Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_16760

Experiment: marine broth

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine broth
3,906,420	-		CA264_16750	0.65	+0.0
3,906,430	+		CA264_16750	0.66	+0.4
3,906,434	+		CA264_16750	0.66	-0.2
3,906,434	+		CA264_16750	0.66	-0.2
3,906,434	+		CA264_16750	0.66	+0.3
3,906,434	+		CA264_16750	0.66	+0.7
3,906,435	-		CA264_16750	0.66	-0.1
3,906,435	-		CA264_16750	0.66	+0.4
3,906,435	-		CA264_16750	0.66	+0.0
3,906,439	-		CA264_16750	0.66	-0.6
3,906,442	+		CA264_16750	0.66	-0.8
3,906,453	+		CA264_16750	0.67	-0.3
3,906,484	-		CA264_16750	0.69	+0.8
3,906,510	+		CA264_16750	0.71	+1.1
3,906,533	+		CA264_16750	0.72	-0.3
3,906,534	-		CA264_16750	0.72	+0.7
3,906,546	-		CA264_16750	0.73	+1.5
3,906,556	+		CA264_16750	0.73	-0.3
3,906,600	+		CA264_16750	0.76	+0.6
3,906,601	-		CA264_16750	0.76	-0.1
3,906,601	-		CA264_16750	0.76	-0.2
3,906,682	-		CA264_16750	0.81	-0.1
3,906,682	-		CA264_16750	0.81	+1.0
3,906,714	+		CA264_16750	0.83	-0.5
3,906,714	+		CA264_16750	0.83	+0.0
3,906,715	-		CA264_16750	0.83	-0.0
3,906,716	+		CA264_16750	0.83	+0.3
3,906,716	+		CA264_16750	0.83	-0.2
3,906,716	+		CA264_16750	0.83	+0.1
3,906,716	+		CA264_16750	0.83	-0.2
3,906,716	+		CA264_16750	0.83	+0.5
3,906,716	+		CA264_16750	0.83	+0.7
3,906,717	-		CA264_16750	0.83	-0.6
3,906,717	-		CA264_16750	0.83	+0.2
3,906,720	+		CA264_16750	0.84	-0.1
3,906,721	-		CA264_16750	0.84	+0.0
3,906,723	+		CA264_16750	0.84	-0.1
3,906,778	-		CA264_16750	0.87	-0.1
3,906,786	+		CA264_16750	0.88	+0.3
3,906,819	-		CA264_16750	0.90	-0.4
3,906,826	-				+0.1
3,906,991	+				-0.5
3,906,992	-				+0.0
3,906,996	+				-0.8
3,907,064	-				-0.2
3,907,077	+				-0.9
3,907,078	-				-1.0
3,907,081	+				-0.8
3,907,091	+				+0.4
3,907,093	+				-1.3
3,907,093	+				-0.5
3,907,094	-				-1.0
3,907,112	+				-0.3
3,907,112	+				+0.6
3,907,112	+				-0.3
3,907,112	+				+0.6
3,907,113	-				-0.1
3,907,113	-				-0.0
3,907,123	+				+0.9
3,907,123	+				-0.8
3,907,318	-				+0.8
3,907,402	+				+0.0
3,907,472	+				-0.9
3,907,473	-				+0.1
3,907,571	+				-0.3
3,907,575	-				-1.0
3,907,601	+		CA264_16760	0.11	-1.2
3,907,618	-		CA264_16760	0.12	-0.7
3,907,851	+		CA264_16760	0.25	-0.6
3,907,852	-		CA264_16760	0.25	-0.9
3,907,852	-		CA264_16760	0.25	-1.0
3,907,852	-		CA264_16760	0.25	-0.4
3,907,856	+		CA264_16760	0.25	+0.4
3,907,943	+		CA264_16760	0.30	+0.5
3,907,974	-		CA264_16760	0.32	+0.8
3,907,985	+		CA264_16760	0.32	+0.0
3,907,985	+		CA264_16760	0.32	+0.1
3,907,985	+		CA264_16760	0.32	-0.1
3,907,986	-		CA264_16760	0.33	-0.1
3,908,038	+		CA264_16760	0.35	-0.3
3,908,050	+		CA264_16760	0.36	-0.5
3,908,050	+		CA264_16760	0.36	-0.5
3,908,074	-		CA264_16760	0.37	-0.2
3,908,103	+		CA264_16760	0.39	+0.0
