Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_12370

Experiment: marine broth

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine broth
2,881,290	+		CA264_12365	0.46	+0.8
2,881,304	+		CA264_12365	0.47	-0.2
2,881,304	+		CA264_12365	0.47	-1.3
2,881,305	-				+0.8
2,881,312	-		CA264_12365	0.47	-0.9
2,881,336	+		CA264_12365	0.49	-0.1
2,881,341	+		CA264_12365	0.49	+1.2
2,881,375	-		CA264_12365	0.51	+1.5
2,881,375	-		CA264_12365	0.51	+1.4
2,881,386	+				+1.4
2,881,418	+		CA264_12365	0.53	-1.6
2,881,451	-		CA264_12365	0.55	+0.6
2,881,528	+		CA264_12365	0.59	+0.2
2,881,628	+		CA264_12365	0.64	+0.2
2,881,629	-		CA264_12365	0.64	+0.3
2,881,629	-		CA264_12365	0.64	+0.8
2,881,637	-		CA264_12365	0.65	-0.3
2,881,665	+		CA264_12365	0.66	+0.5
2,881,665	+		CA264_12365	0.66	+0.5
2,881,665	+		CA264_12365	0.66	+0.3
2,881,679	-		CA264_12365	0.67	+0.0
2,881,679	-		CA264_12365	0.67	+0.5
2,881,684	+		CA264_12365	0.67	+0.0
2,881,685	-		CA264_12365	0.68	-0.4
2,881,685	-		CA264_12365	0.68	+0.6
2,881,687	-		CA264_12365	0.68	-0.9
2,881,695	+		CA264_12365	0.68	-0.3
2,881,716	-		CA264_12365	0.69	+0.4
2,881,719	+		CA264_12365	0.69	-0.7
2,881,745	+		CA264_12365	0.71	+0.8
2,881,745	+		CA264_12365	0.71	+0.1
2,881,747	+		CA264_12365	0.71	+0.2
2,881,747	+		CA264_12365	0.71	+0.0
2,881,748	-		CA264_12365	0.71	-0.7
2,881,748	-		CA264_12365	0.71	-0.4
2,881,748	-		CA264_12365	0.71	-0.9
2,881,752	+		CA264_12365	0.71	-0.6
2,881,784	-		CA264_12365	0.73	+0.5
2,881,787	+		CA264_12365	0.73	+0.1
2,881,787	+		CA264_12365	0.73	+0.5
2,881,788	-				+0.8
2,881,790	-		CA264_12365	0.73	-0.1
2,881,790	-		CA264_12365	0.73	-0.4
2,881,791	+		CA264_12365	0.73	+1.8
2,881,792	-		CA264_12365	0.73	+0.4
2,881,792	-		CA264_12365	0.73	-0.6
2,881,839	-		CA264_12365	0.76	+1.3
2,881,842	+		CA264_12365	0.76	-0.2
2,881,842	+		CA264_12365	0.76	+0.1
2,881,842	+		CA264_12365	0.76	-0.1
2,881,843	-		CA264_12365	0.76	+1.3
2,881,843	-		CA264_12365	0.76	+1.1
2,881,864	-		CA264_12365	0.77	+0.3
2,881,865	+		CA264_12365	0.77	-0.1
2,881,865	+		CA264_12365	0.77	+0.6
2,881,865	+		CA264_12365	0.77	+0.2
2,881,865	+		CA264_12365	0.77	+2.4
2,881,983	+		CA264_12365	0.84	+0.1
2,881,985	+		CA264_12365	0.84	+0.0
2,881,985	+		CA264_12365	0.84	+0.5
2,881,985	+				+0.4
2,882,136	+				-0.0
2,882,137	-				+0.4
2,882,137	-				+1.3
2,882,185	+				+0.9
2,882,186	-				+1.3
2,882,212	+				-0.4
2,882,213	-				-0.2
2,882,235	+				-0.1
2,882,235	+				-0.7
2,882,235	+				-0.4
2,882,284	-				+2.1
2,882,284	-				+0.7
2,882,334	-				-0.7
2,882,342	-				-0.8
2,882,346	-				+0.1
2,882,371	+				+0.8
2,882,405	+		CA264_12370	0.13	+0.7
2,882,405	+		CA264_12370	0.13	-0.1
2,882,412	+				+0.8
2,882,417	+		CA264_12370	0.14	+0.1
2,882,461	+		CA264_12370	0.18	-0.4
2,882,474	+				+0.1
2,882,475	-		CA264_12370	0.20	-0.0
2,882,475	-		CA264_12370	0.20	+2.0
2,882,492	-		CA264_12370	0.21	+0.6
2,882,492	-				+0.4
2,882,497	-		CA264_12370	0.22	-0.2
2,882,566	-		CA264_12370	0.29	-1.2
2,882,566	-		CA264_12370	0.29	+0.3
2,882,625	+		CA264_12370	0.35	+0.1
2,882,631	+		CA264_12370	0.36	+0.4
2,882,631	+		CA264_12370	0.36	+0.2
2,882,632	-		CA264_12370	0.36	-0.4
2,882,645	+		CA264_12370	0.37	+1.3
2,882,657	-		CA264_12370	0.38	+0.1
2,882,680	-		CA264_12370	0.41	+0.3
2,882,698	+		CA264_12370	0.42	-1.5
2,882,698	+		CA264_12370	0.42	+0.3
2,882,698	+		CA264_12370	0.42	-0.2
2,882,699	-		CA264_12370	0.43	+1.6
2,882,699	-		CA264_12370	0.43	-0.3
