Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_10205

Experiment: marine broth

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine broth
2,369,798	+		CA264_10200	0.10	+0.8
2,369,799	-		CA264_10200	0.10	+0.6
2,369,811	+		CA264_10200	0.12	+0.7
2,369,821	+		CA264_10200	0.12	-1.7
2,369,821	+		CA264_10200	0.12	-0.1
2,369,830	-		CA264_10200	0.13	-0.4
2,369,830	-		CA264_10200	0.13	-0.5
2,369,873	+		CA264_10200	0.17	-0.5
2,369,874	-		CA264_10200	0.17	+1.6
2,369,892	+		CA264_10200	0.19	+0.8
2,369,916	-		CA264_10200	0.21	-0.1
2,369,926	+		CA264_10200	0.22	-0.2
2,369,926	+		CA264_10200	0.22	-0.1
2,369,927	-		CA264_10200	0.22	-0.3
2,369,927	-		CA264_10200	0.22	+0.2
2,369,931	-		CA264_10200	0.23	+0.2
2,369,979	-		CA264_10200	0.27	-0.2
2,369,982	-		CA264_10200	0.28	+0.6
2,369,983	+		CA264_10200	0.28	-0.4
2,369,983	+		CA264_10200	0.28	-1.2
2,369,984	-		CA264_10200	0.28	+0.1
2,370,015	+		CA264_10200	0.31	+0.4
2,370,015	+		CA264_10200	0.31	-1.2
2,370,016	-		CA264_10200	0.31	+0.2
2,370,023	-		CA264_10200	0.31	+0.0
2,370,038	+		CA264_10200	0.33	+1.7
2,370,039	-		CA264_10200	0.33	-0.5
2,370,081	-		CA264_10200	0.37	+0.0
2,370,084	+		CA264_10200	0.37	-0.8
2,370,084	+		CA264_10200	0.37	-0.4
2,370,085	-		CA264_10200	0.37	-0.3
2,370,090	-		CA264_10200	0.38	+0.9
2,370,090	-		CA264_10200	0.38	+0.6
2,370,095	-		CA264_10200	0.38	-1.6
2,370,095	-		CA264_10200	0.38	+0.4
2,370,095	-		CA264_10200	0.38	+1.3
2,370,104	+		CA264_10200	0.39	+0.1
2,370,104	+		CA264_10200	0.39	-0.4
2,370,104	+		CA264_10200	0.39	-1.7
2,370,105	-		CA264_10200	0.39	+0.9
2,370,105	-		CA264_10200	0.39	+0.6
2,370,105	-		CA264_10200	0.39	-0.1
2,370,108	-		CA264_10200	0.39	+0.6
2,370,187	-		CA264_10200	0.47	+1.2
2,370,187	-		CA264_10200	0.47	+0.6
2,370,187	-		CA264_10200	0.47	+0.6
2,370,189	-		CA264_10200	0.47	+0.5
2,370,190	+		CA264_10200	0.47	-0.1
2,370,190	+		CA264_10200	0.47	+0.1
2,370,191	-		CA264_10200	0.47	-1.4
2,370,191	-		CA264_10200	0.47	+0.1
2,370,253	+		CA264_10200	0.53	-0.7
2,370,326	+		CA264_10200	0.60	+0.3
2,370,327	-		CA264_10200	0.60	+0.3
2,370,327	-		CA264_10200	0.60	+0.7
2,370,329	+		CA264_10200	0.60	-0.2
2,370,329	+		CA264_10200	0.60	-0.4
2,370,330	-		CA264_10200	0.60	-0.0
2,370,384	+		CA264_10200	0.65	+0.6
2,370,384	+		CA264_10200	0.65	-0.2
2,370,392	+		CA264_10200	0.66	+0.4
2,370,402	+		CA264_10200	0.67	-0.9
2,370,402	+		CA264_10200	0.67	-0.0
2,370,402	+		CA264_10200	0.67	+0.5
2,370,403	-		CA264_10200	0.67	+0.4
2,370,403	-		CA264_10200	0.67	-0.3
2,370,406	+		CA264_10200	0.67	+0.3
2,370,407	-		CA264_10200	0.67	+0.3
2,370,407	-		CA264_10200	0.67	+0.9
2,370,407	-		CA264_10200	0.67	-0.6
2,370,407	-		CA264_10200	0.67	-0.5
2,370,423	+		CA264_10200	0.69	-1.1
2,370,456	-		CA264_10200	0.72	+0.2
2,370,457	+		CA264_10200	0.72	-0.0
2,370,469	-		CA264_10200	0.73	+0.3
