Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03050

Experiment: PYE with CHIR-090 40 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 40 ug/mL
3,203,626	-		CCNA_03049	0.41	+0.5
3,203,637	-		CCNA_03049	0.42	+0.7
3,203,664	-		CCNA_03049	0.44	-0.9
3,203,664	-		CCNA_03049	0.44	-0.1
3,203,666	+		CCNA_03049	0.44	-0.9
3,203,695	-		CCNA_03049	0.46	-0.7
3,203,695	-		CCNA_03049	0.46	-0.2
3,203,784	-		CCNA_03049	0.52	-0.7
3,203,827	+		CCNA_03049	0.55	+0.3
3,203,827	+		CCNA_03049	0.55	-1.2
3,203,827	+		CCNA_03049	0.55	+0.3
3,203,882	-		CCNA_03049	0.59	-0.2
3,203,910	+		CCNA_03049	0.61	-0.7
3,203,949	+		CCNA_03049	0.63	-1.9
3,203,949	+		CCNA_03049	0.63	-0.1
3,203,949	+		CCNA_03049	0.63	-0.6
3,203,949	+		CCNA_03049	0.63	-0.8
3,203,952	-		CCNA_03049	0.64	+0.6
3,203,957	-		CCNA_03049	0.64	+1.3
3,203,957	-		CCNA_03049	0.64	+0.9
3,203,963	+		CCNA_03049	0.64	-1.5
3,203,963	+		CCNA_03049	0.64	+0.5
3,203,970	+		CCNA_03049	0.65	+1.2
3,203,970	+		CCNA_03049	0.65	+0.7
3,203,970	+		CCNA_03049	0.65	+0.2
3,203,977	-		CCNA_03049	0.65	+1.0
3,203,999	+		CCNA_03049	0.67	+0.7
3,204,019	-		CCNA_03049	0.68	-0.0
3,204,027	+		CCNA_03049	0.69	+0.3
3,204,027	+		CCNA_03049	0.69	-2.5
3,204,027	+		CCNA_03049	0.69	-1.3
3,204,027	+		CCNA_03049	0.69	-0.5
3,204,027	+		CCNA_03049	0.69	-0.3
3,204,035	-		CCNA_03049	0.69	-1.0
3,204,035	-		CCNA_03049	0.69	+0.1
3,204,035	-		CCNA_03049	0.69	-1.3
3,204,057	-		CCNA_03049	0.71	+0.6
3,204,057	-		CCNA_03049	0.71	-0.6
3,204,066	-		CCNA_03049	0.71	+0.2
3,204,068	+		CCNA_03049	0.72	+0.0
3,204,102	-		CCNA_03049	0.74	+2.3
3,204,114	-		CCNA_03049	0.75	-0.0
3,204,136	-		CCNA_03049	0.76	-0.6
3,204,161	+		CCNA_03049	0.78	+0.3
3,204,169	-		CCNA_03049	0.78	-1.8
3,204,175	+		CCNA_03049	0.79	-0.1
3,204,192	-		CCNA_03049	0.80	+0.1
3,204,215	+		CCNA_03049	0.82	-0.9
3,204,215	+		CCNA_03049	0.82	+0.2
3,204,216	+		CCNA_03049	0.82	-2.8
3,204,223	-		CCNA_03049	0.82	+0.7
3,204,252	+		CCNA_03049	0.84	-0.7
3,204,261	-		CCNA_03049	0.85	-0.3
3,204,308	-		CCNA_03049	0.88	-0.5
3,204,320	+		CCNA_03049	0.89	-0.6
3,204,330	-		CCNA_03049	0.89	+0.1
3,204,350	+				+0.9
3,204,352	+				-0.3
3,204,360	-				+0.1
3,204,367	+				-1.3
3,204,367	+				+0.1
3,204,367	+				+1.3
3,204,367	+				+0.0
3,204,367	+				+0.3
3,204,375	-				-0.8
3,204,375	-				-0.5
3,204,375	-				-0.1
3,204,407	+				-1.0
3,204,435	+				-0.4
3,204,435	+				-0.5
3,204,449	-				-0.9
3,204,472	+				+0.4
3,204,479	+				+0.1
3,204,493	+				+0.4
3,204,561	+				+0.8
3,204,561	+				-0.7
3,204,569	-				+0.8
3,204,602	+				-0.4
3,204,602	+				+0.4
3,204,602	+				+0.1
3,204,602	+				-1.0
3,204,610	-				+0.1
3,204,610	-				+0.9
3,204,610	-				+1.1
3,204,610	-				+0.2
3,204,610	-				+0.3
3,204,610	-				+0.2
3,204,610	-				-0.6
3,204,610	-				+0.2
3,204,610	-				+0.4
3,204,612	+				-0.6
3,204,620	-				+0.4
3,204,627	-				+0.9
3,204,663	+				-1.7
