Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01501

Experiment: PYE with CHIR-090 40 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 40 ug/mL
1,610,947	+		CCNA_01500	0.15	+0.2
1,610,955	-		CCNA_01500	0.16	+0.6
1,610,955	-		CCNA_01500	0.16	+0.4
1,611,015	+		CCNA_01500	0.21	-0.1
1,611,070	+		CCNA_01500	0.26	-0.2
1,611,078	-		CCNA_01500	0.27	-0.4
1,611,131	-		CCNA_01500	0.31	+0.2
1,611,255	+		CCNA_01500	0.42	-0.6
1,611,272	+		CCNA_01500	0.44	+0.1
1,611,280	-		CCNA_01500	0.44	-0.4
1,611,286	+		CCNA_01500	0.45	+0.5
1,611,308	-		CCNA_01500	0.47	-0.7
1,611,366	-		CCNA_01500	0.52	-0.4
1,611,447	-		CCNA_01500	0.59	-0.8
1,611,461	+		CCNA_01500	0.60	+0.1
1,611,531	-		CCNA_01500	0.66	-0.8
1,611,581	-		CCNA_01500	0.70	-1.6
1,611,597	+		CCNA_01500	0.72	+2.2
1,611,627	-		CCNA_01500	0.74	+0.8
1,611,674	+		CCNA_01500	0.78	-0.1
1,611,674	+		CCNA_01500	0.78	+0.2
1,611,675	+		CCNA_01500	0.79	+0.7
1,611,682	-		CCNA_01500	0.79	+0.4
1,611,682	-		CCNA_01500	0.79	-0.8
1,611,682	-		CCNA_01500	0.79	+2.3
1,611,737	+		CCNA_01500	0.84	-0.1
1,611,763	+		CCNA_01500	0.86	+0.2
1,611,771	+		CCNA_01500	0.87	+0.6
1,611,771	-		CCNA_01500	0.87	+0.4
1,611,802	+		CCNA_01500	0.90	-0.4
1,611,824	-				-0.5
1,611,826	+				-0.1
1,611,834	-				+0.1
1,611,899	-				+0.3
1,611,911	-				+1.6
1,611,916	-				-0.1
1,611,981	+		CCNA_01501	0.25	-0.7
1,612,012	+		CCNA_01501	0.33	-1.3
1,612,026	-		CCNA_01501	0.36	-1.2
1,612,042	-		CCNA_01501	0.41	+1.1
1,612,098	+		CCNA_01501	0.55	+0.0
1,612,112	-		CCNA_01501	0.59	-0.0
1,612,121	-		CCNA_01501	0.61	-0.8
1,612,142	+		CCNA_01501	0.67	-0.7
1,612,164	+		CCNA_01501	0.73	-1.6
1,612,215	-		CCNA_01501	0.86	-1.3
1,612,248	+				-1.2
1,612,282	-				-0.1
1,612,286	-				-0.1
1,612,286	-				-0.4
1,612,286	-				-0.4
1,612,312	+				+1.0
1,612,320	-				-0.5
1,612,338	+				-1.3
1,612,389	+		CCNA_01503	0.12	-0.1
1,612,435	+		CCNA_01503	0.16	+0.9
1,612,435	+		CCNA_01503	0.16	-1.1
1,612,443	-		CCNA_01503	0.17	-0.6
1,612,465	-		CCNA_01503	0.19	+0.8
1,612,470	+		CCNA_01503	0.19	-0.8
1,612,507	-		CCNA_01503	0.22	-0.7
1,612,507	-		CCNA_01503	0.22	+0.6
1,612,585	+		CCNA_01503	0.30	+0.2
1,612,585	+		CCNA_01503	0.30	+0.3
1,612,593	-		CCNA_01503	0.30	-0.9
1,612,593	-		CCNA_01503	0.30	-0.5
1,612,659	-		CCNA_01503	0.36	-0.2
1,612,659	-		CCNA_01503	0.36	-0.1
1,612,689	+		CCNA_01503	0.39	+0.2
1,612,711	+		CCNA_01503	0.41	-0.2
1,612,716	+		CCNA_01503	0.42	-1.3
1,612,787	-		CCNA_01503	0.48	-0.4
1,612,787	-		CCNA_01503	0.48	-1.9
1,612,820	+		CCNA_01503	0.51	+0.2
1,612,820	+		CCNA_01503	0.51	-1.5
1,612,825	+		CCNA_01503	0.52	-1.5
1,612,828	-		CCNA_01503	0.52	-0.8
1,612,859	+		CCNA_01503	0.55	-1.3
1,612,865	+		CCNA_01503	0.55	-1.1
1,612,874	-		CCNA_01503	0.56	-0.6
1,612,906	+		CCNA_01503	0.59	+0.6
1,612,906	+		CCNA_01503	0.59	-0.1
1,612,925	+		CCNA_01503	0.61	-0.7
1,613,023	-		CCNA_01503	0.70	-1.8
1,613,023	-		CCNA_01503	0.70	-0.3
1,613,028	-		CCNA_01503	0.71	-0.1
1,613,043	+		CCNA_01503	0.72	+0.2
1,613,065	-		CCNA_01503	0.74	-0.6
1,613,092	+		CCNA_01503	0.76	-0.4
1,613,100	-		CCNA_01503	0.77	+0.6
1,613,110	+		CCNA_01503	0.78	-1.4
1,613,115	+		CCNA_01503	0.79	+0.3
1,613,208	+		CCNA_01503	0.87	+0.3
1,613,216	-		CCNA_01503	0.88	-0.4
1,613,216	-		CCNA_01503	0.88	-2.4
1,613,216	-		CCNA_01503	0.88	+1.1
1,613,216	-		CCNA_01503	0.88	+0.3
1,613,257	-				+0.8