Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01260

Experiment: PYE with CHIR-090 40 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 40 ug/mL
1,386,143	+				+0.4
1,386,147	+				-0.7
1,386,160	-				+1.3
1,386,173	+				-1.8
1,386,239	-				-0.1
1,386,255	+				+0.4
1,386,288	+				+0.4
1,386,303	+				+0.9
1,386,343	+				+1.3
1,386,344	-				+0.2
1,386,375	-				+0.2
1,386,425	+		CCNA_01259	0.13	-0.3
1,386,501	-		CCNA_01259	0.23	-1.0
1,386,525	-		CCNA_01259	0.26	-1.5
1,386,529	+		CCNA_01259	0.26	-0.1
1,386,536	+		CCNA_01259	0.27	+0.2
1,386,542	+		CCNA_01259	0.28	+0.3
1,386,544	-		CCNA_01259	0.28	+0.9
1,386,551	-		CCNA_01259	0.29	-0.2
1,386,555	-		CCNA_01259	0.30	-0.6
1,386,555	-		CCNA_01259	0.30	+0.2
1,386,561	-		CCNA_01259	0.30	-0.2
1,386,584	+		CCNA_01259	0.33	-0.3
1,386,589	+		CCNA_01259	0.34	-0.6
1,386,602	-		CCNA_01259	0.36	-0.6
1,386,657	+		CCNA_01259	0.43	-0.4
1,386,667	+		CCNA_01259	0.44	+0.4
1,386,673	-		CCNA_01259	0.45	-1.6
1,386,673	-		CCNA_01259	0.45	-2.1
1,386,789	+		CCNA_01259	0.60	-0.6
1,386,853	+		CCNA_01259	0.68	+0.5
1,386,902	-		CCNA_01259	0.74	-3.3
1,386,970	+		CCNA_01259	0.83	+0.2
1,387,025	+				+1.2
1,387,050	-				+0.3
1,387,055	-				+0.9
1,387,105	+				-0.1
1,387,115	+				-0.3
1,387,234	-		CCNA_01260	0.13	+0.1
1,387,342	+		CCNA_01260	0.27	+0.2
1,387,359	-		CCNA_01260	0.29	+1.4
1,387,383	+		CCNA_01260	0.33	-0.4
1,387,431	+		CCNA_01260	0.39	+0.1
1,387,431	+		CCNA_01260	0.39	-0.3
1,387,431	+		CCNA_01260	0.39	+2.7
1,387,439	-		CCNA_01260	0.40	-0.4
1,387,439	-		CCNA_01260	0.40	+0.3
1,387,475	+		CCNA_01260	0.45	+0.1
1,387,475	+		CCNA_01260	0.45	+0.1
1,387,475	+		CCNA_01260	0.45	+0.2
1,387,475	+		CCNA_01260	0.45	-0.6
1,387,475	+		CCNA_01260	0.45	-0.4
1,387,483	-		CCNA_01260	0.46	-0.3
1,387,483	-		CCNA_01260	0.46	-0.5
1,387,483	-		CCNA_01260	0.46	-1.8
1,387,483	-		CCNA_01260	0.46	+0.0
1,387,503	-		CCNA_01260	0.49	+0.2
1,387,512	+		CCNA_01260	0.50	-0.1
1,387,528	+		CCNA_01260	0.52	+0.7
1,387,528	+		CCNA_01260	0.52	-1.1
1,387,533	+		CCNA_01260	0.53	-0.5
1,387,533	+		CCNA_01260	0.53	-0.3
1,387,546	-		CCNA_01260	0.54	-0.7
1,387,546	-		CCNA_01260	0.54	-0.0
1,387,592	-		CCNA_01260	0.61	+0.3
1,387,596	+		CCNA_01260	0.61	-1.7
1,387,609	-		CCNA_01260	0.63	+0.2
1,387,609	-		CCNA_01260	0.63	+0.7
1,387,609	-		CCNA_01260	0.63	-0.1
1,387,643	-		CCNA_01260	0.67	-0.5
1,387,649	+		CCNA_01260	0.68	+1.0
1,387,653	-		CCNA_01260	0.69	-1.2
1,387,661	+		CCNA_01260	0.70	+0.2
1,387,667	+		CCNA_01260	0.71	+1.5
1,387,673	+		CCNA_01260	0.71	-0.3