2,370,477	+		CA264_10200	0.74	+0.6
2,370,483	+		CA264_10200	0.74	-0.1
2,370,522	+		CA264_10200	0.78	-1.4
2,370,523	-		CA264_10200	0.78	-0.2
2,370,523	-		CA264_10200	0.78	+1.7
2,370,528	-		CA264_10200	0.79	+1.1
2,370,528	-		CA264_10200	0.79	+0.1
2,370,532	-		CA264_10200	0.79	+0.4
2,370,532	-		CA264_10200	0.79	+0.6
2,370,535	-		CA264_10200	0.79	+1.2
2,370,542	+		CA264_10200	0.80	+0.7
2,370,542	+		CA264_10200	0.80	-0.3
2,370,543	-		CA264_10200	0.80	+0.6
2,370,576	+		CA264_10200	0.83	-0.4
2,370,577	-		CA264_10200	0.83	+0.2
2,370,578	+		CA264_10200	0.83	+0.9
2,370,578	+		CA264_10200	0.83	-0.2
2,370,595	+		CA264_10200	0.85	+0.3
2,370,595	+		CA264_10200	0.85	-0.9
2,370,595	+		CA264_10200	0.85	+0.3
2,370,596	-		CA264_10200	0.85	+1.1
2,370,596	-		CA264_10200	0.85	+0.0
2,370,647	+		CA264_10200	0.90	+0.1
2,370,672	-				-0.3
2,370,684	+				-0.2
2,370,693	+				+0.7
2,370,693	+				-0.7
2,370,694	-				-0.2
2,370,716	+				+0.2
2,370,719	+				-0.6
2,370,719	+				+0.2
2,370,723	+				+0.0
2,370,724	-				+0.6
2,370,724	-				-0.4
2,370,724	-				+0.4
2,370,724	-				+1.1
2,370,724	-				-0.9
2,370,739	+				+0.5
2,370,739	+				-1.0
2,370,756	-				-0.5
2,370,761	+				+0.9
2,370,761	+				+0.5
2,370,761	+				-0.1
2,370,762	-				+0.1
2,370,765	+				+0.4
2,370,765	+				-0.3
2,370,766	-				-0.2
2,370,789	-				-1.0
2,370,793	+				-0.4
2,370,794	-				-0.2
2,370,805	+				-1.5
2,370,814	+				+0.5
2,370,814	+				-2.2
2,370,814	+				+0.1
2,370,816	+				+0.7
2,370,874	+		CA264_10205	0.12	+0.2
2,370,875	-		CA264_10205	0.12	-0.0
2,370,875	-		CA264_10205	0.12	-0.2
2,370,893	+		CA264_10205	0.14	-0.7
2,370,894	-		CA264_10205	0.14	+1.0
2,370,932	-		CA264_10205	0.19	+1.6
2,370,963	+		CA264_10205	0.22	-1.2
2,370,963	+		CA264_10205	0.22	+0.3
2,370,964	-		CA264_10205	0.22	+0.6
2,370,964	-		CA264_10205	0.22	-2.2
2,370,964	-		CA264_10205	0.22	-0.2
2,370,964	-		CA264_10205	0.22	-0.6
2,370,964	-		CA264_10205	0.22	+0.9
2,370,967	+		CA264_10205	0.23	-0.3
2,371,024	+		CA264_10205	0.29	-0.3
2,371,050	+		CA264_10205	0.32	+0.2
2,371,051	-		CA264_10205	0.32	-0.4
2,371,070	+		CA264_10205	0.35	-0.8
2,371,071	-		CA264_10205	0.35	+0.9
2,371,105	+		CA264_10205	0.39	-0.5
2,371,142	+		CA264_10205	0.43	+0.2
2,371,142	+		CA264_10205	0.43	-0.2
2,371,143	-		CA264_10205	0.43	+0.4
2,371,143	-		CA264_10205	0.43	+0.4
2,371,154	-		CA264_10205	0.44	+0.9
2,371,195	+		CA264_10205	0.49	+0.2
2,371,195	+		CA264_10205	0.49	-1.3
2,371,196	-		CA264_10205	0.49	+0.4
2,371,197	+		CA264_10205	0.49	+0.7
2,371,197	+		CA264_10205	0.49	+0.4
2,371,218	+		CA264_10205	0.52	-0.1
2,371,234	-		CA264_10205	0.53	-0.2
2,371,255	+		CA264_10205	0.56	+0.5
2,371,261	+		CA264_10205	0.57	+0.2
2,371,261	+		CA264_10205	0.57	+1.5
2,371,261	+		CA264_10205	0.57	-0.3
2,371,261	+		CA264_10205	0.57	-0.4
2,371,261	+		CA264_10205	0.57	+0.5
