Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_15335

Experiment: marine broth

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine broth
3,588,815	+		CA264_15330	0.33	+0.1
3,588,816	-		CA264_15330	0.33	-0.1
3,588,816	-		CA264_15330	0.33	-0.2
3,588,819	+		CA264_15330	0.34	-0.1
3,588,819	+		CA264_15330	0.34	+0.2
3,588,819	+		CA264_15330	0.34	-0.1
3,588,820	-		CA264_15330	0.34	+0.4
3,588,829	-		CA264_15330	0.34	-0.1
3,588,847	+		CA264_15330	0.36	-0.8
3,588,847	+		CA264_15330	0.36	+0.3
3,588,848	-		CA264_15330	0.36	-0.3
3,588,848	-		CA264_15330	0.36	-0.9
3,588,851	+		CA264_15330	0.36	+0.2
3,588,852	-		CA264_15330	0.36	-0.7
3,588,852	-		CA264_15330	0.36	+0.2
3,588,865	+		CA264_15330	0.37	+0.7
3,588,869	+		CA264_15330	0.37	+0.1
3,588,870	-		CA264_15330	0.37	-0.9
3,588,876	+		CA264_15330	0.38	+0.3
3,588,880	+		CA264_15330	0.38	-0.5
3,588,880	+		CA264_15330	0.38	-0.2
3,588,907	+		CA264_15330	0.40	+1.0
3,588,944	+		CA264_15330	0.42	-0.7
3,588,998	+		CA264_15330	0.46	+1.1
3,589,008	-		CA264_15330	0.47	-1.6
3,589,034	+		CA264_15330	0.48	+1.4
3,589,034	+		CA264_15330	0.48	+0.2
3,589,034	+		CA264_15330	0.48	+0.1
3,589,034	+		CA264_15330	0.48	+0.0
3,589,060	-		CA264_15330	0.50	-0.8
3,589,067	+		CA264_15330	0.51	-0.1
3,589,103	+		CA264_15330	0.53	+0.5
3,589,130	+		CA264_15330	0.55	+0.2
3,589,131	-		CA264_15330	0.55	-0.1
3,589,131	-		CA264_15330	0.55	-0.5
3,589,131	-		CA264_15330	0.55	-0.0
3,589,131	-		CA264_15330	0.55	+0.6
3,589,133	+		CA264_15330	0.55	+1.9
3,589,134	-		CA264_15330	0.55	-0.1
3,589,134	-		CA264_15330	0.55	-0.4
3,589,152	+		CA264_15330	0.56	+0.2
3,589,160	+		CA264_15330	0.57	+0.4
3,589,195	+		CA264_15330	0.59	+0.1
3,589,196	-		CA264_15330	0.59	-0.5
3,589,196	-		CA264_15330	0.59	-0.8
3,589,271	+		CA264_15330	0.65	+1.0
3,589,272	-		CA264_15330	0.65	+0.2
3,589,323	-		CA264_15330	0.68	-1.4
3,589,323	-		CA264_15330	0.68	+0.1
3,589,360	+		CA264_15330	0.71	+0.0
3,589,364	+		CA264_15330	0.71	+0.2
3,589,365	-		CA264_15330	0.71	-1.4
3,589,365	-		CA264_15330	0.71	-0.4
3,589,386	-		CA264_15330	0.72	-0.1
3,589,387	+		CA264_15330	0.73	+0.3
3,589,483	-		CA264_15330	0.79	+1.4
3,589,532	+		CA264_15330	0.82	-0.1
3,589,574	+		CA264_15330	0.85	-0.9
3,589,574	+		CA264_15330	0.85	+0.8
3,589,574	+		CA264_15330	0.85	-0.5
3,589,577	+		CA264_15330	0.86	+0.1
3,589,834	+				-0.7
3,589,835	-				-0.9
3,589,908	+				+0.5
3,589,989	-				-0.1
3,590,040	+				+0.4
3,590,040	+				+0.3
3,590,040	+				+0.3
3,590,041	-				+0.4
3,590,041	-				-0.5
3,590,074	+				+0.1
3,590,074	+				+0.4
3,590,075	-				-0.6
3,590,077	+				+0.4
3,590,077	+				+0.1
3,590,077	+				+0.3
3,590,077	+				+0.4
3,590,077	+				+0.3
3,590,077	+				+0.3
3,590,077	+				+0.9