2,882,702	+		CA264_12370	0.43	-1.3
2,882,702	+		CA264_12370	0.43	-0.4
2,882,772	+		CA264_12370	0.50	-0.1
2,882,772	+		CA264_12370	0.50	+1.3
2,882,773	-		CA264_12370	0.50	-0.2
2,882,773	-				+0.8
2,882,790	-		CA264_12370	0.52	+0.6
2,882,790	-		CA264_12370	0.52	-0.2
2,882,801	-		CA264_12370	0.53	+0.1
2,882,801	-		CA264_12370	0.53	+1.2
2,882,816	+		CA264_12370	0.54	+0.5
2,882,818	+		CA264_12370	0.55	+0.7
2,882,818	+		CA264_12370	0.55	-0.4
2,882,818	+		CA264_12370	0.55	+1.7
2,882,819	-		CA264_12370	0.55	-0.2
2,882,829	-		CA264_12370	0.56	-0.4
2,882,844	-		CA264_12370	0.57	+0.1
2,882,896	+		CA264_12370	0.63	+0.2
2,882,897	-		CA264_12370	0.63	+0.2
2,882,900	-				+2.4
2,882,902	-		CA264_12370	0.63	+0.1
2,882,966	+		CA264_12370	0.70	-0.7
2,882,967	-		CA264_12370	0.70	+0.3
2,882,968	+		CA264_12370	0.70	+0.3
2,882,969	-		CA264_12370	0.70	+0.3
2,882,982	+		CA264_12370	0.71	+0.8
2,883,014	-		CA264_12370	0.75	+0.7
2,883,031	+		CA264_12370	0.76	-1.5
2,883,031	+		CA264_12370	0.76	+0.2
2,883,032	-		CA264_12370	0.76	-0.4
2,883,038	-		CA264_12370	0.77	-0.5
2,883,077	+		CA264_12370	0.81	+0.8
2,883,077	+		CA264_12370	0.81	+1.3
2,883,082	+		CA264_12370	0.82	+0.1
2,883,082	+		CA264_12370	0.82	+1.8
2,883,115	+		CA264_12370	0.85	+0.3
2,883,116	-		CA264_12370	0.85	+0.0
2,883,127	+		CA264_12370	0.86	+1.5
2,883,159	-		CA264_12370	0.89	-0.8
2,883,178	+				+3.0
2,883,182	+				+0.8
2,883,240	-				+1.4
2,883,240	-				+0.3
2,883,240	-				+1.8
2,883,247	-				+0.3
2,883,271	+				+0.2
2,883,309	-				-0.7
2,883,321	+				+0.5
2,883,338	+				-0.1
2,883,346	-				-0.4
2,883,354	-				+0.2
2,883,376	-		CA264_12375	0.12	-0.7
2,883,378	+		CA264_12375	0.12	-1.5
2,883,379	-		CA264_12375	0.12	-0.6
2,883,379	-		CA264_12375	0.12	+0.1
2,883,403	-		CA264_12375	0.14	+0.2
2,883,497	+		CA264_12375	0.23	-1.7
2,883,498	-		CA264_12375	0.23	+0.7
2,883,510	+		CA264_12375	0.24	+1.6
2,883,553	+		CA264_12375	0.28	-0.6
2,883,566	+		CA264_12375	0.29	+1.1
2,883,567	-		CA264_12375	0.29	-0.6
2,883,569	+		CA264_12375	0.29	-1.0
2,883,570	-		CA264_12375	0.29	+0.0
2,883,570	-		CA264_12375	0.29	+1.4
2,883,570	-		CA264_12375	0.29	+1.4
2,883,595	-		CA264_12375	0.31	+0.8
2,883,783	+		CA264_12375	0.48	-0.4
2,883,783	+		CA264_12375	0.48	-1.6
2,883,783	+		CA264_12375	0.48	+0.8
2,883,866	+		CA264_12375	0.56	+0.4
2,883,870	+		CA264_12375	0.56	-0.6
2,883,871	-		CA264_12375	0.56	-0.6
2,883,878	+		CA264_12375	0.57	+0.3
2,883,936	+		CA264_12375	0.62	+0.8
2,883,936	+		CA264_12375	0.62	+0.6
2,883,937	-		CA264_12375	0.62	+0.3
2,883,939	+		CA264_12375	0.62	-0.2
2,884,010	+		CA264_12375	0.69	+1.1
2,884,019	+		CA264_12375	0.69	+2.3
2,884,025	+		CA264_12375	0.70	-0.3
2,884,041	+		CA264_12375	0.71	+1.2
2,884,041	+		CA264_12375	0.71	-0.4
2,884,046	+		CA264_12375	0.72	-0.4
2,884,047	-		CA264_12375	0.72	+0.8
2,884,100	+		CA264_12375	0.77	+0.1
2,884,101	-		CA264_12375	0.77	+1.1
2,884,101	-		CA264_12375	0.77	+0.2
2,884,116	+		CA264_12375	0.78	+2.0
2,884,117	-		CA264_12375	0.78	-0.7
2,884,117	-		CA264_12375	0.78	-1.6
2,884,118	+		CA264_12375	0.78	+0.1
2,884,118	+		CA264_12375	0.78	+0.1
2,884,121	-		CA264_12375	0.78	-0.9
2,884,156	-				+2.4
2,884,161	-		CA264_12375	0.82	+1.2
2,884,163	+				+1.7
2,884,182	-		CA264_12375	0.84	+0.4
2,884,185	+		CA264_12375	0.84	+0.4
2,884,240	+		CA264_12375	0.89	+0.4
2,884,246	+		CA264_12375	0.90	-0.8
2,884,246	+		CA264_12375	0.90	+0.4
2,884,247	-		CA264_12375	0.90	-0.4