2,371,261	+		CA264_10205	0.57	-0.1
2,371,262	-		CA264_10205	0.57	+1.0
2,371,262	-		CA264_10205	0.57	-0.1
2,371,264	+		CA264_10205	0.57	+0.3
2,371,264	+		CA264_10205	0.57	-0.6
2,371,264	+		CA264_10205	0.57	-0.5
2,371,272	+		CA264_10205	0.58	+1.1
2,371,308	+		CA264_10205	0.62	+0.9
2,371,309	-		CA264_10205	0.62	+0.1
2,371,319	+		CA264_10205	0.63	+0.7
2,371,320	-		CA264_10205	0.63	-0.1
2,371,320	-		CA264_10205	0.63	-0.1
2,371,340	-		CA264_10205	0.66	+1.1
2,371,392	+		CA264_10205	0.72	-0.4
2,371,392	+		CA264_10205	0.72	+0.1
2,371,393	-		CA264_10205	0.72	+0.7
2,371,426	-		CA264_10205	0.76	-2.0
2,371,444	-		CA264_10205	0.78	-0.2
2,371,452	+		CA264_10205	0.79	+0.5
2,371,486	+		CA264_10205	0.82	+1.0
2,371,499	-		CA264_10205	0.84	+0.3
2,371,504	+		CA264_10205	0.84	+0.4
2,371,521	+		CA264_10205	0.86	+0.2
2,371,522	-		CA264_10205	0.87	+0.2
2,371,522	-		CA264_10205	0.87	+0.2
2,371,530	+		CA264_10205	0.87	+0.9
2,371,532	+		CA264_10205	0.88	+0.6
2,371,533	-		CA264_10205	0.88	-0.4
2,371,533	-		CA264_10205	0.88	+0.0
2,371,556	-				+0.0
2,371,556	-				+0.1
2,371,556	-				-0.1
2,371,562	-				-0.7
2,371,587	+				+0.6
2,371,638	+				-0.3
2,371,639	-				+0.5
2,371,690	+				-1.2
2,371,765	+				+0.6
2,371,765	+				-1.4
2,371,824	-				+0.3
2,371,829	+				-2.8
2,371,837	+				-0.5
2,371,837	+				-1.2
2,371,842	-				+0.3
2,371,845	+				-2.4
2,371,848	+				-0.5
2,371,879	+				-0.1
2,371,886	+				-0.4
2,371,916	+		CA264_10210	0.14	-0.8
2,371,954	+		CA264_10210	0.21	+0.1
2,371,981	+		CA264_10210	0.25	-0.0
2,371,981	+		CA264_10210	0.25	-0.6
2,371,981	+		CA264_10210	0.25	-0.4
2,371,981	+		CA264_10210	0.25	+0.2
2,371,982	-		CA264_10210	0.25	-1.8
2,372,004	+		CA264_10210	0.29	-0.3
2,372,004	+		CA264_10210	0.29	+0.4
2,372,004	+		CA264_10210	0.29	-1.0
2,372,005	-		CA264_10210	0.29	-0.3
2,372,005	-		CA264_10210	0.29	-2.4
2,372,015	-		CA264_10210	0.31	-1.7
2,372,092	+		CA264_10210	0.44	+0.4
2,372,092	+		CA264_10210	0.44	+0.1
2,372,092	+		CA264_10210	0.44	-0.3
2,372,092	+		CA264_10210	0.44	+0.1
2,372,093	-		CA264_10210	0.44	-1.3
2,372,096	+		CA264_10210	0.44	+0.1
2,372,096	+		CA264_10210	0.44	-0.8
2,372,096	+		CA264_10210	0.44	-0.2
2,372,096	+		CA264_10210	0.44	-2.0
2,372,096	+		CA264_10210	0.44	-0.6
2,372,102	+		CA264_10210	0.45	+0.2
2,372,102	+		CA264_10210	0.45	-0.4
2,372,102	+		CA264_10210	0.45	+0.6
2,372,103	-		CA264_10210	0.46	-2.2
2,372,116	+		CA264_10210	0.48	+0.1
2,372,117	-		CA264_10210	0.48	-0.4
2,372,125	+		CA264_10210	0.49	+0.2
2,372,235	+		CA264_10210	0.68	+0.7
2,372,235	+		CA264_10210	0.68	+0.4
2,372,236	-		CA264_10210	0.68	-0.3
2,372,254	+		CA264_10210	0.71	-0.3
2,372,254	+		CA264_10210	0.71	-0.1
2,372,254	+		CA264_10210	0.71	+1.0
2,372,257	+		CA264_10210	0.71	-0.6
2,372,269	+		CA264_10210	0.73	-0.3
2,372,270	-		CA264_10210	0.73	-0.1
2,372,410	+				-0.1
2,372,411	-				+1.0