3,590,077	+				+0.2
3,590,077	+				+0.2
3,590,078	-				+0.4
3,590,078	-				-0.0
3,590,078	-				-0.0
3,590,078	-				+0.0
3,590,078	-				+0.7
3,590,078	-				-0.3
3,590,127	+		CA264_15335	0.10	+0.9
3,590,128	-		CA264_15335	0.10	+0.2
3,590,151	-		CA264_15335	0.11	-0.3
3,590,171	+		CA264_15335	0.11	+0.1
3,590,172	-		CA264_15335	0.11	-0.0
3,590,236	+		CA264_15335	0.13	+0.7
3,590,236	+		CA264_15335	0.13	+0.7
3,590,237	-		CA264_15335	0.13	+0.1
3,590,265	+		CA264_15335	0.14	-0.0
3,590,265	+		CA264_15335	0.14	+0.6
3,590,312	+		CA264_15335	0.16	-0.1
3,590,313	-		CA264_15335	0.16	-0.3
3,590,313	-		CA264_15335	0.16	-1.3
3,590,313	-		CA264_15335	0.16	+0.1
3,590,336	-		CA264_15335	0.16	+0.2
3,590,337	+		CA264_15335	0.17	+0.4
3,590,378	-		CA264_15335	0.18	-0.1
3,590,381	-		CA264_15335	0.18	+1.0
3,590,393	-		CA264_15335	0.18	-0.3
3,590,418	+		CA264_15335	0.19	+0.1
3,590,419	-		CA264_15335	0.19	+0.5
3,590,421	+		CA264_15335	0.19	+0.1
3,590,421	+		CA264_15335	0.19	-0.4
3,590,545	+		CA264_15335	0.23	-0.2
3,590,545	+		CA264_15335	0.23	+0.0
3,590,546	-		CA264_15335	0.23	+0.5
3,590,546	-		CA264_15335	0.23	-0.5
3,590,548	-		CA264_15335	0.23	-0.3
3,590,548	-		CA264_15335	0.23	+0.4
3,590,551	+		CA264_15335	0.23	-0.3
3,590,565	-		CA264_15335	0.24	+0.5
3,590,599	+		CA264_15335	0.25	+0.9
3,590,600	-		CA264_15335	0.25	-0.9
3,590,607	-		CA264_15335	0.25	-0.6
3,590,607	-		CA264_15335	0.25	+0.5
3,590,608	+		CA264_15335	0.25	+0.4
3,590,609	-		CA264_15335	0.25	+0.3
3,590,609	-		CA264_15335	0.25	-0.2
3,590,655	-		CA264_15335	0.26	-0.3
3,590,701	-		CA264_15335	0.28	+0.9
3,590,705	-		CA264_15335	0.28	-0.1
3,590,731	+		CA264_15335	0.29	+0.4
3,590,766	+		CA264_15335	0.30	+0.2
3,590,767	-		CA264_15335	0.30	+0.4
3,590,772	-		CA264_15335	0.30	-0.6
3,590,816	+		CA264_15335	0.31	-0.4
3,590,817	-		CA264_15335	0.31	+0.4
3,590,817	-		CA264_15335	0.31	+0.6
3,590,817	-		CA264_15335	0.31	+0.9
3,590,817	-		CA264_15335	0.31	+0.3
3,590,882	+		CA264_15335	0.33	-0.0
3,590,882	+		CA264_15335	0.33	+1.5
3,590,899	-		CA264_15335	0.34	-0.5
3,590,899	-		CA264_15335	0.34	-1.0
3,590,917	-		CA264_15335	0.34	-1.0
3,590,925	+		CA264_15335	0.35	-0.0
3,590,925	+		CA264_15335	0.35	+0.0
3,590,965	-		CA264_15335	0.36	+0.2
3,590,968	+		CA264_15335	0.36	+0.5
3,590,969	-		CA264_15335	0.36	+0.0
3,590,985	+		CA264_15335	0.36	+0.1
3,590,985	+		CA264_15335	0.36	+0.3
3,590,986	-		CA264_15335	0.36	+0.2
3,590,990	-		CA264_15335	0.37	-0.9
3,591,031	+		CA264_15335	0.38	+0.8
3,591,032	-		CA264_15335	0.38	-0.2
3,591,048	+		CA264_15335	0.38	+0.4
3,591,049	-		CA264_15335	0.38	+0.2
3,591,055	-		CA264_15335	0.39	+1.4
3,591,064	+		CA264_15335	0.39	+0.1
3,591,065	-		CA264_15335	0.39	+0.2
