Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_00927

Experiment: PYE with CHIR-090 40 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 40 ug/mL
1,002,822	+		CCNA_00926	0.16	+0.2
1,002,822	+		CCNA_00926	0.16	+0.1
1,002,830	-		CCNA_00926	0.17	+0.2
1,002,848	+		CCNA_00926	0.19	+0.2
1,002,854	+		CCNA_00926	0.19	+0.2
1,002,861	+		CCNA_00926	0.20	+0.3
1,002,862	-		CCNA_00926	0.20	+0.4
1,002,863	-		CCNA_00926	0.20	-0.2
1,002,863	-		CCNA_00926	0.20	-0.3
1,002,880	-		CCNA_00926	0.22	+0.9
1,002,945	+		CCNA_00926	0.29	-0.1
1,002,964	+		CCNA_00926	0.31	+0.2
1,002,984	-		CCNA_00926	0.33	-0.1
1,002,995	+		CCNA_00926	0.34	+1.7
1,003,015	+		CCNA_00926	0.36	-1.1
1,003,015	-		CCNA_00926	0.36	-0.8
1,003,030	-		CCNA_00926	0.38	-0.3
1,003,030	-		CCNA_00926	0.38	-0.3
1,003,030	-		CCNA_00926	0.38	-0.1
1,003,052	+		CCNA_00926	0.40	+0.1
1,003,065	-		CCNA_00926	0.41	+0.2
1,003,065	-		CCNA_00926	0.41	-1.6
1,003,065	-		CCNA_00926	0.41	-0.5
1,003,130	+		CCNA_00926	0.48	-2.1
1,003,141	-		CCNA_00926	0.49	-0.8
1,003,156	-		CCNA_00926	0.51	+1.0
1,003,156	-		CCNA_00926	0.51	-1.2
1,003,237	+		CCNA_00926	0.59	+0.3
1,003,255	+		CCNA_00926	0.61	+0.5
1,003,263	-		CCNA_00926	0.62	+1.4
1,003,263	-		CCNA_00926	0.62	+0.4
1,003,263	-		CCNA_00926	0.62	+1.1
1,003,266	+		CCNA_00926	0.62	+0.5
1,003,279	-		CCNA_00926	0.63	+0.7
1,003,310	+		CCNA_00926	0.66	-0.3
1,003,321	+		CCNA_00926	0.67	-0.2
1,003,356	+		CCNA_00926	0.71	+0.1
1,003,364	-		CCNA_00926	0.72	-0.5
1,003,364	-		CCNA_00926	0.72	+1.5
1,003,364	-		CCNA_00926	0.72	-0.4
1,003,366	-		CCNA_00926	0.72	+0.4
1,003,377	+		CCNA_00926	0.73	-0.5
1,003,377	+		CCNA_00926	0.73	-0.2
1,003,377	+		CCNA_00926	0.73	-0.4
1,003,377	+		CCNA_00926	0.73	-0.2
1,003,382	+		CCNA_00926	0.74	+0.4
1,003,385	-		CCNA_00926	0.74	-0.6
1,003,385	-		CCNA_00926	0.74	-1.5
1,003,385	-		CCNA_00926	0.74	-0.0
1,003,385	-		CCNA_00926	0.74	+1.6
1,003,385	-		CCNA_00926	0.74	+0.4
1,003,385	-		CCNA_00926	0.74	+0.3
1,003,385	-		CCNA_00926	0.74	+0.5
1,003,398	+		CCNA_00926	0.75	-1.0
1,003,421	+		CCNA_00926	0.78	+1.7
1,003,421	+		CCNA_00926	0.78	+0.2
1,003,431	+		CCNA_00926	0.79	+0.4
1,003,431	+		CCNA_00926	0.79	+0.1
1,003,447	+		CCNA_00926	0.80	-0.2
1,003,455	-		CCNA_00926	0.81	+0.7
1,003,500	+		CCNA_00926	0.86	-0.2
1,003,567	-				-0.4
1,003,582	-				-0.4
1,003,615	+				-0.2
1,003,629	-				+0.8
1,003,629	-				+0.3
1,003,629	-				-0.7
1,003,701	+				-1.4
1,003,701	+				-1.1
1,003,701	+				-0.8
1,003,701	+				-2.6
1,003,701	+				-0.8
1,003,709	-				+0.7
1,003,709	-				+0.1
1,003,724	+				-2.9
1,003,729	+				-0.4
1,003,732	-				-0.4
1,003,791	-				+0.4
1,003,846	+				+0.5
