		CCNA_03205	0.46	+0.3
3,367,167	+		CCNA_03205	0.46	-0.3
3,367,175	-		CCNA_03205	0.47	-2.4
3,367,175	-		CCNA_03205	0.47	-0.3
3,367,175	-		CCNA_03205	0.47	-0.3
3,367,188	-		CCNA_03205	0.47	-0.8
3,367,196	-		CCNA_03205	0.48	+0.1
3,367,200	+		CCNA_03205	0.48	+0.0
3,367,203	-		CCNA_03205	0.48	+0.4
3,367,231	-		CCNA_03205	0.50	-2.0
3,367,237	+		CCNA_03205	0.50	-0.2
3,367,237	+		CCNA_03205	0.50	-0.7
3,367,274	-		CCNA_03205	0.53	-0.1
3,367,274	-		CCNA_03205	0.53	+0.5
3,367,277	+		CCNA_03205	0.53	+0.9
3,367,280	-		CCNA_03205	0.53	+1.1
3,367,281	+		CCNA_03205	0.53	-1.2
3,367,323	+		CCNA_03205	0.55	+0.3
3,367,379	-		CCNA_03205	0.59	-0.9
3,367,450	+		CCNA_03205	0.63	+0.8
3,367,483	+		CCNA_03205	0.65	+0.9
3,367,490	-		CCNA_03205	0.66	-1.0
3,367,501	+		CCNA_03205	0.66	+0.2
3,367,528	-		CCNA_03205	0.68	-2.6
3,367,567	-		CCNA_03205	0.70	-0.8
3,367,569	+		CCNA_03205	0.70	-0.5
3,367,581	+		CCNA_03205	0.71	-0.6
3,367,589	-		CCNA_03205	0.72	-0.5
3,367,599	+		CCNA_03205	0.72	+0.5
3,367,633	+		CCNA_03205	0.74	+0.6
3,367,641	-		CCNA_03205	0.75	-1.1
3,367,695	+		CCNA_03205	0.78	-0.2
3,367,789	+		CCNA_03205	0.84	+0.5
3,367,806	-		CCNA_03205	0.85	-0.5
3,367,808	+		CCNA_03205	0.85	-0.7
3,367,808	+		CCNA_03205	0.85	-1.0
3,367,813	+		CCNA_03205	0.85	+0.3
3,367,821	-		CCNA_03205	0.86	+0.5
3,367,821	-		CCNA_03205	0.86	-1.5
3,367,888	-		CCNA_03205	0.90	-0.1
3,367,888	-		CCNA_03205	0.90	-0.4
3,367,913	-				-0.3
3,367,946	+				+0.6
3,367,958	-				+0.7
3,367,958	-				-0.7
3,367,987	-				-0.3
3,367,999	-				+0.1
3,368,016	+				+0.6
3,368,016	+				+0.8
3,368,016	+				+0.4
3,368,016	+				+0.2
3,368,016	+				+0.6
3,368,024	-				-0.3
3,368,094	+				-0.2
3,368,102	-				+0.2
3,368,134	-				+0.2
3,368,140	+				+0.7
3,368,141	+				+0.6
3,368,149	-				-2.1
3,368,155	-				+0.7
3,368,189	-				-0.0
3,368,194	+				-1.0
3,368,202	-				-0.6
3,368,234	-				-1.6
3,368,234	-				-0.3
3,368,234	-				+0.2
3,368,234	-				-2.4
3,368,244	-				-0.2
3,368,256	+				+0.3
3,368,327	-				+0.5
3,368,395	+				-0.1
3,368,407	+		CCNA_03206	0.11	+0.2
3,368,407	+		CCNA_03206	0.11	-0.6
3,368,407	+		CCNA_03206	0.11	-0.4
3,368,407	+		CCNA_03206	0.11	+0.9
3,368,407	+		CCNA_03206	0.11	+1.2
3,368,415	-		CCNA_03206	0.11	+0.1
3,368,415	-		CCNA_03206	0.11	+0.8
3,368,415	-		CCNA_03206	0.11	-1.1
3,368,426	-		CCNA_03206	0.12	-0.4
3,368,426	-		CCNA_03206	0.12	-1.1
3,368,476	-		CCNA_03206	0.15	-2.7
3,368,494	+		CCNA_03206	0.17	-0.2
3,368,530	-		CCNA_03206	0.19	-0.6
3,368,530	-		CCNA_03206	0.19	+0.2
3,368,610	+		CCNA_03206	0.25	+0.1
3,368,639	+		CCNA_03206	0.27	+0.8
3,368,647	-		CCNA_03206	0.28	+0.0
3,368,674	+		CCNA_03206	0.30	+0.1
3,368,677	-		CCNA_03206	0.30	-0.6
3,368,682	-		CCNA_03206	0.30	-0.9
3,368,736	-		CCNA_03206	0.34	-1.7
3,368,793	+		CCNA_03206	0.38	-0.3
3,368,825	+		CCNA_03206	0.41	-0.2
3,368,842	+		CCNA_03206	0.42	-0.8
3,368,850	-		CCNA_03206	0.42	-0.9
3,368,876	-		CCNA_03206	0.44	-1.2
3,368,960	+		CCNA_03206	0.50	+0.2
3,368,984	-		CCNA_03206	0.52	-1.8