3,908,104	-		CA264_16760	0.39	-1.6
3,908,104	-		CA264_16760	0.39	-1.0
3,908,105	+		CA264_16760	0.39	-0.2
3,908,105	+		CA264_16760	0.39	-0.1
3,908,109	-		CA264_16760	0.39	+0.0
3,908,227	-		CA264_16760	0.46	-0.5
3,908,291	-		CA264_16760	0.49	-0.9
3,908,291	-		CA264_16760	0.49	-0.7
3,908,292	+		CA264_16760	0.49	+2.1
3,908,293	-		CA264_16760	0.49	+0.4
3,908,405	+		CA264_16760	0.55	-1.7
3,908,408	+		CA264_16760	0.56	+0.1
3,908,408	+		CA264_16760	0.56	-1.6
3,908,409	-		CA264_16760	0.56	+0.6
3,908,411	+		CA264_16760	0.56	-0.1
3,908,411	+		CA264_16760	0.56	-0.7
3,908,464	+		CA264_16760	0.59	-0.6
3,908,464	+		CA264_16760	0.59	-0.3
3,908,465	-		CA264_16760	0.59	-0.8
3,908,465	-		CA264_16760	0.59	-0.8
3,908,468	+		CA264_16760	0.59	-0.5
3,908,469	-		CA264_16760	0.59	-1.3
3,908,536	+		CA264_16760	0.63	-0.2
3,908,547	-		CA264_16760	0.63	-0.2
3,908,547	-		CA264_16760	0.63	-0.3
3,908,598	+		CA264_16760	0.66	+0.1
3,908,598	+		CA264_16760	0.66	-0.2
3,908,599	-		CA264_16760	0.66	-1.9
3,908,603	+		CA264_16760	0.66	-0.2
3,908,603	+		CA264_16760	0.66	-0.9
3,908,603	+		CA264_16760	0.66	+0.2
3,908,603	+		CA264_16760	0.66	-0.8
3,908,603	+		CA264_16760	0.66	-0.2
3,908,604	-		CA264_16760	0.66	-1.4
3,908,604	-		CA264_16760	0.66	-0.2
3,908,604	-		CA264_16760	0.66	+0.2
3,908,649	+		CA264_16760	0.69	-2.5
3,908,659	+		CA264_16760	0.69	-0.7
3,908,661	+		CA264_16760	0.70	-0.8
3,908,662	-		CA264_16760	0.70	-0.7
3,908,665	+		CA264_16760	0.70	-0.1
3,908,740	+		CA264_16760	0.74	-0.1
3,908,740	+		CA264_16760	0.74	-0.9
3,908,741	-		CA264_16760	0.74	+0.6
3,908,741	-		CA264_16760	0.74	-0.4
3,908,744	+		CA264_16760	0.74	+0.0
3,908,745	-		CA264_16760	0.74	-0.9
3,908,745	-		CA264_16760	0.74	-1.9
3,908,745	-		CA264_16760	0.74	-0.1
3,908,898	-		CA264_16760	0.83	+1.2
3,908,901	+		CA264_16760	0.83	-0.2
3,908,901	+		CA264_16760	0.83	-1.7
3,908,901	+		CA264_16760	0.83	-0.7
3,908,902	-		CA264_16760	0.83	-0.3
3,908,902	-		CA264_16760	0.83	-1.7
3,908,902	-		CA264_16760	0.83	-0.8
3,908,924	+		CA264_16760	0.84	-0.2
3,908,925	-		CA264_16760	0.84	-0.6
3,908,946	-		CA264_16760	0.85	-0.3
3,909,212	+				+0.3
3,909,233	+				+0.2
3,909,234	-				-0.1
3,909,254	+				-1.2
3,909,254	+				+0.4
3,909,316	+				-0.3
3,909,382	+				-0.2
3,909,382	+				-0.4
3,909,383	-				-0.2
3,909,437	+				+1.6
3,909,590	+		CA264_16765	0.15	-0.3
3,909,640	-		CA264_16765	0.19	-1.0
3,909,669	+		CA264_16765	0.22	-0.2
3,909,874	+		CA264_16765	0.40	+1.2
3,909,875	-		CA264_16765	0.40	+0.1
3,909,884	-		CA264_16765	0.41	+0.3
3,910,043	-		CA264_16765	0.55	-0.8
3,910,121	+		CA264_16765	0.62	-0.4
3,910,194	-		CA264_16765	0.68	-0.3
3,910,194	-		CA264_16765	0.68	-0.7
3,910,194	-		CA264_16765	0.68	-0.2
3,910,194	-		CA264_16765	0.68	-2.3
3,910,203	+		CA264_16765	0.69	-0.4