Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_02949

Experiment: PYE with CHIR-090 40 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 40 ug/mL
3,108,250	+		CCNA_02947	0.70	-0.1
3,108,276	+		CCNA_02947	0.73	-0.0
3,108,313	-		CCNA_02947	0.76	-0.7
3,108,314	-		CCNA_02947	0.76	-0.5
3,108,316	+		CCNA_02947	0.77	-0.9
3,108,324	-		CCNA_02947	0.77	+0.0
3,108,374	-		CCNA_02947	0.82	+0.1
3,108,392	+		CCNA_02947	0.84	+0.0
3,108,433	-		CCNA_02947	0.88	-0.1
3,108,434	-		CCNA_02947	0.88	+0.3
3,108,464	-				-1.1
3,108,469	-				+0.4
3,108,469	-				+0.5
3,108,570	-				-0.7
3,108,590	+		CCNA_02948	0.13	+2.3
3,108,590	+		CCNA_02948	0.13	-0.2
3,108,590	+		CCNA_02948	0.13	+0.7
3,108,596	-		CCNA_02948	0.14	-2.8
3,108,598	-		CCNA_02948	0.15	+1.4
3,108,600	+		CCNA_02948	0.15	-0.1
3,108,624	+		CCNA_02948	0.22	+0.1
3,108,655	+		CCNA_02948	0.30	-0.3
3,108,655	+		CCNA_02948	0.30	-0.0
3,108,655	+		CCNA_02948	0.30	+1.2
3,108,663	-		CCNA_02948	0.33	-0.5
3,108,663	-		CCNA_02948	0.33	+1.2
3,108,663	-		CCNA_02948	0.33	-0.6
3,108,671	+		CCNA_02948	0.35	-0.5
3,108,734	+		CCNA_02948	0.52	+0.0
3,108,744	+		CCNA_02948	0.55	-0.1
3,108,757	+		CCNA_02948	0.58	+2.0
3,108,798	+		CCNA_02948	0.69	+2.2
3,108,803	+		CCNA_02948	0.71	-0.4
3,108,816	-		CCNA_02948	0.74	+0.7
3,108,831	+		CCNA_02948	0.78	-0.0
3,108,839	-		CCNA_02948	0.81	-2.8
3,108,878	+				+0.3
3,108,878	+				+1.6
3,108,886	-				+0.2
3,108,886	-				-0.7
3,108,886	-				-0.7
3,108,903	+				-0.3
3,108,903	+				+0.3
3,108,903	+				-1.8
3,108,926	+				+0.6
3,108,952	-				-1.2
3,108,952	-				-0.8
3,108,962	-				-0.1
3,108,962	-				-0.2
3,109,010	-				-2.2
3,109,024	-				+1.5
3,109,059	+				+0.3
3,109,059	+				-1.4
3,109,067	-				+0.7
3,109,106	+				-0.6
3,109,106	+				-1.4
3,109,106	+				-0.4
3,109,108	-				+1.4
3,109,114	-				+0.6
3,109,114	-				-0.5
3,109,114	-				+0.6
3,109,116	+				-0.2
3,109,133	+				-1.0
3,109,133	+				-0.3
3,109,133	+				+0.5
3,109,141	-				-0.4
3,109,141	-				+0.0
3,109,158	-				+0.6
3,109,167	-				+0.8
3,109,176	+				-1.4
3,109,313	+		CCNA_02949	0.10	+1.5
3,109,319	+		CCNA_02949	0.11	+0.7
3,109,319	+		CCNA_02949	0.11	+0.3
3,109,380	+		CCNA_02949	0.21	-0.4
3,109,390	+		CCNA_02949	0.22	+1.0
3,109,397	+		CCNA_02949	0.23	+0.3
3,109,402	+		CCNA_02949	0.24	-0.1
3,109,402	+		CCNA_02949	0.24	+0.4
3,109,410	-		CCNA_02949	0.25	-0.8
3,109,410	-		CCNA_02949	0.25	+1.3
3,109,410	-		CCNA_02949	0.25	+0.1
3,109,466	+		CCNA_02949	0.34	+0.7
3,109,466	+		CCNA_02949	0.34	+0.2
3,109,474	-		CCNA_02949	0.35	+0.7
