Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_02069
Experiment: PYE with CHIR-090 40 ug/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | PYE with CHIR-090 40 ug/mL |
---|---|---|---|---|---|
remove | |||||
2,218,866 | - | CCNA_02067 | 0.10 | +1.6 | |
2,218,902 | + | CCNA_02067 | 0.16 | -0.5 | |
2,218,904 | - | CCNA_02067 | 0.17 | +1.4 | |
2,218,904 | - | CCNA_02067 | 0.17 | +0.0 | |
2,218,973 | - | CCNA_02067 | 0.28 | +0.3 | |
2,218,997 | + | CCNA_02067 | 0.32 | -0.2 | |
2,219,010 | - | CCNA_02067 | 0.34 | +0.0 | |
2,219,018 | + | CCNA_02067 | 0.35 | -1.9 | |
2,219,018 | + | CCNA_02067 | 0.35 | +0.3 | |
2,219,049 | - | CCNA_02067 | 0.40 | -0.1 | |
2,219,073 | - | CCNA_02067 | 0.44 | +0.4 | |
2,219,075 | - | CCNA_02067 | 0.44 | +0.1 | |
2,219,126 | + | CCNA_02067 | 0.53 | -0.6 | |
2,219,153 | - | CCNA_02067 | 0.57 | +0.5 | |
2,219,249 | - | CCNA_02067 | 0.73 | +1.1 | |
2,219,368 | - | +0.4 | |||
2,219,528 | + | -0.6 | |||
2,219,554 | + | CCNA_02068 | 0.12 | +1.5 | |
2,219,562 | - | CCNA_02068 | 0.14 | +0.8 | |
2,219,588 | + | CCNA_02068 | 0.21 | -0.1 | |
2,219,627 | - | CCNA_02068 | 0.32 | +0.3 | |
2,219,654 | + | CCNA_02068 | 0.40 | -0.2 | |
2,219,659 | + | CCNA_02068 | 0.42 | -0.6 | |
2,219,659 | + | CCNA_02068 | 0.42 | -1.4 | |
2,219,724 | + | CCNA_02068 | 0.60 | +0.6 | |
2,220,821 | - | +0.4 |
Or see this region's nucleotide sequence