Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03023

Experiment: PYE with CHIR-090 40 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 40 ug/mL
3,175,972	+		CCNA_03022	0.12	-0.3
3,175,973	-		CCNA_03022	0.12	+0.1
3,175,973	-		CCNA_03022	0.12	+1.2
3,175,974	-		CCNA_03022	0.12	+0.3
3,176,033	+		CCNA_03022	0.17	-1.0
3,176,041	-		CCNA_03022	0.18	+0.5
3,176,049	-		CCNA_03022	0.19	-0.3
3,176,076	+		CCNA_03022	0.21	-0.8
3,176,101	+		CCNA_03022	0.23	-0.8
3,176,193	+		CCNA_03022	0.31	-0.2
3,176,196	-		CCNA_03022	0.31	-0.3
3,176,206	-		CCNA_03022	0.32	+0.4
3,176,217	+		CCNA_03022	0.33	-0.1
3,176,217	+		CCNA_03022	0.33	-0.7
3,176,225	-		CCNA_03022	0.34	+0.1
3,176,225	-		CCNA_03022	0.34	-0.2
3,176,225	-		CCNA_03022	0.34	+0.0
3,176,354	+		CCNA_03022	0.44	-0.1
3,176,354	+		CCNA_03022	0.44	+0.1
3,176,360	+		CCNA_03022	0.45	+0.3
3,176,362	-		CCNA_03022	0.45	-0.2
3,176,385	+		CCNA_03022	0.47	+0.6
3,176,385	+		CCNA_03022	0.47	-0.4
3,176,448	-		CCNA_03022	0.52	-0.2
3,176,448	-		CCNA_03022	0.52	-0.3
3,176,466	-		CCNA_03022	0.54	+0.8
3,176,476	-		CCNA_03022	0.55	-0.1
3,176,479	+		CCNA_03022	0.55	-2.8
3,176,479	+		CCNA_03022	0.55	+0.5
3,176,605	+		CCNA_03022	0.66	-2.3
3,176,682	+		CCNA_03022	0.72	+0.5
3,176,682	+		CCNA_03022	0.72	+0.7
3,176,734	+		CCNA_03022	0.77	-0.9
3,176,734	+		CCNA_03022	0.77	+0.2
3,176,749	-		CCNA_03022	0.78	+0.3
3,176,749	-		CCNA_03022	0.78	-0.1
3,176,749	-		CCNA_03022	0.78	+0.8
3,176,775	-		CCNA_03022	0.80	-0.9
3,176,789	-		CCNA_03022	0.81	+0.8
3,177,049	-				+0.7
3,177,134	-				+0.5
3,177,135	+				+0.1
3,177,135	+				-0.2
3,177,143	-		CCNA_03023	0.10	+0.1
3,177,172	+		CCNA_03023	0.12	+0.0
3,177,225	+		CCNA_03023	0.14	+1.7
3,177,233	-		CCNA_03023	0.14	+0.3
3,177,233	-		CCNA_03023	0.14	-0.3
3,177,275	-		CCNA_03023	0.16	+0.3
3,177,403	+		CCNA_03023	0.22	-1.0
3,177,427	-		CCNA_03023	0.23	+0.7
3,177,427	-		CCNA_03023	0.23	+0.2
3,177,515	-		CCNA_03023	0.27	-0.1
3,177,542	-		CCNA_03023	0.29	-0.0
3,177,560	-		CCNA_03023	0.30	+0.0
3,177,560	-		CCNA_03023	0.30	-0.0
3,177,565	-		CCNA_03023	0.30	+0.2
3,177,571	-		CCNA_03023	0.30	+0.2
3,177,584	+		CCNA_03023	0.31	-0.6
3,177,630	+		CCNA_03023	0.33	+0.6
3,177,640	-		CCNA_03023	0.33	-0.1
3,177,724	-		CCNA_03023	0.37	+0.7
3,177,724	-		CCNA_03023	0.37	+0.1
3,177,735	-		CCNA_03023	0.38	+0.2
3,177,747	+		CCNA_03023	0.38	-2.4
3,177,788	-		CCNA_03023	0.40	+0.1