3,109,489	-		CCNA_02949	0.38	+1.3
3,109,491	+		CCNA_02949	0.38	+0.6
3,109,491	+		CCNA_02949	0.38	+0.2
3,109,499	-		CCNA_02949	0.39	+0.3
3,109,499	-		CCNA_02949	0.39	-0.4
3,109,499	-		CCNA_02949	0.39	-0.3
3,109,549	-		CCNA_02949	0.47	-1.4
3,109,549	-		CCNA_02949	0.47	-1.9
3,109,583	-		CCNA_02949	0.52	-0.3
3,109,583	-		CCNA_02949	0.52	-1.2
3,109,585	+		CCNA_02949	0.52	-0.6
3,109,593	-		CCNA_02949	0.54	-1.1
3,109,642	+		CCNA_02949	0.61	+0.8
3,109,648	+		CCNA_02949	0.62	-0.3
3,109,650	-		CCNA_02949	0.62	-0.3
3,109,734	+		CCNA_02949	0.75	-0.9
3,109,743	+		CCNA_02949	0.77	-0.1
3,109,743	+		CCNA_02949	0.77	+0.3
3,109,743	+		CCNA_02949	0.77	+0.5
3,109,743	+		CCNA_02949	0.77	-0.3
3,109,743	+		CCNA_02949	0.77	-0.2
3,109,743	+		CCNA_02949	0.77	+0.4
3,109,751	-		CCNA_02949	0.78	-1.5
3,109,751	-		CCNA_02949	0.78	-0.7
3,109,751	-		CCNA_02949	0.78	-0.4
3,109,808	+		CCNA_02949	0.87	+0.7
3,109,839	-				+1.2
3,109,848	-				-0.9
3,109,887	+				-2.4
3,109,951	-				-0.4
3,109,978	+				+0.0
3,109,984	+				-0.1
3,110,004	+				+0.2
3,110,023	+		CCNA_02950	0.11	+0.0
3,110,029	+		CCNA_02950	0.11	-0.2
3,110,088	-		CCNA_02950	0.16	+0.9
3,110,116	-		CCNA_02950	0.18	+0.3
3,110,148	+		CCNA_02950	0.20	+0.9
3,110,230	+		CCNA_02950	0.27	+0.6
3,110,299	+		CCNA_02950	0.32	-0.7
3,110,324	+		CCNA_02950	0.34	+0.3
3,110,378	+		CCNA_02950	0.39	+0.2
3,110,407	+		CCNA_02950	0.41	+0.4
3,110,412	+		CCNA_02950	0.41	+0.0
3,110,412	+		CCNA_02950	0.41	-0.1
3,110,420	-		CCNA_02950	0.42	-1.5
3,110,456	-		CCNA_02950	0.45	+0.4
3,110,456	-		CCNA_02950	0.45	+0.6
3,110,483	-		CCNA_02950	0.47	+0.7
3,110,496	-		CCNA_02950	0.48	+1.4
3,110,540	-		CCNA_02950	0.51	+0.4
3,110,542	-		CCNA_02950	0.52	+0.0
3,110,548	+		CCNA_02950	0.52	+0.6
3,110,558	+		CCNA_02950	0.53	+0.2
3,110,558	+		CCNA_02950	0.53	+0.5
3,110,558	+		CCNA_02950	0.53	-0.5
3,110,558	+		CCNA_02950	0.53	+0.4
3,110,561	-		CCNA_02950	0.53	+0.6
3,110,566	-		CCNA_02950	0.54	+0.8
3,110,590	-		CCNA_02950	0.55	-0.4
3,110,605	+		CCNA_02950	0.57	-0.1
3,110,642	+		CCNA_02950	0.60	-0.3
3,110,669	+		CCNA_02950	0.62	-2.3
3,110,669	+		CCNA_02950	0.62	-0.3
3,110,677	-		CCNA_02950	0.62	+0.2
3,110,721	+		CCNA_02950	0.66	+0.4
3,110,797	-		CCNA_02950	0.72	+0.7
3,110,809	+		CCNA_02950	0.73	-0.3
3,110,809	+		CCNA_02950	0.73	+0.1
3,110,809	+		CCNA_02950	0.73	+0.7
3,110,809	+		CCNA_02950	0.73	-0.2
3,110,809	+		CCNA_02950	0.73	-0.2
3,110,809	+		CCNA_02950	0.73	-0.2
3,110,811	+		CCNA_02950	0.73	+0.1
3,110,811	+		CCNA_02950	0.73	-0.0
3,110,851	-		CCNA_02950	0.76	-0.3