3,591,079	+		CA264_15335	0.39	+0.6
3,591,080	-		CA264_15335	0.39	+0.1
3,591,092	+		CA264_15335	0.40	+0.4
3,591,129	+		CA264_15335	0.41	+0.3
3,591,153	+		CA264_15335	0.42	-0.2
3,591,198	-		CA264_15335	0.43	+0.5
3,591,199	+		CA264_15335	0.43	+1.5
3,591,254	-		CA264_15335	0.45	+1.9
3,591,269	-		CA264_15335	0.45	+0.7
3,591,271	+		CA264_15335	0.45	+0.1
3,591,272	-		CA264_15335	0.45	+0.7
3,591,319	+		CA264_15335	0.47	+0.1
3,591,320	-		CA264_15335	0.47	+0.0
3,591,400	-		CA264_15335	0.49	+0.1
3,591,400	-		CA264_15335	0.49	-1.1
3,591,407	+		CA264_15335	0.49	+0.7
3,591,415	+		CA264_15335	0.50	+0.5
3,591,415	+		CA264_15335	0.50	-1.6
3,591,428	+		CA264_15335	0.50	+0.1
3,591,428	+		CA264_15335	0.50	+1.1
3,591,429	-		CA264_15335	0.50	-0.1
3,591,429	-		CA264_15335	0.50	-0.3
3,591,453	+		CA264_15335	0.51	-0.4
3,591,453	+		CA264_15335	0.51	+0.4
3,591,498	-		CA264_15335	0.52	+0.4
3,591,552	+		CA264_15335	0.54	+0.1
3,591,553	-		CA264_15335	0.54	+0.4
3,591,553	-		CA264_15335	0.54	-0.0
3,591,553	-		CA264_15335	0.54	-0.1
3,591,587	-		CA264_15335	0.55	+0.7
3,591,589	-		CA264_15335	0.55	+0.4
3,591,589	-		CA264_15335	0.55	+0.9
3,591,651	+		CA264_15335	0.57	+0.2
3,591,652	-		CA264_15335	0.57	+0.7
3,591,652	-		CA264_15335	0.57	+0.0
3,591,684	-		CA264_15335	0.58	+1.3
3,591,758	+		CA264_15335	0.60	+0.7
3,591,759	-		CA264_15335	0.60	+1.1
3,591,759	-		CA264_15335	0.60	-0.5
3,591,810	+		CA264_15335	0.62	+0.1
3,591,811	-		CA264_15335	0.62	-0.0
3,591,811	-		CA264_15335	0.62	-0.2
3,591,811	-		CA264_15335	0.62	+1.7
3,591,811	-		CA264_15335	0.62	+0.6
3,591,814	+		CA264_15335	0.62	+0.5
3,591,814	+		CA264_15335	0.62	+0.6
3,591,814	+		CA264_15335	0.62	+0.3
3,591,815	-		CA264_15335	0.62	+0.3
3,591,844	+		CA264_15335	0.63	+0.1
3,591,847	+		CA264_15335	0.63	+0.0
3,591,847	+		CA264_15335	0.63	+0.8
3,591,848	-		CA264_15335	0.63	+0.1
3,591,848	-		CA264_15335	0.63	+0.7
3,591,862	+		CA264_15335	0.63	+0.7
3,591,886	-		CA264_15335	0.64	+2.1
3,591,890	+		CA264_15335	0.64	+0.2
3,591,890	+		CA264_15335	0.64	-0.7
3,591,890	+		CA264_15335	0.64	+0.4
3,591,891	-		CA264_15335	0.64	+0.0
3,591,891	-		CA264_15335	0.64	+0.3
3,591,891	-		CA264_15335	0.64	-0.3
3,591,924	-		CA264_15335	0.65	-2.1
3,591,948	+		CA264_15335	0.66	+0.2
3,591,961	-		CA264_15335	0.66	-0.5
3,591,968	-		CA264_15335	0.67	-0.4
3,592,011	+		CA264_15335	0.68	+0.6
3,592,012	-		CA264_15335	0.68	+0.5
3,592,186	-		CA264_15335	0.73	+0.1
3,592,189	+		CA264_15335	0.73	-1.0
3,592,190	-		CA264_15335	0.73	+1.0
3,592,213	-		CA264_15335	0.74	-1.2
3,592,213	-		CA264_15335	0.74	+0.2
3,592,228	+		CA264_15335	0.75	+0.1
3,592,228	+		CA264_15335	0.75	+1.0
3,592,229	-		CA264_15335	0.75	+0.6
3,592,229	-		CA264_15335	0.75	-0.4