3,177,803	-		CCNA_03023	0.41	-0.3
3,177,948	+		CCNA_03023	0.47	-1.0
3,177,956	-		CCNA_03023	0.48	+0.5
3,178,103	+		CCNA_03023	0.55	-1.3
3,178,106	-		CCNA_03023	0.55	+1.0
3,178,112	+		CCNA_03023	0.55	+0.1
3,178,127	-		CCNA_03023	0.56	+0.7
3,178,144	-		CCNA_03023	0.56	+0.6
3,178,179	-		CCNA_03023	0.58	+0.8
3,178,221	+		CCNA_03023	0.60	-1.5
3,178,221	+		CCNA_03023	0.60	+0.9
3,178,221	+		CCNA_03023	0.60	+0.2
3,178,221	+		CCNA_03023	0.60	+0.6
3,178,221	+		CCNA_03023	0.60	+0.9
3,178,221	+		CCNA_03023	0.60	-0.1
3,178,221	+		CCNA_03023	0.60	-2.9
3,178,221	+		CCNA_03023	0.60	-0.9
3,178,221	+		CCNA_03023	0.60	+0.2
3,178,229	-		CCNA_03023	0.60	+0.9
3,178,246	-		CCNA_03023	0.61	+0.1
3,178,257	+		CCNA_03023	0.62	-0.1
3,178,257	+		CCNA_03023	0.62	-2.0
3,178,257	+		CCNA_03023	0.62	-0.2
3,178,265	-		CCNA_03023	0.62	+0.9
3,178,317	+		CCNA_03023	0.64	-2.2
3,178,325	-		CCNA_03023	0.65	+0.3
3,178,330	-		CCNA_03023	0.65	+0.4
3,178,360	+		CCNA_03023	0.66	+0.4
3,178,361	+		CCNA_03023	0.66	-0.1
3,178,374	-		CCNA_03023	0.67	+0.3
3,178,442	-		CCNA_03023	0.70	+0.3
3,178,442	-		CCNA_03023	0.70	+0.7
3,178,460	+		CCNA_03023	0.71	-0.1
3,178,465	+		CCNA_03023	0.71	+0.0
3,178,493	+		CCNA_03023	0.73	-1.1
3,178,494	+		CCNA_03023	0.73	-1.6
3,178,494	+		CCNA_03023	0.73	-0.8
3,178,502	-		CCNA_03023	0.73	-0.1
3,178,502	-		CCNA_03023	0.73	+0.3
3,178,522	-		CCNA_03023	0.74	+0.8
3,178,543	-		CCNA_03023	0.75	-0.9
3,178,578	-		CCNA_03023	0.77	+0.3
3,178,621	-		CCNA_03023	0.78	+0.3
3,178,641	+		CCNA_03023	0.79	+1.7
3,178,694	+		CCNA_03023	0.82	-1.1
3,178,711	-		CCNA_03023	0.83	+0.1
3,178,717	+		CCNA_03023	0.83	+1.4
3,178,730	-		CCNA_03023	0.84	+0.5
3,178,751	-		CCNA_03023	0.84	+1.3
3,178,754	-		CCNA_03023	0.85	+0.2
3,178,754	-		CCNA_03023	0.85	+0.6
3,178,754	-		CCNA_03023	0.85	-0.3
3,178,754	-		CCNA_03023	0.85	+0.2
3,178,767	+		CCNA_03023	0.85	+0.5
3,178,799	+		CCNA_03023	0.87	+0.9
3,178,807	-		CCNA_03023	0.87	+0.2
3,178,849	-		CCNA_03023	0.89	-1.4
3,178,862	-		CCNA_03023	0.90	+0.9
3,178,896	-				+0.5
3,179,035	+				+0.3
3,179,048	-				-0.1
3,179,050	+				-0.4
3,179,062	+				+0.7
3,179,063	-				+0.3
3,179,069	+				+0.4
3,179,077	-				+0.5
3,179,135	-				-1.2
3,179,137	+				-0.1
3,179,151	-				+0.2
3,179,185	-				+1.4
3,179,202	-				+0.5
3,179,224	+				+0.1
3,179,224	+				-0.1
3,179,232	-				+0.3
3,179,299	+				-0.7
3,179,308	-				-0.2
