Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01283

Experiment: PYE with CHIR-090 40 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 40 ug/mL
1,408,658	-				+0.9
1,408,676	+				+0.5
1,408,699	-				-0.0
1,408,704	-				-0.3
1,408,728	+				-0.3
1,408,776	+		CCNA_01282	0.14	-0.5
1,408,817	-		CCNA_01282	0.18	-0.1
1,408,830	-		CCNA_01282	0.20	+0.2
1,408,852	+		CCNA_01282	0.22	-1.0
1,408,862	-		CCNA_01282	0.23	-1.4
1,408,874	+		CCNA_01282	0.24	-0.1
1,408,885	+		CCNA_01282	0.25	-0.4
1,408,932	+		CCNA_01282	0.29	-1.0
1,408,940	-		CCNA_01282	0.30	+0.2
1,408,940	-		CCNA_01282	0.30	+0.0
1,409,003	+		CCNA_01282	0.36	-0.3
1,409,011	-		CCNA_01282	0.37	-0.1
1,409,041	+		CCNA_01282	0.40	-3.0
1,409,209	+		CCNA_01282	0.56	+0.6
1,409,218	-		CCNA_01282	0.57	-0.0
1,409,224	-		CCNA_01282	0.57	-0.7
1,409,364	+		CCNA_01282	0.71	-0.8
1,409,364	+		CCNA_01282	0.71	+0.3
1,409,364	+		CCNA_01282	0.71	+0.2
1,409,364	-		CCNA_01282	0.71	+0.6
1,409,365	-		CCNA_01282	0.71	-2.5
1,409,371	+		CCNA_01282	0.71	+0.5
1,409,372	-		CCNA_01282	0.72	-1.1
1,409,418	+		CCNA_01282	0.76	+0.2
1,409,426	-		CCNA_01282	0.77	+0.4
1,409,426	-		CCNA_01282	0.77	+1.7
1,409,436	-		CCNA_01282	0.78	+0.7
1,409,436	-		CCNA_01282	0.78	-1.1
1,409,511	+		CCNA_01282	0.85	-0.4
1,409,796	+		CCNA_01283	0.18	-1.2
1,409,801	+		CCNA_01283	0.19	+0.2
1,409,833	-		CCNA_01283	0.22	-1.3
1,409,833	-		CCNA_01283	0.22	-1.2
1,409,844	+		CCNA_01283	0.22	-0.6
1,409,857	+		CCNA_01283	0.24	+0.4
1,409,862	+		CCNA_01283	0.24	-0.3
1,409,862	+		CCNA_01283	0.24	-2.5
1,409,883	+		CCNA_01283	0.26	+0.6
1,409,883	+		CCNA_01283	0.26	-0.1
1,409,941	-		CCNA_01283	0.31	-0.2
1,409,993	+		CCNA_01283	0.35	-0.2
1,410,005	-		CCNA_01283	0.36	+0.0
1,410,006	+		CCNA_01283	0.36	-0.5
1,410,020	-		CCNA_01283	0.37	-0.0
1,410,037	+		CCNA_01283	0.39	+0.1
1,410,046	+		CCNA_01283	0.39	-0.8
1,410,163	-		CCNA_01283	0.49	+0.5
1,410,177	+		CCNA_01283	0.50	-1.0
1,410,273	-		CCNA_01283	0.58	+0.2
1,410,346	+		CCNA_01283	0.64	-0.7
1,410,346	+		CCNA_01283	0.64	-0.7
1,410,346	+		CCNA_01283	0.64	-0.5
1,410,397	-		CCNA_01283	0.69	-0.3
1,410,410	-		CCNA_01283	0.70	-1.5
1,410,512	+		CCNA_01283	0.78	+0.1
1,410,520	-		CCNA_01283	0.79	-0.3
1,410,527	-		CCNA_01283	0.80	-0.3
1,410,555	+		CCNA_01283	0.82	-0.1
1,410,569	-		CCNA_01283	0.83	-1.1
1,410,582	-		CCNA_01283	0.84	-0.4
1,410,595	-		CCNA_01283	0.85	-1.4
1,410,615	+		CCNA_01283	0.87	+0.6
1,410,659	-				+0.2
1,410,719	-				-0.4
1,410,760	+				+0.5
1,410,787	-		CCNA_01284	0.14	+2.3
1,410,790	+		CCNA_01284	0.14	-1.9
1,410,832	-		CCNA_01284	0.18	-0.7
1,410,867	-		CCNA_01284	0.22	-0.8
1,410,902	-		CCNA_01284	0.26	-1.1
1,410,913	-		CCNA_01284	0.27	+0.5
1,410,945	-		CCNA_01284	0.30	-0.8
1,410,972	+		CCNA_01284	0.33	-2.1
1,411,026	+		CCNA_01284	0.39	+0.8
1,411,035	-		CCNA_01284	0.40	+0.0
1,411,035	-		CCNA_01284	0.40	-0.7
1,411,035	-		CCNA_01284	0.40	+0.0
1,411,037	+		CCNA_01284	0.40	-0.4
1,411,052	-		CCNA_01284	0.42	-0.1
1,411,060	-		CCNA_01284	0.43	-0.6
1,411,060	-		CCNA_01284	0.43	-0.4
1,411,060	-		CCNA_01284	0.43	-0.5
1,411,085	-		CCNA_01284	0.45	-1.3
1,411,099	-		CCNA_01284	0.47	-0.0
1,411,137	+		CCNA_01284	0.51	-2.3
1,411,139	-		CCNA_01284	0.51	-1.0
1,411,251	+		CCNA_01284	0.63	-0.2
1,411,296	-		CCNA_01284	0.67	-0.2
1,411,296	-		CCNA_01284	0.67	-1.1
1,411,323	+		CCNA_01284	0.70	-0.3
1,411,323	+		CCNA_01284	0.70	-1.9
1,411,336	-		CCNA_01284	0.72	+2.1
1,411,412	+		CCNA_01284	0.80	-0.1
1,411,415	-		CCNA_01284	0.80	+0.4
1,411,447	+		CCNA_01284	0.83	+0.1
1,411,474	+		CCNA_01284	0.86	+0.7
1,411,482	-		CCNA_01284	0.87	-0.0
1,411,484	+		CCNA_01284	0.87	-1.4
1,411,504	+		CCNA_01284	0.89	+0.3
1,411,525	+				+0.7
1,411,545	-				-0.2
1,411,588	+				-0.2
1,411,624	-				-0.1
1,411,633	-				+1.3
1,411,647	+				-0.8
1,411,649	+				+0.2
1,411,657	+				-0.4
1,411,664	+				-1.2
1,411,665	-				-0.1
1,411,672	-				+0.0
1,411,672	-				+0.7
1,411,677	+				-0.4
1,411,677	+				+0.0
1,411,685	-				+1.4
1,411,694	-				+0.3
1,411,749	-		CCNA_01285	0.15	-0.1