1,003,849	-				-0.2
1,003,849	-				+1.8
1,003,854	-				-0.3
1,003,854	-				-1.2
1,003,854	-				-0.2
1,003,854	-				-0.1
1,003,865	-				-0.4
1,003,878	-		CCNA_00927	0.12	-0.1
1,003,879	-		CCNA_00927	0.12	-0.3
1,003,923	+		CCNA_00927	0.19	+1.4
1,003,972	-		CCNA_00927	0.27	-2.0
1,003,973	-		CCNA_00927	0.27	+0.4
1,004,064	-		CCNA_00927	0.42	-0.9
1,004,127	+		CCNA_00927	0.53	-0.3
1,004,154	-		CCNA_00927	0.57	+0.1
1,004,159	+		CCNA_00927	0.58	-0.6
1,004,177	-		CCNA_00927	0.61	-0.2
1,004,192	-		CCNA_00927	0.63	-0.8
1,004,192	-		CCNA_00927	0.63	-1.7
1,004,192	-		CCNA_00927	0.63	-1.2
1,004,274	+		CCNA_00927	0.76	-0.0
1,004,274	+		CCNA_00927	0.76	-0.9
1,004,274	+		CCNA_00927	0.76	+0.1
1,004,274	+		CCNA_00927	0.76	-0.0
1,004,282	-		CCNA_00927	0.78	-0.2
1,004,282	-		CCNA_00927	0.78	-1.3
1,004,292	-		CCNA_00927	0.79	+0.2
1,004,294	+		CCNA_00927	0.80	-1.5
1,004,302	-		CCNA_00927	0.81	-2.7
1,004,307	+		CCNA_00927	0.82	-1.4
1,004,322	+		CCNA_00927	0.84	+0.1
1,004,337	-		CCNA_00927	0.87	-0.2
1,004,353	+		CCNA_00927	0.89	-0.3
1,004,355	+		CCNA_00927	0.90	-2.6
1,004,458	+				-1.0
1,004,464	-				+0.3
1,004,527	+		CCNA_00928	0.15	+0.7
1,004,527	+		CCNA_00928	0.15	-0.7
1,004,527	+		CCNA_00928	0.15	-0.1
1,004,535	-		CCNA_00928	0.16	-0.5
1,004,600	+		CCNA_00928	0.25	-2.1
1,004,608	-		CCNA_00928	0.27	+0.4
1,004,610	-		CCNA_00928	0.27	+1.7
1,004,610	-		CCNA_00928	0.27	+1.3
1,004,626	+		CCNA_00928	0.29	-1.1
1,004,634	-		CCNA_00928	0.31	+0.2
1,004,639	-		CCNA_00928	0.31	-0.6
1,004,648	+		CCNA_00928	0.33	-0.1
1,004,673	-		CCNA_00928	0.36	-0.3
1,004,700	-		CCNA_00928	0.40	-0.7
1,004,701	-		CCNA_00928	0.40	-1.4
1,004,828	-		CCNA_00928	0.59	-1.1
1,004,848	+		CCNA_00928	0.62	+1.1
1,004,849	-		CCNA_00928	0.62	+0.2
1,004,856	-		CCNA_00928	0.63	-0.5
1,004,914	+		CCNA_00928	0.72	-1.0
1,004,914	+		CCNA_00928	0.72	+2.4
1,004,922	-		CCNA_00928	0.73	-0.3
1,004,922	-		CCNA_00928	0.73	-0.3
1,004,942	+		CCNA_00928	0.76	-1.4
1,005,043	-				+0.5
1,005,049	-				-0.1
1,005,075	+				-2.0
1,005,080	+				+1.7
1,005,085	+				-0.6
1,005,085	+				+0.1
1,005,088	-				-0.3
1,005,088	-				-0.1
1,005,088	-				-0.5
1,005,088	-				+0.8
1,005,097	+				-0.0
1,005,132	+				+0.1
1,005,133	+				+1.7
1,005,141	-				+2.1
1,005,145	+				+0.7
1,005,168	-				-2.0
1,005,170	-				+0.0
1,005,170	-				-0.3
1,005,176	+				-0.1
1,005,182	-				+0.5
1,005,183	+				-0.7
1,005,190	-				-1.3
1,005,257	+				-0.6
1,005,291	-				-0.8
1,005,313	+				-0.6
1,005,327	-				-0.4
1,005,357	-		CCNA_00929	0.11	-0.2
1,005,364	-		CCNA_00929	0.12	+0.2
1,005,364	-		CCNA_00929	0.12	+0.4
1,005,369	-		CCNA_00929	0.12	+0.0
1,005,377	-		CCNA_00929	0.13	-0.3