3,204,663	+				-0.2
3,204,663	+				-3.1
3,204,671	-				+0.3
3,204,671	-				+1.4
3,204,676	-				+0.1
3,204,741	+		CCNA_03050	0.16	-1.6
3,204,803	+		CCNA_03050	0.24	+0.6
3,204,806	+		CCNA_03050	0.24	-0.2
3,204,922	+		CCNA_03050	0.39	-1.0
3,204,950	-		CCNA_03050	0.43	-0.1
3,204,958	+		CCNA_03050	0.44	+1.9
3,204,963	+		CCNA_03050	0.44	+0.5
3,204,963	+		CCNA_03050	0.44	-0.7
3,205,024	-		CCNA_03050	0.52	-0.2
3,205,024	-		CCNA_03050	0.52	+0.3
3,205,061	-		CCNA_03050	0.57	-0.2
3,205,071	-		CCNA_03050	0.58	+1.7
3,205,076	-		CCNA_03050	0.59	-0.2
3,205,091	+		CCNA_03050	0.61	+0.3
3,205,101	-		CCNA_03050	0.62	+1.2
3,205,150	-		CCNA_03050	0.68	+0.1
3,205,170	-		CCNA_03050	0.71	+0.4
3,205,195	+		CCNA_03050	0.74	+0.9
3,205,205	+		CCNA_03050	0.75	-0.8
3,205,205	+		CCNA_03050	0.75	-0.7
3,205,213	-		CCNA_03050	0.76	+0.3
3,205,213	-		CCNA_03050	0.76	+2.3
3,205,213	-		CCNA_03050	0.76	-0.2
3,205,213	-		CCNA_03050	0.76	-0.1
3,205,215	+		CCNA_03050	0.77	-1.4
3,205,237	-		CCNA_03050	0.80	+0.7
3,205,243	+		CCNA_03050	0.80	+0.9
3,205,263	+		CCNA_03050	0.83	-0.7
3,205,271	-		CCNA_03050	0.84	-0.4
3,205,276	+		CCNA_03050	0.85	+0.3
3,205,282	+		CCNA_03050	0.85	+0.3
3,205,307	-		CCNA_03050	0.89	-0.1
3,205,331	-				+0.2
3,205,361	+				+1.3
3,205,362	+				+0.0
3,205,376	-				+0.5
3,205,430	-				-0.2
3,205,451	+				-0.8
3,205,451	+				-1.6
3,205,451	+				-0.9
3,205,459	-				-0.6
3,205,483	+				-1.6
3,205,483	+				-0.7
3,205,483	+				+0.3
3,205,483	+				-0.1
3,205,491	-				-0.1
3,205,491	-				+0.3
3,205,491	-				+0.3
3,205,491	-				+1.1
3,205,491	-				-1.1
3,205,491	-				+0.1
3,205,492	-				+1.7
3,205,504	+				+0.1
3,205,525	+				-1.8
3,205,559	-				+0.0
3,205,582	-				-0.2
3,205,582	-				+0.7
3,205,649	+		CCNA_03051	0.19	+1.0
3,205,649	+		CCNA_03051	0.19	+0.3
3,205,649	+		CCNA_03051	0.19	+0.3
3,205,657	-		CCNA_03051	0.21	-0.0
3,205,657	-		CCNA_03051	0.21	-1.1
3,205,657	-		CCNA_03051	0.21	+0.6
3,205,662	-		CCNA_03051	0.22	+0.2
3,205,698	+		CCNA_03051	0.31	+0.3
3,205,793	-		CCNA_03051	0.55	+0.4
3,205,828	+		CCNA_03051	0.64	+0.2
3,205,828	+		CCNA_03051	0.64	+0.4
3,205,836	-		CCNA_03051	0.66	+0.1
3,205,836	-		CCNA_03051	0.66	+0.5
3,205,836	-		CCNA_03051	0.66	-0.7
3,205,855	-		CCNA_03051	0.71	+0.1
3,205,862	+		CCNA_03051	0.72	-0.0
3,205,862	+		CCNA_03051	0.72	-0.3
3,205,870	-		CCNA_03051	0.74	+0.7
3,205,882	+		CCNA_03051	0.77	+0.1
3,205,890	-		CCNA_03051	0.79	-0.4
3,205,890	-		CCNA_03051	0.79	-0.3
3,205,908	+		CCNA_03051	0.84	+0.6
3,205,908	+		CCNA_03051	0.84	-1.3
3,205,916	-		CCNA_03051	0.86	-0.1
3,205,964	-				+1.0
3,206,009	+				+0.8
3,206,034	+				+0.4
3,206,147	-				+1.9
3,206,156	+				-0.3
3,206,166	+				+0.3
3,206,166	+				-0.9
3,206,230	-				-0.4
3,206,267	-				-2.6
3,206,299	-		CCNA_03052	0.11	-1.9
3,206,367	-		CCNA_03052	0.16	-1.9
3,206,379	-		CCNA_03052	0.17	-0.8
3,206,379	-		CCNA_03052	0.17	-1.3