3,179,332	-				-0.1
3,179,334	+				+0.3
3,179,334	+				-0.1
3,179,368	-				+0.1
3,179,386	+				+0.2
3,179,410	-		CCNA_03024	0.12	+2.1
3,179,420	+		CCNA_03024	0.13	-1.2
3,179,421	-		CCNA_03024	0.13	+0.4
3,179,465	+		CCNA_03024	0.18	+2.3
3,179,503	+		CCNA_03024	0.22	+0.6
3,179,503	-		CCNA_03024	0.22	+0.6
3,179,509	+		CCNA_03024	0.23	-0.0
3,179,509	+		CCNA_03024	0.23	+0.3
3,179,509	+		CCNA_03024	0.23	+0.7
3,179,509	+		CCNA_03024	0.23	-0.5
3,179,509	+		CCNA_03024	0.23	+0.2
3,179,511	-		CCNA_03024	0.23	+0.3
3,179,517	-		CCNA_03024	0.24	-0.5
3,179,517	-		CCNA_03024	0.24	+0.7
3,179,526	-		CCNA_03024	0.25	+0.5
3,179,537	+		CCNA_03024	0.26	-1.5
3,179,648	-		CCNA_03024	0.38	+0.3
3,179,703	-		CCNA_03024	0.44	+0.6
3,179,703	-		CCNA_03024	0.44	-0.9
3,179,703	-		CCNA_03024	0.44	+0.2
3,179,703	-		CCNA_03024	0.44	-0.5
3,179,704	+		CCNA_03024	0.45	-0.8
3,179,709	-		CCNA_03024	0.45	-0.1
3,179,740	+		CCNA_03024	0.49	-0.6
3,179,740	+		CCNA_03024	0.49	-0.2
3,179,740	+		CCNA_03024	0.49	+0.2
3,179,740	+		CCNA_03024	0.49	-0.5
3,179,748	-		CCNA_03024	0.49	+0.2
3,179,748	-		CCNA_03024	0.49	-0.3
3,179,748	-		CCNA_03024	0.49	-0.3
3,179,767	+		CCNA_03024	0.52	-0.9
3,179,772	+		CCNA_03024	0.52	+0.1
3,179,772	+		CCNA_03024	0.52	-1.1
3,179,780	-		CCNA_03024	0.53	+0.5
3,179,780	-		CCNA_03024	0.53	+0.5
3,179,780	-		CCNA_03024	0.53	+1.9
3,179,780	-		CCNA_03024	0.53	-0.0
3,179,785	+		CCNA_03024	0.54	-1.2
3,179,785	+		CCNA_03024	0.54	-1.0
3,179,785	+		CCNA_03024	0.54	+1.1
3,179,785	+		CCNA_03024	0.54	-2.8
3,179,793	-		CCNA_03024	0.55	+0.6
3,179,793	-		CCNA_03024	0.55	+0.6
3,179,793	-		CCNA_03024	0.55	-0.5
3,179,804	+		CCNA_03024	0.56	-0.1
3,179,831	-		CCNA_03024	0.59	-0.7
3,179,846	-		CCNA_03024	0.60	+0.4
3,179,856	-		CCNA_03024	0.62	-0.3
3,179,859	-		CCNA_03024	0.62	+0.4
3,179,918	+		CCNA_03024	0.69	-1.7
3,179,918	+		CCNA_03024	0.69	+0.9
3,179,918	+		CCNA_03024	0.69	+0.5
3,179,927	-		CCNA_03024	0.70	-0.3
3,179,936	-		CCNA_03024	0.71	-1.1
3,179,955	-		CCNA_03024	0.73	+0.4
3,179,970	-		CCNA_03024	0.74	+0.3
3,179,974	+		CCNA_03024	0.75	+2.5
3,179,974	+		CCNA_03024	0.75	-0.3
3,179,974	+		CCNA_03024	0.75	-0.4
3,179,974	+		CCNA_03024	0.75	-1.0
3,179,982	-		CCNA_03024	0.76	-0.2
3,179,982	-		CCNA_03024	0.76	+0.2
3,179,982	-		CCNA_03024	0.76	+0.8
3,180,005	-		CCNA_03024	0.78	-0.9
3,180,046	-		CCNA_03024	0.83	+0.3
3,180,078	-		CCNA_03024	0.87	-0.1