1,387,673	+		CCNA_01260	0.71	-0.6
1,387,675	-		CCNA_01260	0.72	-1.3
1,387,675	-		CCNA_01260	0.72	-0.4
1,387,681	-		CCNA_01260	0.72	-2.5
1,387,681	-		CCNA_01260	0.72	-2.0
1,387,701	-		CCNA_01260	0.75	-0.8
1,387,704	+		CCNA_01260	0.75	-0.0
1,387,705	+		CCNA_01260	0.76	-0.1
1,387,710	+		CCNA_01260	0.76	+0.1
1,387,710	+		CCNA_01260	0.76	-0.1
1,387,713	-		CCNA_01260	0.77	-2.4
1,387,718	-		CCNA_01260	0.77	-0.2
1,387,718	-		CCNA_01260	0.77	-0.8
1,387,718	-		CCNA_01260	0.77	+1.5
1,387,718	-		CCNA_01260	0.77	-0.6
1,387,841	-				+1.6
1,387,879	+				-0.3
1,387,900	+				-0.7
1,387,936	+				-0.2
1,387,936	+				-0.7
1,387,936	+				-0.0
1,387,936	+				-0.5
1,387,936	+				-0.5
1,387,936	+				+0.0
1,387,936	+				+0.0
1,387,936	+				-0.1
1,387,936	+				-0.5
1,387,936	+				-0.6
1,387,944	-				-1.0
1,387,944	-				-1.9
1,387,944	-				-0.6
1,387,944	-				+0.8
1,387,944	-				-1.2
1,387,944	-				-1.4
1,387,944	-				+0.2
1,387,944	-				-3.0
1,387,944	-				+0.4
1,387,944	-				+0.0
1,387,944	-				-2.3
1,387,965	+				-0.0
1,387,973	-				+0.6
1,388,039	-				-0.5
1,388,044	-				-1.1
1,388,133	+		CCNA_01261	0.11	-0.6
1,388,133	+		CCNA_01261	0.11	+0.3
1,388,133	+		CCNA_01261	0.11	-0.0
1,388,133	+		CCNA_01261	0.11	+0.5
1,388,133	+		CCNA_01261	0.11	+0.7
1,388,133	+		CCNA_01261	0.11	+0.5
1,388,141	-		CCNA_01261	0.12	-0.5
1,388,141	-		CCNA_01261	0.12	-1.4
1,388,141	-		CCNA_01261	0.12	-1.0
1,388,141	-		CCNA_01261	0.12	-1.5
1,388,202	-		CCNA_01261	0.18	-0.5
1,388,217	+		CCNA_01261	0.19	+0.6
1,388,240	-		CCNA_01261	0.21	-1.6
1,388,252	-		CCNA_01261	0.22	-1.1
1,388,286	+		CCNA_01261	0.25	+0.6
1,388,286	+		CCNA_01261	0.25	+0.5
1,388,294	-		CCNA_01261	0.26	-2.6
1,388,294	-		CCNA_01261	0.26	-2.3
1,388,294	-		CCNA_01261	0.26	-1.1
1,388,294	-		CCNA_01261	0.26	-0.6
1,388,314	+		CCNA_01261	0.28	+0.3
1,388,316	-		CCNA_01261	0.28	-1.0
1,388,317	-		CCNA_01261	0.28	+0.3
1,388,359	+		CCNA_01261	0.32	+0.2
1,388,396	+		CCNA_01261	0.35	-0.0
1,388,404	-		CCNA_01261	0.36	-0.8
1,388,416	+		CCNA_01261	0.37	+0.6
1,388,431	+		CCNA_01261	0.38	+0.8
1,388,449	-		CCNA_01261	0.40	+0.3
1,388,464	+		CCNA_01261	0.41	+0.4
1,388,585	-		CCNA_01261	0.52	-0.4
1,388,592	+		CCNA_01261	0.53	+0.9
1,388,592	+		CCNA_01261	0.53	+0.9
1,388,643	-		CCNA_01261	0.57	-0.6
1,388,798	-		CCNA_01261	0.71	+0.7
1,388,824	+		CCNA_01261	0.73	+0.1
1,388,824	+		CCNA_01261	0.73	+0.4
1,388,832	-		CCNA_01261	0.74	+0.3
1,388,864	+		CCNA_01261	0.77	+0.5
1,388,872	+		CCNA_01261	0.78	-0.1
1,388,880	-		CCNA_01261	0.78	-1.4