3,592,229	-		CA264_15335	0.75	-0.2
3,592,232	-		CA264_15335	0.75	+0.3
3,592,233	+		CA264_15335	0.75	+0.6
3,592,234	-		CA264_15335	0.75	+0.4
3,592,234	-		CA264_15335	0.75	+1.8
3,592,280	+		CA264_15335	0.76	+0.8
3,592,280	+		CA264_15335	0.76	+0.8
3,592,280	+		CA264_15335	0.76	+0.8
3,592,286	+		CA264_15335	0.76	+0.2
3,592,289	-		CA264_15335	0.76	-0.2
3,592,363	+		CA264_15335	0.79	+0.5
3,592,363	+		CA264_15335	0.79	+0.1
3,592,363	+		CA264_15335	0.79	-1.5
3,592,454	+		CA264_15335	0.82	-0.0
3,592,455	-		CA264_15335	0.82	+0.0
3,592,456	+		CA264_15335	0.82	-0.4
3,592,456	+		CA264_15335	0.82	+0.6
3,592,480	+		CA264_15335	0.82	+0.2
3,592,481	-		CA264_15335	0.82	-0.4
3,592,505	+		CA264_15335	0.83	+0.6
3,592,565	-		CA264_15335	0.85	+0.8
3,592,567	+		CA264_15335	0.85	+1.1
3,592,567	+		CA264_15335	0.85	+0.4
3,592,568	-		CA264_15335	0.85	+0.0
3,592,568	-		CA264_15335	0.85	+0.6
3,592,675	+		CA264_15335	0.88	+0.7
3,592,675	+		CA264_15335	0.88	-0.5
3,592,681	+		CA264_15335	0.89	-0.9
3,592,682	-		CA264_15335	0.89	+0.6
3,592,730	+				+1.4
3,592,731	-				+0.7
3,592,760	+				+0.1
3,592,778	+				+0.8
3,592,778	+				+0.2
3,592,823	+				-0.4
3,592,824	-				-0.5
3,592,824	-				+0.2
3,592,835	+				-1.4
3,592,873	-				+1.2
3,592,901	+				+0.3
3,592,902	-				+0.4
3,592,917	-				+0.1
3,592,961	+				+0.2
3,592,961	+				+0.5
3,592,962	-				+0.1
3,592,965	-				-1.0
3,592,975	+				-0.3
3,593,039	+				-1.0
3,593,067	+				-0.1
3,593,081	-				-1.1
3,593,081	-				+0.0
3,593,103	+				-0.1
3,593,103	+				+0.9
3,593,103	+				-0.2
3,593,104	-				-0.2
3,593,110	+				-0.3
3,593,111	-				+0.3
3,593,112	+				+0.7
3,593,115	+				+1.3
3,593,115	+				+1.4
3,593,117	+				-0.1
3,593,117	+				+0.9
3,593,146	+				+0.5
3,593,146	+				+1.4
3,593,146	+				+0.1
3,593,146	+				+0.4
3,593,147	-				-0.6
3,593,147	-				+0.2
3,593,159	+				+0.0
3,593,159	+				+0.8
3,593,159	+				+0.5
3,593,159	+				+0.6
3,593,177	+				+0.3
3,593,231	+		CA264_15340	0.37	-1.1
3,593,231	+		CA264_15340	0.37	+0.7
3,593,232	-		CA264_15340	0.38	-0.7
3,593,240	-		CA264_15340	0.42	+0.1
3,593,301	-		CA264_15340	0.73	+0.3
3,593,301	-		CA264_15340	0.73	-1.1
3,593,304	+		CA264_15340	0.75	+1.5
3,593,333	-				+0.3
3,593,390	+				-0.5
3,593,394	+				-0.2
3,593,434	+				-1.1
3,593,445	+				-1.1
3,593,461	+				+0.2
3,593,475	+				+0.0
3,593,483	+				-0.1
3,593,495	+				-0.0
3,593,497	+				-0.5
3,593,559	+				-0.0
3,593,645	-				+0.3
3,593,652	-				-0.1
3,593,737	+				-0.3
3,593,737	+				+0.3
3,593,737	+				-0.3
3,593,738	-				+0.4
3,593,902	+				-0.4
3,593,902	+				-0.2
3,593,902	+				+1.6
3,593,902	+				-1.2
3,593,933	+				+0.2
3,593,991	+				-1.1
3,593,992	-				-0.9
3,594,023	-				+0.5
3,594,023	-				-0.2
3,594,047	-				+1.0